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Lcy07g007730 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g007730
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr07:35503680..35504569
RNA-Seq ExpressionLcy07g007730
SyntenyLcy07g007730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7138490.1 hypothetical protein RHSIM_Rhsim07G0255600 [Rhododendron simsii]1.2e-1750.56Show/hide
Query:  FKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCN
        F+++T   +H C+R++ N+R +S +LAGKL+ +VK+QPN++L+ IQEK+  KFVV++S+SKAY  KR+A+++VEG+H +QY  L  YCN
Subjt:  FKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCN

KAF7153765.1 hypothetical protein RHSIM_Rhsim01G0020300 [Rhododendron simsii]1.3e-1952.13Show/hide
Query:  PSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCN
        P +I F+++T V +H C+RS+ N+R  S +L+ KL+N+VK+QPNIKL+ IQE++Q+K+VV +S+SKAY  KR+A++ VEG+HA+QY  L  YC+
Subjt:  PSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCN

KAG5121671.1 hypothetical protein JHK84_040011 [Glycine max]3.0e-1339.8Show/hide
Query:  FKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCNVRATKEQPW
        + M+T  +KH C+RS     A+S W+A KL+  +K  PN+ +  + +K+ +++ VK+S  KAYW +R A E V+GN+AKQY KL  Y N  + +   W
Subjt:  FKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCNVRATKEQPW

KAG5541483.1 hypothetical protein RHGRI_021341 [Rhododendron griersonianum]9.6e-2052.13Show/hide
Query:  PSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCN
        P +I F+++T V +H C+RS+ N+R  S +L+ KL+N+VK+QPNIKL+ IQE++Q+K+VV +S+SKAY  KR+A++ VEG+HA+QY  L  YC+
Subjt:  PSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYCN

XP_022153708.1 uncharacterized protein LOC111021158 [Momordica charantia]1.3e-1343.96Show/hide
Query:  EIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYC
        E+ ++++T V +H CSRSF N   TS WL  +++N VKEQP+I+L  IQEK+Q+K++ +++K KA+  K+ A+++V G+H +Q   L  YC
Subjt:  EIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYC

TrEMBL top hitse value%identityAlignment
A0A2N9EMB4 SWIM-type domain-containing protein5.0e-1433.18Show/hide
Query:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD
        +  D ++RD +Y+ + G+E E     +SD ++  + +   S  ++D+         P+  K ++ E   + N  +E      +  V G H     G  F+
Subjt:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD

Query:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE
         N +   R    K             E+  ++RT V++H CSRS+ N RATS WL  KL NR+ EQP++  +TIQEK+ +KFVV +S+SKAY  K+ A+E
Subjt:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE

Query:  MVEGNHAKQYGKLRIYC
         +EG+H +QY ++R YC
Subjt:  MVEGNHAKQYGKLRIYC

A0A2N9EQ17 CCHC-type domain-containing protein3.5e-1534.56Show/hide
Query:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD
        +  D N+RD +Y+ + G+E E     +SD E+  + +   S  ++D+         P+  K ++ E   + N  EE      +  V G H     G  F+
Subjt:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD

Query:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE
         N +   R    K             E+  ++RT V++H CSRS+ N RATS WL  KL NR+ EQP++  +TIQEK+ +KFVV +S+SKAY  K+ A+E
Subjt:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE

Query:  MVEGNHAKQYGKLRIYC
         +EG+H +QY ++R YC
Subjt:  MVEGNHAKQYGKLRIYC

A0A2N9FLE9 Uncharacterized protein5.0e-1433.18Show/hide
Query:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD
        +  D ++RD +Y+ + G+E E     +SD ++  + +   S  ++D+         P+  K ++ E   + N  +E      +  V G H     G  F+
Subjt:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD

Query:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE
         N +   R    K             E+  ++RT V++H CSRS+ N RATS WL  KL NR+ EQP++  +TIQEK+ +KFVV +S+SKAY  K+ A+E
Subjt:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE

Query:  MVEGNHAKQYGKLRIYC
         +EG+H +QY ++R YC
Subjt:  MVEGNHAKQYGKLRIYC

A0A2N9HUS0 Uncharacterized protein5.0e-1433.18Show/hide
Query:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD
        +  D ++RD +Y+ + G+E E     +SD ++  + +   S  ++D+         P+  K ++ E   + N  +E      +  V G H     G  F+
Subjt:  VHEDVNMRD-VYYEEAGVEHENENDQISDKED-NVDDISFSGSEEDLNDDL----EPRIVKDVEEEYREENNGEEEGDQCNNE--VDGEHDLDSMGEHFD

Query:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE
         N +   R    K             E+  ++RT V++H CSRS+ N RATS WL  KL NR+ EQP++  +TIQEK+ +KFVV +S+SKAY  K+ A+E
Subjt:  SNVENNSRFPSFKN-------TMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIE

Query:  MVEGNHAKQYGKLRIYC
         +EG+H +QY ++R YC
Subjt:  MVEGNHAKQYGKLRIYC

A0A6J1DI69 uncharacterized protein LOC1110211586.5e-1443.96Show/hide
Query:  EIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYC
        E+ ++++T V +H CSRSF N   TS WL  +++N VKEQP+I+L  IQEK+Q+K++ +++K KA+  K+ A+++V G+H +Q   L  YC
Subjt:  EIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKLRIYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAGCCGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTCGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTTTATTATGAAGAAGC
AGGAGTGGAGCATGAAAATGAAAATGACCAAATATCTGATAAAGAAGATAACGTAGATGACATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACCTA
GGATAGTCAAGGATGTTGAAGAGGAATATAGGGAAGAAAATAATGGTGAAGAAGAGGGTGATCAATGTAATAATGAGGTCGATGGTGAGCATGATTTAGATTCAATGGGA
GAACATTTTGATTCCAATGTGGAGAACAACTCTAGATTTCCATCATTTAAAAACACGATGGACCCTTCAGAAATTTGGTTTAAGATGAGGACTCCGGTTGATAAACACAT
TTGTAGTCGATCATTCGACAATCTTCGAGCAACTTCAAATTGGTTGGCTGGAAAACTATTGAATAGAGTTAAAGAGCAACCAAATATTAAATTGACTACAATTCAGGAGA
AGATCCAACAGAAATTTGTTGTCAAAGTCTCCAAGAGCAAGGCATATTGGGGTAAGAGAAAAGCAATTGAGATGGTAGAAGGGAACCATGCAAAGCAATATGGAAAACTA
AGAATTTATTGCAACGTACGAGCTACTAAGGAACAACCATGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATAGCCGCCTTAGCTTTAGTAAATGCAAATACATCCATTGATGTATTTGTCGAGCATGTAGTGCATGAAGATGTAAACATGAGAGATGTTTATTATGAAGAAGC
AGGAGTGGAGCATGAAAATGAAAATGACCAAATATCTGATAAAGAAGATAACGTAGATGACATATCATTTTCTGGTAGTGAGGAGGATTTAAATGATGATCTAGAACCTA
GGATAGTCAAGGATGTTGAAGAGGAATATAGGGAAGAAAATAATGGTGAAGAAGAGGGTGATCAATGTAATAATGAGGTCGATGGTGAGCATGATTTAGATTCAATGGGA
GAACATTTTGATTCCAATGTGGAGAACAACTCTAGATTTCCATCATTTAAAAACACGATGGACCCTTCAGAAATTTGGTTTAAGATGAGGACTCCGGTTGATAAACACAT
TTGTAGTCGATCATTCGACAATCTTCGAGCAACTTCAAATTGGTTGGCTGGAAAACTATTGAATAGAGTTAAAGAGCAACCAAATATTAAATTGACTACAATTCAGGAGA
AGATCCAACAGAAATTTGTTGTCAAAGTCTCCAAGAGCAAGGCATATTGGGGTAAGAGAAAAGCAATTGAGATGGTAGAAGGGAACCATGCAAAGCAATATGGAAAACTA
AGAATTTATTGCAACGTACGAGCTACTAAGGAACAACCATGGAAGTAG
Protein sequenceShow/hide protein sequence
MDIAALALVNANTSIDVFVEHVVHEDVNMRDVYYEEAGVEHENENDQISDKEDNVDDISFSGSEEDLNDDLEPRIVKDVEEEYREENNGEEEGDQCNNEVDGEHDLDSMG
EHFDSNVENNSRFPSFKNTMDPSEIWFKMRTPVDKHICSRSFDNLRATSNWLAGKLLNRVKEQPNIKLTTIQEKIQQKFVVKVSKSKAYWGKRKAIEMVEGNHAKQYGKL
RIYCNVRATKEQPWK