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Lcy07g009630 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g009630
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr07:38442012..38442734
RNA-Seq ExpressionLcy07g009630
SyntenyLcy07g009630
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023876296.1 uncharacterized protein LOC111988743 [Quercus suber]8.3e-2737.79Show/hide
Query:  MAVDKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGW--RWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIR
        +  D+FE F+V  W +WN+RN V+      D R    W  +   EYLS F+    + +  + R      W+ P  P  K+N D AI K LN S IGAIIR
Subjt:  MAVDKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGW--RWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIR

Query:  NEKGEVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVA
        N KGEVM  +      V D +  E +A R+ +  A++A FS + +E D+A V+  +     D S LG +V D++ LA GL + SFS  +R  N +AH +A
Subjt:  NEKGEVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVA

Query:  KSALRMCLEGIWLEEVP
        + A  +  + IWLEE P
Subjt:  KSALRMCLEGIWLEEVP

XP_023904177.1 uncharacterized protein LOC112015942 [Quercus suber]3.5e-2537.26Show/hide
Query:  FMVMCWWVWNRRNKVLFGESEVDSREEGGW--RWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVML
        F+V  W +W++RN VL G       +E GW  +   E+L  F     +      R      W PP  P  K+N D AI      S  GA+IRNE GEVM 
Subjt:  FMVMCWWVWNRRNKVLFGESEVDSREEGGW--RWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVML

Query:  TLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRMCL
         L  +   VS  D  E +A R+ +  AV+A F+ + +E DS  V++ + S   D S +G +VADIK L  GL   SFSW  R  N++AH +AK A  +  
Subjt:  TLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRMCL

Query:  EGIWLEEVPSVA
        +  W+E+ P VA
Subjt:  EGIWLEEVPSVA

XP_023915286.1 uncharacterized protein LOC112026812 [Quercus suber]9.8e-2837Show/hide
Query:  MAVDKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNE
        M +D FE F+V+CW +W+RRN+V+FG      +E G     A  L    V  R      +     + W PPV    K+N D+A+   ++ S +G IIRN 
Subjt:  MAVDKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNE

Query:  KGEVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKS
         G+VM  L      V+D D  E +A R GL  A+EA F  + VE D+  V++ + S   D+S LG LV D++ LAG L    F   RRS N +AH +A+ 
Subjt:  KGEVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKS

Query:  ALRMCLEGIWLEEV-PSVAERVYVAEL
        A  +  + +WLE+  P  AE ++V  L
Subjt:  ALRMCLEGIWLEEV-PSVAERVYVAEL

XP_030945916.1 uncharacterized protein LOC115970418 [Quercus lobata]1.7e-2432.89Show/hide
Query:  DKFEEFMVMCWWVWNRRNKVLFGESEVDSRE--EGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEK
        DK E F V+ W++WN RN++   E  + S    +    ++ E+ +       + S+G  R      W PP+    K N D A+      + IG ++RN K
Subjt:  DKFEEFMVMCWWVWNRRNKVLFGESEVDSRE--EGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEK

Query:  GEVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSA
        GEV+  L + + +   V++LEA+A R  +   VE  F+  E E DS  V R +RS     S +G +V DI  + G L F SFS  RR  N +AH +A+ A
Subjt:  GEVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSA

Query:  LRMCLEGIWLEEVPSVAERVYVAEL
        +      +W+E VPS  E   +A++
Subjt:  LRMCLEGIWLEEVPSVAERVYVAEL

XP_030946032.1 uncharacterized protein LOC115970553 [Quercus lobata]3.0e-2433.04Show/hide
Query:  VDKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKG
        +DK E F V+ W++WN RNK+L  E  + S  +   +    YLS F+V   + +    + G +  W PP+    K N D A+      + IG ++RN KG
Subjt:  VDKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKG

Query:  EVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSAL
        EV+  L + + +   V+VLEA+A R  +   VE   +  + E D   V R +RS  +  S +G +V DI  + G L F SFS  RR  N +AH +A+ A+
Subjt:  EVMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSAL

Query:  RMCLEGIWLEEVPSVAERVYVAEL
              +W+E VPS  +   ++++
Subjt:  RMCLEGIWLEEVPSVAERVYVAEL

TrEMBL top hitse value%identityAlignment
A0A2N9F6L9 Reverse transcriptase domain-containing protein5.1e-2231.08Show/hide
Query:  EEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVML
        E+F+++CW +W RRNK+     +VDS  + G +    YL  +     ++    +   E+ SW+PP     K+N D A+    N + IG I+R+  G V+ 
Subjt:  EEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVML

Query:  TLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRMCL
        +L++ V F   V  +EA A +  +  A+E   +  E E DS  VV  +       +  G+L+AD K +A  L  CSF+  +R  N++AH +A  A     
Subjt:  TLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRMCL

Query:  EGIWLEEVPSVAERVYVAELRA
          +W+E VP   E +Y++ L +
Subjt:  EGIWLEEVPSVAERVYVAELRA

A0A2N9HRK6 Uncharacterized protein2.4e-2431.51Show/hide
Query:  EEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVML
        E F+++ W +W RRNK+    + V   +      +  YL  F    +          +   W PP   N K N D AI K  N + IG I+RN +G+VM 
Subjt:  EEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVML

Query:  TLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRMCL
        +L++ V +   V+ +EA A R  ++   E   S  E E DS  VV  + S + + +  G L+ D+K L  GL    F+  +R  N MAH +A+ A+    
Subjt:  TLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRMCL

Query:  EGIWLEEVPSVAERVYVAE
          +W+E+VP   +R+Y++E
Subjt:  EGIWLEEVPSVAERVYVAE

A0A6J1DBJ7 uncharacterized protein LOC1110189731.3e-2234.51Show/hide
Query:  MVMCWWVWNRRNKV----LFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEG--VKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGE
        +V+ W +WN RN+       G S  D        W   YL  ++   R       V R   +  W PP  P  KVN D A  K   ++ +G IIR+  G 
Subjt:  MVMCWWVWNRRNKV----LFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEG--VKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGE

Query:  VMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIK-GLAGGLGFCSFSWCRRSRNQMAHVVAKSAL
        V LT ++L+   SDVD +E  A+ EG+ +AVEA F R ++ETDS R+   + ++ +D SE+G+L + IK  L+      SFS+  R+ N  AH++A+ AL
Subjt:  VMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIK-GLAGGLGFCSFSWCRRSRNQMAHVVAKSAL

Query:  RMCLEGIWLEEVPSVAERVYVAELRA
              IW+EE P     V   + R+
Subjt:  RMCLEGIWLEEVPSVAERVYVAELRA

A0A7J9L182 Uncharacterized protein1.1e-2133.48Show/hide
Query:  FEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLS-HFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEV
        +E+ ++  W +W   N+    E +V +R E     +A+ LS H  +   +      RE +I+ W PP  P  K+N D      LN S  G IIRNEKGEV
Subjt:  FEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLS-HFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEV

Query:  MLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRM
        M + + L   + DV + EA+A  +GL  A E  F  VEVE D+  V+  I       ++L  ++ADIK         SF   RR  NQ++H++A+     
Subjt:  MLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRM

Query:  CLEGIWLEEVPSVAERVYVAE
             W+E++P+VA+ +  AE
Subjt:  CLEGIWLEEVPSVAERVYVAE

A0A7N2RFA1 Uncharacterized protein1.5e-2132.74Show/hide
Query:  DKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGE
        ++ E F+V  W +W++RN++  G  ++ S  +   R   + L+ FR   + +     R   +  W PP     K+N D AI   L  S IGAIIRNE+GE
Subjt:  DKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGE

Query:  VMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALR
        VM  +    + V D    E +A R  L  A++  FS + +E DSA+V+  +RS   + S LG +  DI+ L  GL +       R+ N   H +A+ A  
Subjt:  VMLTLMKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALR

Query:  MCLEGIWLEEVPSVA-ERVYVAELRA
        +  + +WLE+ P  A E +YV  L++
Subjt:  MCLEGIWLEEVPSVA-ERVYVAELRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein4.9e-0925.77Show/hide
Query:  MCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIES---WIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVMLTL
        + W +W  RN+++F   E +++E    R   + L  +R+     S G K +    S   W PP     K NTD   N+      IG ++RNEKGEV    
Subjt:  MCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIES---WIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVMLTL

Query:  MKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSAL
         + +  +  V   E  A+R  +       ++ V  E+DS  ++  + ++ I +  L   + D++ L        F +  R  N +A  VA+ +L
Subjt:  MKLVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGATAAATTCGAGGAATTCATGGTGATGTGCTGGTGGGTGTGGAATAGGAGGAATAAGGTTTTGTTCGGAGAGAGTGAAGTGGATAGTAGGGAAGAGGGTGG
ATGGAGATGGGTGGCTGAGTATTTGTCTCATTTTAGGGTCTTTTGTCGAAGGAGAAGTGAAGGGGTAAAGAGGGAGGGTGAGATTGAGTCTTGGATCCCCCCTGTGTTCC
CAAATTGCAAGGTAAATACTGATATAGCAATCAATAAAAGCCTCAATCTCAGCAGTATTGGCGCAATCATCAGAAATGAAAAGGGGGAAGTGATGCTTACCTTGATGAAA
CTAGTTGAATTTGTGTCTGATGTGGATGTTCTGGAGGCGATGGCCATTCGTGAAGGGCTGGCAGTAGCTGTTGAAGCCAGTTTCTCGCGGGTGGAGGTGGAGACGGATTC
GGCCAGAGTTGTCAGAGGGATTAGATCTGAGTTCATCGATTTCTCTGAGCTGGGGATGTTGGTAGCGGATATCAAAGGCCTCGCCGGTGGGCTGGGATTTTGCTCTTTCA
GTTGGTGTCGCCGATCGAGAAATCAGATGGCGCACGTGGTGGCGAAATCGGCGCTGAGGATGTGTCTCGAAGGGATTTGGCTGGAGGAGGTGCCGTCGGTAGCTGAGAGA
GTTTATGTTGCAGAGCTTAGGGCTGTCGATTTGAGTCTTAGGGATTTCTGTTTTGATGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTGGATAAATTCGAGGAATTCATGGTGATGTGCTGGTGGGTGTGGAATAGGAGGAATAAGGTTTTGTTCGGAGAGAGTGAAGTGGATAGTAGGGAAGAGGGTGG
ATGGAGATGGGTGGCTGAGTATTTGTCTCATTTTAGGGTCTTTTGTCGAAGGAGAAGTGAAGGGGTAAAGAGGGAGGGTGAGATTGAGTCTTGGATCCCCCCTGTGTTCC
CAAATTGCAAGGTAAATACTGATATAGCAATCAATAAAAGCCTCAATCTCAGCAGTATTGGCGCAATCATCAGAAATGAAAAGGGGGAAGTGATGCTTACCTTGATGAAA
CTAGTTGAATTTGTGTCTGATGTGGATGTTCTGGAGGCGATGGCCATTCGTGAAGGGCTGGCAGTAGCTGTTGAAGCCAGTTTCTCGCGGGTGGAGGTGGAGACGGATTC
GGCCAGAGTTGTCAGAGGGATTAGATCTGAGTTCATCGATTTCTCTGAGCTGGGGATGTTGGTAGCGGATATCAAAGGCCTCGCCGGTGGGCTGGGATTTTGCTCTTTCA
GTTGGTGTCGCCGATCGAGAAATCAGATGGCGCACGTGGTGGCGAAATCGGCGCTGAGGATGTGTCTCGAAGGGATTTGGCTGGAGGAGGTGCCGTCGGTAGCTGAGAGA
GTTTATGTTGCAGAGCTTAGGGCTGTCGATTTGAGTCTTAGGGATTTCTGTTTTGATGTCTAG
Protein sequenceShow/hide protein sequence
MAVDKFEEFMVMCWWVWNRRNKVLFGESEVDSREEGGWRWVAEYLSHFRVFCRRRSEGVKREGEIESWIPPVFPNCKVNTDIAINKSLNLSSIGAIIRNEKGEVMLTLMK
LVEFVSDVDVLEAMAIREGLAVAVEASFSRVEVETDSARVVRGIRSEFIDFSELGMLVADIKGLAGGLGFCSFSWCRRSRNQMAHVVAKSALRMCLEGIWLEEVPSVAER
VYVAELRAVDLSLRDFCFDV