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Lcy07g007690 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g007690
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionreplication protein A 70 kDa DNA-binding subunit E-like
Genome locationChr07:35431925..35432777
RNA-Seq ExpressionLcy07g007690
SyntenyLcy07g007690
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5512925.1 hypothetical protein RHGRI_038656 [Rhododendron griersonianum]2.1e-0439.34Show/hide
Query:  VQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGEV
        +Q  LFN++I+ F +   K+ SY I NG ++PV+ +Y NVH  +E+ L+  T +EK + E+
Subjt:  VQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGEV
XP_022155232.1 replication protein A 70 kDa DNA-binding subunit E-like [Momordica charantia]1.3e-1444.94Show/hide
Query:  CVQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGEVYNTKNQNMVDFFKSRRMINKQNLDICG
        C+QV LFN+LI+KF +  +K K+Y I++GNI+P+D+RY NVH++IEISLSQ ++++++EGE +    Q   DF     +++ Q++D+ G
Subjt:  CVQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGEVYNTKNQNMVDFFKSRRMINKQNLDICG
TrEMBL top hitse value%identityAlignment
A0A6J1DNS8 replication protein A 70 kDa DNA-binding subunit E-like6.3e-1544.94Show/hide
Query:  CVQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGEVYNTKNQNMVDFFKSRRMINKQNLDICG
        C+QV LFN+LI+KF +  +K K+Y I++GNI+P+D+RY NVH++IEISLSQ ++++++EGE +    Q   DF     +++ Q++D+ G
Subjt:  CVQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGEVYNTKNQNMVDFFKSRRMINKQNLDICG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G45400.1 Replication factor-A protein 1-related4.9e-0426.17Show/hide
Query:  VQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGE----VYNTKNQNMVDFFKSRRMINKQNLDICGEWSNPSIA
        ++VT FN+ +D+F +K      Y+I  GN++P    + ++    EI L   + I+  E +     Y+   +N+ D      M N    D+ G  S+ S  
Subjt:  VQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGE----VYNTKNQNMVDFFKSRRMINKQNLDICGEWSNPSIA

Query:  MVTLSKN
        +  + KN
Subjt:  MVTLSKN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATAGTGCATGTGTTCAGGTTACTTTATTCAATGAGCTCATTGATAAATTCAGTGAAAAACCTCAAAAGGATAAATCATATATGATCCATAACGGTAATATAGAACC
AGTAGATATTAGGTATCAAAATGTTCATGCAAGGATTGAGATCTCATTATCTCAGATGACTGAGATAGAAAAACTAGAAGGAGAAGTATACAACACAAAGAATCAAAATA
TGGTTGATTTTTTCAAATCCCGACGAATGATAAACAAGCAAAACTTAGATATATGTGGTGAGTGGAGTAATCCAAGTATTGCGATGGTTACATTATCAAAAAATACCCCT
AAACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCATAGTGCATGTGTTCAGGTTACTTTATTCAATGAGCTCATTGATAAATTCAGTGAAAAACCTCAAAAGGATAAATCATATATGATCCATAACGGTAATATAGAACC
AGTAGATATTAGGTATCAAAATGTTCATGCAAGGATTGAGATCTCATTATCTCAGATGACTGAGATAGAAAAACTAGAAGGAGAAGTATACAACACAAAGAATCAAAATA
TGGTTGATTTTTTCAAATCCCGACGAATGATAAACAAGCAAAACTTAGATATATGTGGTGAGTGGAGTAATCCAAGTATTGCGATGGTTACATTATCAAAAAATACCCCT
AAACTATGA
Protein sequenceShow/hide protein sequence
MHSACVQVTLFNELIDKFSEKPQKDKSYMIHNGNIEPVDIRYQNVHARIEISLSQMTEIEKLEGEVYNTKNQNMVDFFKSRRMINKQNLDICGEWSNPSIAMVTLSKNTP
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