; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g013600 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g013600
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr07:42712900..42719692
RNA-Seq ExpressionLcy07g013600
SyntenyLcy07g013600
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2632146.1 unnamed protein product [Spirodela intermedia]5.3e-2963.48Show/hide
Query:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDR------------------------VKYLGPFSGPLENLADHLADPV
        A++MALSSPSLAG+AV L+PAAS++LG+GR++MRKTA+KPKPVSSGSPWYGPDR                        V+ +    GPLENLADHLADPV
Subjt:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDR------------------------VKYLGPFSGPLENLADHLADPV

Query:  NNNAWAYATNFVPGK
        NNNAWAYATNFVPGK
Subjt:  NNNAWAYATNFVPGK

CAA2632148.1 unnamed protein product [Spirodela intermedia]1.1e-2658.73Show/hide
Query:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLG----------------------PFS-------------GPL
        A++MALSSPSLAG+AV L+PAAS++LG+GR++MRKTA+KPKPVSSGSPWYGP     LG                       FS             GPL
Subjt:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLG----------------------PFS-------------GPL

Query:  ENLADHLADPVNNNAWAYATNFVPGK
        ENLADHLADPVNNNAWAYATNFVPGK
Subjt:  ENLADHLADPVNNNAWAYATNFVPGK

GAY35090.1 hypothetical protein CUMW_014210, partial [Citrus unshiu]1.9e-2661.16Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS--------------------------GPLENLADHL
        MA S+MALSS S  G+AV L+P+ ++L   GR++MRKT S  K VSSGSPWYGPDRVKYLGPFS                          GPLENLADHL
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS--------------------------GPLENLADHL

Query:  ADPVNNNAWAYATNFVPGKLI
        ADPVNNNAWAYATNFVPGKLI
Subjt:  ADPVNNNAWAYATNFVPGKLI

KAF8408954.1 hypothetical protein HHK36_005024 [Tetracentron sinense]1.5e-2871.84Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGP----------DRVKYLGPFSGPLENLADHLADPVNNNAWAYATNFV
        MAASSMALSSPSLAG+AV L+P+AS+LLG+GRVTMRKTA+KPKPVSSGSP + P            +K +    GPLENLADHLADPVNNNAWAYATNFV
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGP----------DRVKYLGPFSGPLENLADHLADPVNNNAWAYATNFV

Query:  PGK
        PGK
Subjt:  PGK

OVA00423.1 Chlorophyll A-B binding protein [Macleaya cordata]5.3e-2950.3Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS------------------------------------
        MAAS+MALSSPSLAG+AV LSP+ S  LG+GRVTMRKT +KPKPVSSGSPWYGPDRVKYLGPFS                                    
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS------------------------------------

Query:  ------------------------------------GPLENLADHLADPVNNNAWAYATNFVPGK
                                            GPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  ------------------------------------GPLENLADHLADPVNNNAWAYATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A068UD99 Chlorophyll a-b binding protein, chloroplastic4.5e-2650Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS------------------------------------
        MAAS+MALSSPS AG+AV ++P+ S+ LG+GRVTMRKT +KPKP SSG PWYGPDRV YLGP S                                    
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS------------------------------------

Query:  -----------------------GPLENLADHLADPVNNNAWAYATNFVPGK
                               GPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  -----------------------GPLENLADHLADPVNNNAWAYATNFVPGK

A0A200PQF5 Chlorophyll a-b binding protein, chloroplastic2.5e-2950.3Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS------------------------------------
        MAAS+MALSSPSLAG+AV LSP+ S  LG+GRVTMRKT +KPKPVSSGSPWYGPDRVKYLGPFS                                    
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS------------------------------------

Query:  ------------------------------------GPLENLADHLADPVNNNAWAYATNFVPGK
                                            GPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  ------------------------------------GPLENLADHLADPVNNNAWAYATNFVPGK

A0A2H5N4E1 Chlorophyll a-b binding protein, chloroplastic (Fragment)9.1e-2761.16Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS--------------------------GPLENLADHL
        MA S+MALSS S  G+AV L+P+ ++L   GR++MRKT S  K VSSGSPWYGPDRVKYLGPFS                          GPLENLADHL
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFS--------------------------GPLENLADHL

Query:  ADPVNNNAWAYATNFVPGKLI
        ADPVNNNAWAYATNFVPGKLI
Subjt:  ADPVNNNAWAYATNFVPGKLI

A0A7I8JMJ0 Chlorophyll a-b binding protein, chloroplastic5.3e-2758.73Show/hide
Query:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLG----------------------PFS-------------GPL
        A++MALSSPSLAG+AV L+PAAS++LG+GR++MRKTA+KPKPVSSGSPWYGP     LG                       FS             GPL
Subjt:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLG----------------------PFS-------------GPL

Query:  ENLADHLADPVNNNAWAYATNFVPGK
        ENLADHLADPVNNNAWAYATNFVPGK
Subjt:  ENLADHLADPVNNNAWAYATNFVPGK

A0A7I8JMJ3 Chlorophyll a-b binding protein, chloroplastic2.5e-2963.48Show/hide
Query:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDR------------------------VKYLGPFSGPLENLADHLADPV
        A++MALSSPSLAG+AV L+PAAS++LG+GR++MRKTA+KPKPVSSGSPWYGPDR                        V+ +    GPLENLADHLADPV
Subjt:  ASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDR------------------------VKYLGPFSGPLENLADHLADPV

Query:  NNNAWAYATNFVPGK
        NNNAWAYATNFVPGK
Subjt:  NNNAWAYATNFVPGK

SwissProt top hitse value%identityAlignment
P04783 Chlorophyll a-b binding protein 91R, chloroplastic6.1e-2073.85Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MAA++MALSSPS AG+AV  SP++S++ G G+ TMRKT +K KPVSSGSPWYGPDRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

P04783 Chlorophyll a-b binding protein 91R, chloroplastic2.0e-1096.55Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

P07369 Chlorophyll a-b binding protein 3C, chloroplastic7.9e-2075.38Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MA S+MALSS + AG+AV LSP++S++ G GRVTMRKTA+K KP SSGSPWYGPDRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

P07369 Chlorophyll a-b binding protein 3C, chloroplastic2.6e-1096.55Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

P12333 Chlorophyll a-b binding protein, chloroplastic5.5e-2176.92Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MA+S+MALSSPSLAG+AV L P AS+++G+GR+TMRKTA KPK V S SPWYGPDRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

P12333 Chlorophyll a-b binding protein, chloroplastic1.3e-0993.1Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GPLENLADHLADPVNNNAW +ATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

P12469 Chlorophyll a-b binding protein C, chloroplastic7.9e-2076.92Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MAAS+MALSS S AG+AV LSP++S++ G G+VTMRKTASK KPVSS SPWYGP+RVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

P12469 Chlorophyll a-b binding protein C, chloroplastic8.8e-11100Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

P27495 Chlorophyll a-b binding protein 40, chloroplastic4.2e-2180Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MAAS+MALSSPS AG+AV LSP++S++ G G+VTMRKTASK K VSSGSPWYGPDRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

P27495 Chlorophyll a-b binding protein 40, chloroplastic8.8e-11100Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GPLENLADHLADPVNNNAWAYATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 34.8e-2078.46Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MAAS+MALSSP+ AG+AV LSPAAS++LG GRVTMRKT +KPK   SGSPWYG DRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

AT1G29910.1 chlorophyll A/B binding protein 33.1e-1193.1Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 24.8e-2078.46Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MAAS+MALSSP+ AG+AV LSPAAS++LG GRVTMRKT +KPK   SGSPWYG DRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

AT1G29920.1 chlorophyll A/B-binding protein 23.1e-1193.1Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 16.2e-2078.46Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MAAS+MALSSP+ AG+AV LSPAAS++LG GRVTMRKT +KPK   SGSPWYG DRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

AT1G29930.1 chlorophyll A/B binding protein 13.1e-1193.1Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GP+ENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B27.6e-1875.38Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MA+S+MALSSP+ AG+AV   PAASD+LG GRVTMRKT +KPK   SGSPWYG DRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

AT2G34420.1 photosystem II light harvesting complex gene B1B21.8e-1196.55Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B12.2e-1775.38Show/hide
Query:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG
        MAAS+MALSSP+L G+AV LSPAAS++ G GR+TMRK ASKP    SGSPWYG DRVKYLGPFSG
Subjt:  MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSG

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B11.8e-1196.55Show/hide
Query:  GPLENLADHLADPVNNNAWAYATNFVPGK
        GPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  GPLENLADHLADPVNNNAWAYATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTCATCAATGGCTCTGTCTTCCCCATCTCTGGCCGGCCAAGCCGTGACACTGTCCCCCGCCGCCTCCGACCTCCTCGGCAAAGGCCGTGTCACCATGAGGAA
AACCGCCAGCAAGCCCAAGCCCGTCTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAGTACTTGGGCCCATTCTCCGGGCCTTTGGAGAATTTGGCCGACCATT
TGGCCGACCCTGTTAACAACAATGCTTGGGCCTATGCCACTAACTTTGTACCTGGAAAGTTAATTGGGCATCCGGACCACTACTTGGAGTGGGATAGCATAAGTTATTTT
CGAAAAAATTTCTCTTTGGCCCACTATCCCTACTTGTTAATTACTCCTTTTCTACTATATCTTTTTGGGGCTCTGGATTTGTTGGGTTTGAGTTATTTCAGACAGCATTT
TGGCATATCCCCCATGCTTTTTGGGTCTCCATTGGCTAAGCACGATTCGCTTTATTTCCCTTTCTGGGTTCCTGGAGGAAGGGGCAAATCTGGGTCTATCTTCGATTACT
ACATGAGGTAA
mRNA sequenceShow/hide mRNA sequence
CTCAGATTATAATTCAACCATTCCAACCATTATCAAAAATCTACAAAGTTAGAAGATATTTTGAATTCAAAAGACCAAATAAACGGAAACTTGCGGAGTTATCACATTCA
CCACCAATGAACAAACCCAAAACAACAAAAATTTCTCCTTTTCTTATCCTTATCATCAGAGGTCCCATGATATCAAAGATAAAGAGTACGTGGACTTCAACCATTGGCTA
AGACAGTGAAGTAGCAAAATATCGAGGAGGAAGTAGCTCCACATGAAAGCCATGGAAAAGCTCCGAAGCCATTTGTGGATGAGAGGCTGCCAACTGCAAGAACTATGCCC
CATTCTCCATAGCTAAAAAATCTTCCAATCTCATTTTCGCCAATGAGAAAACAGATAAAGATCTCATCAAGATAAGGACCTATTCTCTTCTTCTTCTATAAAATAAATCA
AACCCTCAATTAATTCCTTCAAACTCACTCAACTCAATTCTCAAATCTCCACCAAAAAGAAAAAAAAAATGGCAGCTTCATCAATGGCTCTGTCTTCCCCATCTCTGGCC
GGCCAAGCCGTGACACTGTCCCCCGCCGCCTCCGACCTCCTCGGCAAAGGCCGTGTCACCATGAGGAAAACCGCCAGCAAGCCCAAGCCCGTCTCCTCCGGAAGCCCATG
GTACGGCCCAGATCGCGTCAAGTACTTGGGCCCATTCTCCGGGCCTTTGGAGAATTTGGCCGACCATTTGGCCGACCCTGTTAACAACAATGCTTGGGCCTATGCCACTA
ACTTTGTACCTGGAAAGTTAATTGGGCATCCGGACCACTACTTGGAGTGGGATAGCATAAGTTATTTTCGAAAAAATTTCTCTTTGGCCCACTATCCCTACTTGTTAATT
ACTCCTTTTCTACTATATCTTTTTGGGGCTCTGGATTTGTTGGGTTTGAGTTATTTCAGACAGCATTTTGGCATATCCCCCATGCTTTTTGGGTCTCCATTGGCTAAGCA
CGATTCGCTTTATTTCCCTTTCTGGGTTCCTGGAGGAAGGGGCAAATCTGGGTCTATCTTCGATTACTACATGAGGTAA
Protein sequenceShow/hide protein sequence
MAASSMALSSPSLAGQAVTLSPAASDLLGKGRVTMRKTASKPKPVSSGSPWYGPDRVKYLGPFSGPLENLADHLADPVNNNAWAYATNFVPGKLIGHPDHYLEWDSISYF
RKNFSLAHYPYLLITPFLLYLFGALDLLGLSYFRQHFGISPMLFGSPLAKHDSLYFPFWVPGGRGKSGSIFDYYMR