CuGenDBv2

Gene ID	Lcy07g008080
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome location	Chr07:36265364..36269106
RNA-Seq Expression	Lcy07g008080
Synteny	Lcy07g008080
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	IPR004332 - Transposase, MuDR, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]

2.2e-51

44.76

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Query:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE
        +++F + V D FSSK   +  + AI +RDNFQY  +KSN +V+ ++C ++NC W +RA C   GD S  WV+ +   +H+ S+DV LTDH+QATF+ IK+
Subjt:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE

Query:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH
         IK KIS+ GS+LSTPK++  ++  + G++ISYQKAWRA +  L++IRGS EDSY ++P                                 +S    QH
Subjt:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH

Query:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        C  +I +DGTS+KNKY GTLL ++T DAN +IFP +F VVDS+NDSSW
Subjt:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

KAA0051302.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]

7.9e-49

47.26

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Query:  FSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKTKISIVGS
        FS+K   +  + AIA+RDNFQY T+KSN +V+ ++C +KN  W +RA C    D S  WVV +   +H+CS+DV LTDH+QATF+ IK+ IK KIS+ GS
Subjt:  FSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKTKISIVGS

Query:  ELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPIISVDGTS
        ELST KD+  ++ ++ G++ SYQKAWRA EATL++IRGS EDSY ++                                  +S    +H R +IS+DGTS
Subjt:  ELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPIISVDGTS

Query:  MKNKYA-GTLLIAATPDANNKIFPFSFSVVDSENDSS
        +KN+Y  GTLL A+TPDAN++IFP +F VVDSEN+SS
Subjt:  MKNKYA-GTLLIAATPDANNKIFPFSFSVVDSENDSS

XP_008452162.1 PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]

3.2e-50

45.3

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Query:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE
        +++F + V D FS+K   +  +  IA+RDNFQY T+KSN++V+ ++C+++NC W + A C   GD S  WV+ +   + +CS+D  LTDH+QATF+ IK+
Subjt:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE

Query:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIR-------------------GSSEDSYSLIPSSRQKIQHCRPIISVDGTSMKN
         IK KI + GS+LSTPKD+  ++  + G++I YQKAWRAR A L++IR                   G     +  + +S    QHCR +IS++ TS+KN
Subjt:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIR-------------------GSSEDSYSLIPSSRQKIQHCRPIISVDGTSMKN

Query:  KYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        KY GTLL A+TPD+N+ IFP +F VVDSENDSSW
Subjt:  KYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

XP_008463110.1 PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo]

2.2e-51

44.76

Show/hide

Query:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE
        +++F + V D FSSK   +  + AI +RDNFQY  +KSN +V+ ++C ++NC W +RA C   GD S  WV+ +   +H+ S+DV LTDH+QATF+ IK+
Subjt:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE

Query:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH
         IK KIS+ GS+LSTPK++  ++  + G++ISYQKAWRA +  L++IRGS EDSY ++P                                 +S    QH
Subjt:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH

Query:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        C  +I +DGTS+KNKY GTLL ++T DAN +IFP +F VVDS+NDSSW
Subjt:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]

1.9e-58

48.36

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Query:  FKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRACRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKT
        F I VND F  K N++N L ++AIR NF +RT+KSN +VL V C+  NC WF+ A +FG  GS+ W+VKK   +H+CS++++L DH+QATFS IKE IK 
Subjt:  FKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRACRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKT

Query:  KISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPI
        +I+  G++L + KD  S+VH +  ++I+YQKA  ARE  + EIRGS E SY+LIP                                 SS    ++C P+
Subjt:  KISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPI

Query:  ISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        ISVDGTSMKNKYAGTL+ A T DAN++IFP +FSV DSEND+SW
Subjt:  ISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BT85 uncharacterized protein LOC103493267

1.6e-50

45.3

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Query:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE
        +++F + V D FS+K   +  +  IA+RDNFQY T+KSN++V+ ++C+++NC W + A C   GD S  WV+ +   + +CS+D  LTDH+QATF+ IK+
Subjt:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE

Query:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIR-------------------GSSEDSYSLIPSSRQKIQHCRPIISVDGTSMKN
         IK KI + GS+LSTPKD+  ++  + G++I YQKAWRAR A L++IR                   G     +  + +S    QHCR +IS++ TS+KN
Subjt:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIR-------------------GSSEDSYSLIPSSRQKIQHCRPIISVDGTSMKN

Query:  KYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        KY GTLL A+TPD+N+ IFP +F VVDSENDSSW
Subjt:  KYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

A0A1S3CIV7 uncharacterized protein LOC103501336

1.1e-51

44.76

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Query:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE
        +++F + V D FSSK   +  + AI +RDNFQY  +KSN +V+ ++C ++NC W +RA C   GD S  WV+ +   +H+ S+DV LTDH+QATF+ IK+
Subjt:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE

Query:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH
         IK KIS+ GS+LSTPK++  ++  + G++ISYQKAWRA +  L++IRGS EDSY ++P                                 +S    QH
Subjt:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH

Query:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        C  +I +DGTS+KNKY GTLL ++T DAN +IFP +F VVDS+NDSSW
Subjt:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like

1.1e-51

44.76

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Query:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE
        +++F + V D FSSK   +  + AI +RDNFQY  +KSN +V+ ++C ++NC W +RA C   GD S  WV+ +   +H+ S+DV LTDH+QATF+ IK+
Subjt:  ETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKE

Query:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH
         IK KIS+ GS+LSTPK++  ++  + G++ISYQKAWRA +  L++IRGS EDSY ++P                                 +S    QH
Subjt:  CIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQH

Query:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        C  +I +DGTS+KNKY GTLL ++T DAN +IFP +F VVDS+NDSSW
Subjt:  CRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

A0A5A7U620 Protein FAR-RED ELONGATED HYPOCOTYL 3-like

3.8e-49

47.26

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Query:  FSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKTKISIVGS
        FS+K   +  + AIA+RDNFQY T+KSN +V+ ++C +KN  W +RA C    D S  WVV +   +H+CS+DV LTDH+QATF+ IK+ IK KIS+ GS
Subjt:  FSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRA-CRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKTKISIVGS

Query:  ELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPIISVDGTS
        ELST KD+  ++ ++ G++ SYQKAWRA EATL++IRGS EDSY ++                                  +S    +H R +IS+DGTS
Subjt:  ELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPIISVDGTS

Query:  MKNKYA-GTLLIAATPDANNKIFPFSFSVVDSENDSS
        +KN+Y  GTLL A+TPDAN++IFP +F VVDSEN+SS
Subjt:  MKNKYA-GTLLIAATPDANNKIFPFSFSVVDSENDSS

A0A6J1C328 uncharacterized protein LOC111006994

9.1e-59

48.36

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Query:  FKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRACRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKT
        F I VND F  K N++N L ++AIR NF +RT+KSN +VL V C+  NC WF+ A +FG  GS+ W+VKK   +H+CS++++L DH+QATFS IKE IK 
Subjt:  FKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRACRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKT

Query:  KISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPI
        +I+  G++L + KD  S+VH +  ++I+YQKA  ARE  + EIRGS E SY+LIP                                 SS    ++C P+
Subjt:  KISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIP---------------------------------SSRQKIQHCRPI

Query:  ISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        ISVDGTSMKNKYAGTL+ A T DAN++IFP +FSV DSEND+SW
Subjt:  ISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

2.8e-07

31.96

Show/hide

Query:  VQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIPSSRQKIQHCRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        + S +HS  G+ +     W+    T +    S    +     S Q  QHCRP+I VD  ++  KY   L+IA+  DA N+ FP +F+V    +  SW
Subjt:  VQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIPSSRQKIQHCRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

AT1G64255.1 MuDR family transposase

1.5e-05

40.35

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Query:  PSSRQKIQHCRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW
        P S +  QHCRP+I VD  ++  +Y   L+IA+  DA NK FP +F+V    +   W
Subjt:  PSSRQKIQHCRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSW

AT1G64260.1 MuDR family transposase

3.3e-08

21.84

Show/hide

Query:  KCIVKNCGWFVRACRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNE
        +C+   C W +RA R    G     + K  G H+CS +       +     I+  ++ + ++  +EL      + +   + G  +   K    +   +  
Subjt:  KCIVKNCGWFVRACRFGGDGSDTWVVKKIYGDHSCSMDVILTDHKQATFSFIKECIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNE

Query:  IRGSSEDSYSLIP-------------------------------------SSRQKIQHCRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDS
        + G  + S+ ++P                                      S +  QHCRP+I VD  S+  KY   L+IA+  DA NK FP +F+V   
Subjt:  IRGSSEDSYSLIP-------------------------------------SSRQKIQHCRPIISVDGTSMKNKYAGTLLIAATPDANNKIFPFSFSVVDS

Query:  ENDSSW
         +  SW
Subjt:  ENDSSW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCATTTGAAAATAATCCCCCAAACACGCTTCTTCCTTGTCGAGCTTGCTGCTATCGTCTTCTTCCTTCCGAAAAAGGTGGGTTTCATGGCGAAGAAACAGAT
TTTAAGATTGATGTGAACGACACGTTTTCTAGTAAGGTGAATGTACGAAATGTGTTAGGTGCAATTGCTATTAGGGACAATTTTCAGTATAGGACAATCAAATCA
AATCATGATGTTTTGTACGTCAAATGTATAGTTAAAAATTGTGGTTGGTTTGTTCGTGCGTGCCGATTTGGAGGTGATGGAAGTGACACTTGGGTAGTCAAGAAA
ATTTATGGTGATCATTCATGTTCCATGGATGTTATATTGACTGATCACAAGCAAGCAACATTCTCTTTTATAAAAGAGTGCATTAAGACAAAGATTAGCATAGTT
GGTAGTGAATTAAGCACTCCAAAAGATGTGCAATCTTACGTTCATTCCCAATTTGGAATGAACATTAGTTATCAGAAAGCATGGCGTGCCAGGGAAGCGACCCTA
AATGAGATAAGAGGATCATCAGAAGATTCATATTCTCTAATTCCATCGTCAAGGCAAAAAATCCAGCATTGTAGACCAATAATTTCGGTTGATGGAACCTCCATG
AAGAATAAGTATGCTGGAACTCTATTGATTGCTGCAACACCTGATGCTAATAATAAGATATTCCCTTTCTCATTTTCTGTTGTTGATTCTGAGAATGATTCTTCT
TGGGAGTGA

mRNA sequence

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Protein sequence

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MAFENNPPNTLLPCRACCYRLLPSEKGGFHGEETDFKIDVNDTFSSKVNVRNVLGAIAIRDNFQYRTIKSNHDVLYVKCIVKNCGWFVRACRFGGDGSDTWVVKK
IYGDHSCSMDVILTDHKQATFSFIKECIKTKISIVGSELSTPKDVQSYVHSQFGMNISYQKAWRAREATLNEIRGSSEDSYSLIPSSRQKIQHCRPIISVDGTSM
KNKYAGTLLIAATPDANNKIFPFSFSVVDSENDSSWE

Lcy07g008080 (gene) of Sponge gourd (P93075) v1 genome