; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g007790 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g007790
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr07:35601772..35603611
RNA-Seq ExpressionLcy07g007790
SyntenyLcy07g007790
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]9.1e-4553.05Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKAYDRVEW F++++M +MGFH KW+ L+M C+ S  +SIL+NG   G+I P RGLRQGDP+SPY+FLLC+   SS++ +V     I+G+   + CPK+
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG
        +HLFFADD+L+FCKA+ ++  T   ILQ YE ASGQ +N DKS++FFS N   + R  +  MLG
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]1.2e-4452.44Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKA+DRVEW F++ +M ++GF  KW+ LIM+CV S  +S+L+NG   G I P RG+RQGDPLSP +FLLC++ LS++I E      I GI   + CP +
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG
        +HLFFADD+L+FCKA  ++     SIL +YE ASGQ +N DKS++FFSPN S + R ++ N+LG
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG

XP_023902041.1 uncharacterized protein LOC112013897 [Quercus suber]5.3e-4553.05Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKAYDRVEW F++++M +MGFH KW+ L+M C+ S  +SIL+NG   G+I P RGLRQGDP+SPY+FLLC+   SS++ +      I+G+   + CPK+
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG
        +HLFFADDNL+FCKA+ ++  T   ILQ YE ASGQ +N DKS++FFS N   + R  +  MLG
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG

XP_023912601.1 uncharacterized protein LOC112024185 [Quercus suber]2.7e-4452.44Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKA+DRVEW F++ +M ++GF  KW+ LIM+CV S  +S+L+NG   G I P RG+RQGDPLSP +FLLC+K LS++I E      I GI   + CP +
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG
        +HLFFADD+L+FCKA  ++     SIL +YE AS Q +N DKS++FFSPN S + R ++ N+LG
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG

XP_023920446.1 uncharacterized protein LOC112031976 [Quercus suber]1.2e-4454.27Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKAYDR+EW FL+R+M +MGFH KW+  IM+CVKS  +SIL+NG P G II  RG+RQGDPLSPY+FLLCS+ L+ +I   V   HI G+   ++ PK+
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG
        SH+FFADD+L+FC+A +  V      L KYE ASGQ +N DK+ LFFS N  +  +  L  +LG
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG

TrEMBL top hitse value%identityAlignment
A0A2N9EWI8 Uncharacterized protein1.7e-4454.55Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKAY+RVEW +L+++ML++GFH KWVALIM+CV S  +SIL+NG P G + P RGLRQGDPLSPY+FL+C++ LS+++ +      I GI  S+  P+V
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLGS
        SHLFFADD+LIFC+A+         IL  YE ASGQ +N DK+ALFFS N S   ++T+  M G+
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLGS

A0A2N9F4S2 Reverse transcriptase domain-containing protein1.8e-4653.99Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKAYDRVEW FLE++M+ MGFH KWVAL+M+CV+S  FS+L+NG P G   P RGLRQGDPLSPY+FLLC++ L +++T      H+ GI  S+  PK+
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNML
        +HLFFADD+++FC+A++ +  T   IL+KYE ASGQ +N DK+ LFFS + + + +  + N L
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNML

A0A2N9FT59 Reverse transcriptase domain-containing protein1.5e-4553.33Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKAYDRVEW +L+ +M+++GFH++WV L+M+CV+SA +SIL+NG P G I PQRGLRQGDPLSPY+FLLC++ LS+++ +      + GI   +  P+V
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLGS
        SHLFFADD+++FC+A+        ++L  Y  ASGQVVN+DK+ALFFSPN+S   R+T+ +  G+
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLGS

A0A5B7AER2 Reverse transcriptase domain-containing protein2.6e-4555.09Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKAYDRVEW FLE +ML+MGFH +WV+L+M CV +  FS+L+NG P G I P RGLRQGDPLSPY+F+LC++A S++  +    N I GI  +++ PK+
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLGSGL
        SHLFFADD+L+F KA  +QV     I++ Y  ASGQ +N DKS+L FSPNV  D R  +  +LG  L
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLGSGL

A0A7N2L6Z9 Reverse transcriptase domain-containing protein1.1e-4652.44Show/hide
Query:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV
        MSKA+DRVEW F+ER+M +MGF+  W++LIM C+ S  +S+++NG   G I+P RGLRQGDPLSPY+FLLC++ LS+++ +      + GI   + CP++
Subjt:  MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKV

Query:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG
        +HLFFADD+L+FCKA+ E+      IL+KYE ASGQ VN+DKS++FFSPN + + + T+ N+LG
Subjt:  SHLFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLG

SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein5.4e-0826.39Show/hide
Query:  KAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSH
        KA+D+++  F+ +++ R G    ++ +I         +I +NG  +  I  + G RQG PLSPY+F +  + L+  I +      I GI+  K   K+S 
Subjt:  KAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSH

Query:  LFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALF
        L  ADD +++            +++  +    G  +N++KS  F
Subjt:  LFFADDNLIFCKASIEQVWTFCSILQKYELASGQVVNADKSALF

P92555 Uncharacterized mitochondrial protein AtMg012506.0e-1538.32Show/hide
Query:  LLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSHLFFADDNLIFCKASI-EQVWTFCSILQKYELASGQVVNA
        ++NG P G + P RGLRQGDPLSPY+F+LC++ LS +         + GI+ S + P+++HL FADD        +  Q+W    +  +  L  G  VN 
Subjt:  LLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSHLFFADDNLIFCKASI-EQVWTFCSILQKYELASGQVVNA

Query:  DKSALFF
          S L+F
Subjt:  DKSALFF

Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)5.6e-0528.1Show/hide
Query:  KAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSH
        KA+D V    + R M   G        IM  +  A  +I++ G     I  + G++QGDPLSP +F +    L  ++T +   +   G   +  C K++ 
Subjt:  KAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSH

Query:  LFFADDNLIFCKASIE---QVWTFCSILQKYELASGQVVNADKSALFFSPNVS
        L FADD L+     I+    + T C+    Y    G  +N +K A   +  VS
Subjt:  LFFADDNLIFCKASIE---QVWTFCSILQKYELASGQVVNADKSALFFSPNVS

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.3e-1638.32Show/hide
Query:  LLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSHLFFADDNLIFCKASI-EQVWTFCSILQKYELASGQVVNA
        ++NG P G + P RGLRQGDPLSPY+F+LC++ LS +         + GI+ S + P+++HL FADD        +  Q+W    +  +  L  G  VN 
Subjt:  LLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSHLFFADDNLIFCKASI-EQVWTFCSILQKYELASGQVVNA

Query:  DKSALFF
          S L+F
Subjt:  DKSALFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAAGCGTACGATCGAGTGGAGTGGTGTTTTTTGGAGCGCCTGATGTTGAGGATGGGGTTCCACCTGAAATGGGTGGCTTTGATCATGGATTGTGTGAAATCCGC
AAAATTTTCTATCCTTCTTAATGGTACTCCTATAGGAACCATTATACCACAACGGGGGTTGAGACAAGGTGACCCACTCTCTCCCTATATGTTTTTGCTTTGCTCGAAGG
CATTGTCTTCGATGATAACTGAGGTTGTGGCTTGGAACCATATTACGGGCATCAAGGCAAGCAAACATTGTCCGAAGGTGTCGCATCTTTTTTTTGCTGATGACAATCTC
ATTTTCTGTAAGGCATCCATTGAACAGGTTTGGACATTTTGTTCTATTCTACAAAAGTATGAGTTGGCTTCAGGACAAGTTGTTAATGCTGACAAGTCTGCGTTATTTTT
CTCACCTAATGTATCTATGGACTTTCGGTCAACTCTTTCTAATATGTTGGGTTCTGGGCTGAAACAAGATCTGACTCTAAGGGAAATGTACATGGTGCGAGATTTGGCGA
GCGAGTGCAGAGTGCACAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAAAGCGTACGATCGAGTGGAGTGGTGTTTTTTGGAGCGCCTGATGTTGAGGATGGGGTTCCACCTGAAATGGGTGGCTTTGATCATGGATTGTGTGAAATCCGC
AAAATTTTCTATCCTTCTTAATGGTACTCCTATAGGAACCATTATACCACAACGGGGGTTGAGACAAGGTGACCCACTCTCTCCCTATATGTTTTTGCTTTGCTCGAAGG
CATTGTCTTCGATGATAACTGAGGTTGTGGCTTGGAACCATATTACGGGCATCAAGGCAAGCAAACATTGTCCGAAGGTGTCGCATCTTTTTTTTGCTGATGACAATCTC
ATTTTCTGTAAGGCATCCATTGAACAGGTTTGGACATTTTGTTCTATTCTACAAAAGTATGAGTTGGCTTCAGGACAAGTTGTTAATGCTGACAAGTCTGCGTTATTTTT
CTCACCTAATGTATCTATGGACTTTCGGTCAACTCTTTCTAATATGTTGGGTTCTGGGCTGAAACAAGATCTGACTCTAAGGGAAATGTACATGGTGCGAGATTTGGCGA
GCGAGTGCAGAGTGCACAGATGA
Protein sequenceShow/hide protein sequence
MSKAYDRVEWCFLERLMLRMGFHLKWVALIMDCVKSAKFSILLNGTPIGTIIPQRGLRQGDPLSPYMFLLCSKALSSMITEVVAWNHITGIKASKHCPKVSHLFFADDNL
IFCKASIEQVWTFCSILQKYELASGQVVNADKSALFFSPNVSMDFRSTLSNMLGSGLKQDLTLREMYMVRDLASECRVHR