; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g015230 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g015230
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptiontranscription initiation factor IIA subunit 1
Genome locationChr07:44184238..44191043
RNA-Seq ExpressionLcy07g015230
SyntenyLcy07g015230
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0005672 - transcription factor TFIIA complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR004855 - Transcription factor IIA, alpha/beta subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061868.1 transcription initiation factor IIA subunit 1 [Cucumis melo var. makuwa]4.0e-19193.73Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTD SPAATTPGGS  NNV VRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR+EADRGA  AHPS TQDFF+
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL

Query:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED
        MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIEISGCN+SDGRPG+ITSA SATSS+I RSLLKIPQ DGP+PDPYDDVLSTPNIYNYQGVFNED
Subjt:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED

Query:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        YNIANTPAPNDPPAGTPAVVTQDDV EEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

XP_004143132.2 LOW QUALITY PROTEIN: transcription initiation factor IIA large subunit [Cucumis sativus]3.4e-19093.75Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDE-ADRGA--AHPSHTQDFF
        TPI  PLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR+E ADRGA  AHPS TQDFF
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDE-ADRGA--AHPSHTQDFF

Query:  LMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNE
        +MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIEISGCN+SDGRPG ITSA SATSSHI RSLLKIPQ DGP+PDPYDDVLSTPNIYNYQGVFNE
Subjt:  LMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNE

Query:  DYNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        DYNIANTPAPNDPPAGTPAVVTQDDV EEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  DYNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

XP_008464085.1 PREDICTED: transcription initiation factor IIA subunit 1 [Cucumis melo]6.2e-19294.01Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTD SPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR+EADRGA  AHPS TQDFF+
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL

Query:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED
        MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIEISGCN+SDGRPG+ITSA SATSS+I RSLLKIPQ DGP+PDPYDDVLSTPNIYNYQGVFNED
Subjt:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED

Query:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        YNIANTPAPNDPPAGTPAVVTQDDV EEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

XP_022148420.1 transcription initiation factor IIA subunit 1-like [Momordica charantia]2.4e-19193.68Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNS
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNP+MQPPSWMGQRTPVDVNIAYVEGRDEADRGA+H S TQDFF+MNS
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNS

Query:  GKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYNI
        GKRKR+DFASQYQ +GFIPQQDGAGDAANS+FEIEISG NA+DGRP   TS NS  SSHIARSLLKIPQ DGPIPDPYDDVLSTPNIY+YQGV+NEDYN+
Subjt:  GKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYNI

Query:  ANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        ANTPAPNDPPA TPAVVTQDDVGEEEED EPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  ANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

XP_038901376.1 transcription initiation factor IIA subunit 1-like [Benincasa hispida]1.2e-19093.19Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLR+EF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL
        TPIQTPLPGTADNAMYN+PTGPSDHSASGTDASPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGRDE DRGA  AHPS TQDFF+
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL

Query:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED
        MNSGKRKRDDFASQYQ +GFIPQQDGAGDA NS+FEIEISGCNASDGRPG ITSA S TSSHI RSLLKIPQ DGP+PDPYDDVLSTPNIYNYQGVFNED
Subjt:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED

Query:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        YNIANTPAPNDPP  TPAVVTQDDVGEEEED EPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

TrEMBL top hitse value%identityAlignment
A0A0A0KE66 Uncharacterized protein8.7e-19294.29Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDE-ADRGA--AHPSHTQDFF
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR+E ADRGA  AHPS TQDFF
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDE-ADRGA--AHPSHTQDFF

Query:  LMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNE
        +MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIEISGCN+SDGRPG ITSA SATSSHI RSLLKIPQ DGP+PDPYDDVLSTPNIYNYQGVFNE
Subjt:  LMNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNE

Query:  DYNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        DYNIANTPAPNDPPAGTPAVVTQDDV EEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  DYNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

A0A1S3CM61 transcription initiation factor IIA subunit 13.0e-19294.01Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTD SPAATTPGGS  NNVEVRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR+EADRGA  AHPS TQDFF+
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL

Query:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED
        MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIEISGCN+SDGRPG+ITSA SATSS+I RSLLKIPQ DGP+PDPYDDVLSTPNIYNYQGVFNED
Subjt:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED

Query:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        YNIANTPAPNDPPAGTPAVVTQDDV EEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

A0A5D3CVW1 Transcription initiation factor IIA subunit 11.9e-19193.73Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEF+DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTD SPAATTPGGS  NNV VRSGRP PYMQPPSWMGQRTPVDVNIAYVEGR+EADRGA  AHPS TQDFF+
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSA-NNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGA--AHPSHTQDFFL

Query:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED
        MNSGKRKRDDFASQYQ +GFIPQQDGAGDAANS+FEIEISGCN+SDGRPG+ITSA SATSS+I RSLLKIPQ DGP+PDPYDDVLSTPNIYNYQGVFNED
Subjt:  MNSGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNED

Query:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        YNIANTPAPNDPPAGTPAVVTQDDV EEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  YNIANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

A0A6J1D2V5 transcription initiation factor IIA subunit 1-like1.1e-19193.68Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNS
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNP+MQPPSWMGQRTPVDVNIAYVEGRDEADRGA+H S TQDFF+MNS
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNS

Query:  GKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYNI
        GKRKR+DFASQYQ +GFIPQQDGAGDAANS+FEIEISG NA+DGRP   TS NS  SSHIARSLLKIPQ DGPIPDPYDDVLSTPNIY+YQGV+NEDYN+
Subjt:  GKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYNI

Query:  ANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        ANTPAPNDPPA TPAVVTQDDVGEEEED EPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
Subjt:  ANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

A0A6J1JHB9 transcription initiation factor IIA large subunit-like isoform X26.3e-19092.03Show/hide
Query:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
        MA STSSIYINVIEDV+NKLRDEF DNGPGEDVLKELQGMWEAKMMQAGAV+GPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ
Subjt:  MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQ

Query:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNS
        TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPA TTPGGSA+NV+VRSGRP  +MQPPSWMGQ+ PVDVNIAYVEGRDEADRG  HP+ TQDFF+MNS
Subjt:  TPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNS

Query:  GKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYNI
        GKRKRD FASQYQT+GFIPQQDGAGDAANS+FEIEISGCNASDGRPG+ITSA SAT +HI RSL KIPQ DGPIPDPYDDVLSTPNIYNYQGVFNEDYNI
Subjt:  GKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYNI

Query:  ANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
        ANTPAPNDPPAGTPAVVTQDDVGEEEED EPSLNEDDDDDDLDDVDQGEE+STQHLVLAQFDKV
Subjt:  ANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

SwissProt top hitse value%identityAlignment
O08949 Transcription initiation factor IIA subunit 11.6e-0430.71Show/hide
Query:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPL
        +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++     +P         H      + T   +  T  +L P +  
Subjt:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPL

Query:  QTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP
         T  Q  +P +      N  +  S  + + T A PA  TP
Subjt:  QTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP

P52655 Transcription initiation factor IIA subunit 17.8e-0430.71Show/hide
Query:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPL
        +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++     +P         H      + T   +  T  +L P +  
Subjt:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPL

Query:  QTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP
         T  Q  +P +      N  +  S  + + T A PA  TP
Subjt:  QTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP

Q5RCU0 Transcription initiation factor IIA subunit 17.8e-0430.71Show/hide
Query:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPL
        +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G         ++     +P         H      + T   +  T  +L P +  
Subjt:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG--------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPL

Query:  QTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP
         T  Q  +P +      N  +  S  + + T A PA  TP
Subjt:  QTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP

Q99PM3 Transcription initiation factor IIA subunit 17.8e-0430.28Show/hide
Query:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG----------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPT
        +Y +VIEDVIN +RD F+D+G  E VL EL+ +WE K+MQ+ AV G           +++    +          H    P + T   +  T  +L P +
Subjt:  IYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSG----------PIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPT

Query:  PLQTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP
           T  Q  +P +      N  +  S  + + T A PA  TP
Subjt:  PLQTPIQTPLPGTADNAMYNVPTGPSDHSASGTDASPAATTP

Arabidopsis top hitse value%identityAlignment
AT1G07470.1 Transcription factor IIA, alpha/beta subunit2.8e-10557.81Show/hide
Query:  TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT
        T+TS++YI+VIEDV+NK+R+EFI+N GPGE VL ELQG+WE KMMQAG ++GPIERS+  KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQT
Subjt:  TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT

Query:  PIQTPLPGTADN-AMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMN
        P+ TPLPGTADN +MYN+PTG SD+   GT+          +  N++V++ RP+PYM PPS W   R  +DVN+AYV+GRDE +RG ++   TQD F+ +
Subjt:  PIQTPLPGTADN-AMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMN

Query:  SGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYN
        SGKRKRDD ++ YQ  G IPQQDGA DA        I   N       I    +      +  S  KIPQ DGP+PDPYD++LSTPNIY+YQG  NE++N
Subjt:  SGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYN

Query:  IANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
         A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++TQHLVLAQFDKV
Subjt:  IANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

AT1G07480.1 Transcription factor IIA, alpha/beta subunit2.8e-10557.81Show/hide
Query:  TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT
        T+TS++YI+VIEDV+NK+R+EFI+N GPGE VL ELQG+WE KMMQAG ++GPIERS+  KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQT
Subjt:  TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT

Query:  PIQTPLPGTADN-AMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMN
        P+ TPLPGTADN +MYN+PTG SD+   GT+          +  N++V++ RP+PYM PPS W   R  +DVN+AYV+GRDE +RG ++   TQD F+ +
Subjt:  PIQTPLPGTADN-AMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMN

Query:  SGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYN
        SGKRKRDD +  YQ  G IPQQDGAGDA        I   N       I +  +         S  KIPQ DGP+PDPYD++LSTPNIY+YQG  +E++N
Subjt:  SGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYN

Query:  IANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
         A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++TQHLVLAQFDKV
Subjt:  IANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

AT1G07480.2 Transcription factor IIA, alpha/beta subunit2.8e-10557.81Show/hide
Query:  TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT
        T+TS++YI+VIEDV+NK+R+EFI+N GPGE VL ELQG+WE KMMQAG ++GPIERS+  KPTPGGP+T  HDLNVPYEGTEEYETPTA++LFPPTPLQT
Subjt:  TSTSSIYINVIEDVINKLRDEFIDN-GPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT

Query:  PIQTPLPGTADN-AMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMN
        P+ TPLPGTADN +MYN+PTG SD+   GT+          +  N++V++ RP+PYM PPS W   R  +DVN+AYV+GRDE +RG ++   TQD F+ +
Subjt:  PIQTPLPGTADN-AMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPS-WMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMN

Query:  SGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYN
        SGKRKRDD +  YQ  G IPQQDGAGDA        I   N       I +  +         S  KIPQ DGP+PDPYD++LSTPNIY+YQG  +E++N
Subjt:  SGKRKRDDFASQYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYN

Query:  IANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV
         A TPAPN+    TP  V  D +    ED E  LNEDDDDD+LDD++ GE+++TQHLVLAQFDKV
Subjt:  IANTPAPNDPPAGTPAVVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKV

AT5G59230.1 transcription factor-related3.7e-0942.06Show/hide
Query:  TSTSSIYINVIEDVINKLRDEFIDNGP-GEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT
        + TSS Y  VI+DVINK R + + NG   E VL ++Q MW+ KM+QAGA+SG IE S+ S PT     TPV                        T LQT
Subjt:  TSTSSIYINVIEDVINKLRDEFIDNGP-GEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQT

Query:  PIQTPLP
        P   PLP
Subjt:  PIQTPLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGCGACGAGTTCATTGATAATGGTCCTGGAGAGGACGTTCTCAAG
GAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCCGTGAGCGGTCCCATAGAGAGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCGATAACT
CCGGTTCACGATCTCAATGTTCCATATGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGATTTACTCTTTCCGCCGACGCCATTACAAACTCCAATTCAAACC
CCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCAACTGGACCCAGTGACCACTCTGCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGA
GGTAGCGCTAATAATGTTGAGGTCAGATCTGGAAGGCCAAACCCGTATATGCAACCACCTTCTTGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTAT
GTGGAGGGGCGTGATGAAGCAGACAGGGGAGCGGCTCACCCATCCCATACACAGGACTTTTTCTTGATGAACTCTGGGAAGCGAAAGCGTGACGATTTTGCTTCC
CAGTACCAGACTAGTGGTTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAATAGTATCTTTGAGATTGAGATAAGTGGATGCAATGCTTCTGATGGGAGA
CCTGGCATCATCACTTCTGCAAACAGTGCTACATCATCACATATTGCAAGATCATTATTGAAGATTCCTCAATTTGATGGACCCATACCTGATCCTTATGATGAT
GTGCTTTCGACACCCAATATATACAATTACCAGGGTGTCTTTAATGAAGACTACAACATAGCAAATACACCAGCACCTAATGACCCACCAGCTGGCACTCCTGCT
GTTGTCACTCAGGATGATGTTGGTGAGGAGGAGGAGGATAGTGAGCCTTCATTGAACGAAGATGACGACGACGACGATTTGGATGATGTGGATCAGGGAGAGGAA
TTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGATAAGGTACTTCTTTACTCCTGGTTGGTAGCTGCTGGGTGCAGCATATGCTTGAGCATCTTGAGCTTCCAG
CATGCCATTAAATATTTGTTTTTATGTTCTCAGCATATAGTGTACCTAATACTTACAATATGA
mRNA sequenceShow/hide mRNA sequence
CGCCTCTCTCCTCTTTCCCTTTCTCTCTCCCCTTCTCTCTCTCTCCCTCTCTTTCTCTCTCTCCCTCTTCTCGTCTCTCCTCTCCCTCGCCTCATCTGCCCTTCT
ACTTCACAGAACTCTACAAATTCAAGAAGCTCATACGGATCGTATGGATCTTCTTCCTTGATTTTTCTCTCCAATTTTCTAGAAGTTTCGATTCTGGGTTTCGCT
AGTGGAGGGAATCGGAGGTAGACAGAGCGAGGCGGATCCGTTATGGCGACTTCGACGAGCTCTATCTACATCAATGTCATCGAAGATGTCATCAACAAGCTTCGC
GACGAGTTCATTGATAATGGTCCTGGAGAGGACGTTCTCAAGGAGCTTCAAGGAATGTGGGAGGCGAAAATGATGCAAGCGGGTGCCGTGAGCGGTCCCATAGAG
AGGTCTGCGCCATCTAAGCCCACTCCCGGAGGTCCGATAACTCCGGTTCACGATCTCAATGTTCCATATGAGGGGACTGAAGAGTACGAAACTCCCACTGCTGAT
TTACTCTTTCCGCCGACGCCATTACAAACTCCAATTCAAACCCCTTTACCGGGAACTGCTGACAACGCGATGTATAATGTTCCAACTGGACCCAGTGACCACTCT
GCATCTGGAACTGATGCTTCTCCAGCTGCTACCACTCCTGGAGGTAGCGCTAATAATGTTGAGGTCAGATCTGGAAGGCCAAACCCGTATATGCAACCACCTTCT
TGGATGGGTCAAAGAACTCCTGTAGACGTTAATATTGCCTATGTGGAGGGGCGTGATGAAGCAGACAGGGGAGCGGCTCACCCATCCCATACACAGGACTTTTTC
TTGATGAACTCTGGGAAGCGAAAGCGTGACGATTTTGCTTCCCAGTACCAGACTAGTGGTTTTATACCACAGCAAGATGGAGCTGGAGATGCTGCCAATAGTATC
TTTGAGATTGAGATAAGTGGATGCAATGCTTCTGATGGGAGACCTGGCATCATCACTTCTGCAAACAGTGCTACATCATCACATATTGCAAGATCATTATTGAAG
ATTCCTCAATTTGATGGACCCATACCTGATCCTTATGATGATGTGCTTTCGACACCCAATATATACAATTACCAGGGTGTCTTTAATGAAGACTACAACATAGCA
AATACACCAGCACCTAATGACCCACCAGCTGGCACTCCTGCTGTTGTCACTCAGGATGATGTTGGTGAGGAGGAGGAGGATAGTGAGCCTTCATTGAACGAAGAT
GACGACGACGACGATTTGGATGATGTGGATCAGGGAGAGGAATTGAGCACACAGCATTTAGTTTTAGCTCAGTTTGATAAGGTACTTCTTTACTCCTGGTTGGTA
GCTGCTGGGTGCAGCATATGCTTGAGCATCTTGAGCTTCCAGCATGCCATTAAATATTTGTTTTTATGTTCTCAGCATATAGTGTACCTAATACTTACAATATGA
TAATTTTCATGTAATAGGTTACTCGTACCAAGAGTAGGTGGAAATGTACGCTAAAGGATGGAATTATGCATATTAACAACAAGGACATTCTCTTCAACAAGGCAA
CTGGGGAGTTCGACTTCTGATTTTTAATGGAGGCATCTTCATCGGCAGGCGGTTACCGGTAGCAGCGTTTTGAAAGAATTCCAGGAAGTTCGTTCATTGGGTGTT
TAAGTTGTCTTCAGTTAATATTTGTTTTGTGAACGCACGAGGGAAAAGGACATGTTGATTCCTTATGTTCATTTTGATGAATGTTATTAGCGTTTTGTATATAAC
GAATGAGAGCTCTTTCGGCCTTCAATGCATGGCAACTTGAGGATTTTCGAGAAAATTTATCATTGCTCTAATGGAATATATTTGTAACTTCAACCTCCGTATATT
TTGGCCTCTTTTTTCCCCTTCTAATAATGAATCATTGCATTGCTATTCAA
Protein sequenceShow/hide protein sequence
MATSTSSIYINVIEDVINKLRDEFIDNGPGEDVLKELQGMWEAKMMQAGAVSGPIERSAPSKPTPGGPITPVHDLNVPYEGTEEYETPTADLLFPPTPLQTPIQT
PLPGTADNAMYNVPTGPSDHSASGTDASPAATTPGGSANNVEVRSGRPNPYMQPPSWMGQRTPVDVNIAYVEGRDEADRGAAHPSHTQDFFLMNSGKRKRDDFAS
QYQTSGFIPQQDGAGDAANSIFEIEISGCNASDGRPGIITSANSATSSHIARSLLKIPQFDGPIPDPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPA
VVTQDDVGEEEEDSEPSLNEDDDDDDLDDVDQGEELSTQHLVLAQFDKVLLYSWLVAAGCSICLSILSFQHAIKYLFLCSQHIVYLILTI