; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g016060 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g016060
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr07:44837777..44838809
RNA-Seq ExpressionLcy07g016060
SyntenyLcy07g016060
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH00303.1 Ribonuclease H-like superfamily protein [Prunus dulcis]1.6e-0632.28Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N D AW   +   GVGW++ +  G  I AG     +  +  M EA+A+ E +   +E   D        + VESD + +IK+LN E   + EI  ++ +
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNI
        +  LS  A    F Y P  CN  AHN+
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNI

XP_015388376.1 uncharacterized protein LOC102612209 [Citrus sinensis]9.3e-0732.81Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N+DAA   S    G+G +I N  G +I A   +++ K  +  MEA+AIL GI     +     E +  P+++ESD  E+++L+    G  +EIS  ++E
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNIV
        I          S  + P  CN +AH+IV
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNIV

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]3.2e-0729.13Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N +AAW   +N+ G+GWI+ + +G +I A    I  + NI  +E  AI EG++ + +++         P+ +ESD +E I LL+ +  D +EI  +++E
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNI
        I  + +   + S  +     N +AH +
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNI

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.2e-0932.28Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N DA+W DS++  G+GWII +++G ++ AG+  +    N+K++EA AILEG++ +          +  PL +E+D  E+  LLN +  D ++   V++E
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNI
        I +L     + +FA      N  AH++
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNI

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]4.9e-0830.47Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKY-RDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVID
        +N DAAW   +N+ G+GWI+ + +G +I A    I  + NI  +E  AI EG++ + +++ R   +    P+ +ESD +E I LL+ +  D +EI  +++
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKY-RDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVID

Query:  EIGSLSRFAIVESFAYCPTNCNFLAHNI
        EI  +     + S  +     N +AH++
Subjt:  EIGSLSRFAIVESFAYCPTNCNFLAHNI

TrEMBL top hitse value%identityAlignment
A0A4Y1R838 Ribonuclease H-like superfamily protein7.7e-0732.28Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N D AW   +   GVGW++ +  G  I AG     +  +  M EA+A+ E +   +E   D        + VESD + +IK+LN E   + EI  ++ +
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNI
        +  LS  A    F Y P  CN  AHN+
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNI

A0A5N5H950 Ribonuclease H protein8.5e-0628.35Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N DAAW   S+  GVGW+I NF G L  AG  + N   +++++EA A+   ++   +K         H + +E+D   I++++N E G  + +  +I +
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNI
        I  L++     +  Y    CN  A  +
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNI

A0A6J1CP26 uncharacterized protein LOC1110134121.5e-0729.13Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N +AAW   +N+ G+GWI+ + +G +I A    I  + NI  +E  AI EG++ + +++         P+ +ESD +E I LL+ +  D +EI  +++E
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNI
        I  + +   + S  +     N +AH +
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNI

A0A6J1DNV9 uncharacterized protein LOC1110224035.7e-1032.28Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE
        +N DA+W DS++  G+GWII +++G ++ AG+  +    N+K++EA AILEG++ +          +  PL +E+D  E+  LLN +  D ++   V++E
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDE

Query:  IGSLSRFAIVESFAYCPTNCNFLAHNI
        I +L     + +FA      N  AH++
Subjt:  IGSLSRFAIVESFAYCPTNCNFLAHNI

A0A6J1DSV1 uncharacterized protein LOC1110236082.4e-0830.47Show/hide
Query:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKY-RDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVID
        +N DAAW   +N+ G+GWI+ + +G +I A    I  + NI  +E  AI EG++ + +++ R   +    P+ +ESD +E I LL+ +  D +EI  +++
Subjt:  MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKY-RDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVID

Query:  EIGSLSRFAIVESFAYCPTNCNFLAHNI
        EI  +     + S  +     N +AH++
Subjt:  EIGSLSRFAIVESFAYCPTNCNFLAHNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGGACGCTGCTTGGTTCGACTCTTCAAATTCTAGAGGAGTAGGATGGATTATCCATAACTTTGAAGGTTCTTTGATTGGAGCGGGAAGCATGAAGATC
AACAAGAAGGAAAATATTAAAATGATGGAAGCAAAAGCCATTTTAGAAGGGATTAAGAGGGTTATAGAGAAATATAGAGATTACCCGGAGCTGATCGATCATCCA
CTGGTGGTGGAATCTGATGTCGTCGAGATCATCAAGCTCCTCAACCTAGAAGCCGGAGACAATTCGGAAATTTCGCTAGTTATTGATGAAATTGGAAGCCTGTCG
AGGTTTGCAATAGTGGAATCTTTCGCTTACTGCCCCACGAATTGTAACTTTTTGGCGCATAATATTGTCGTGCTGCTGCTTTACAGGGCGATTTTGTGTGTTTTT
AGTTTTGATCCTTCCCGGAGCTTGAGAATGGATTCCGCCCAAGATGGGTATTGTTGTAAGGGTTGGTTTTTCTCCATTTTGGAGAAAGAAGTTGTTGTACCTAAC
TTTCCTTTCGTTTAA
mRNA sequenceShow/hide mRNA sequence
CTTATCCATTCATATCTACTACAAATTTTGCAAATTAATTGTAATTTGATTGGCCAAAGGCAAAGGTCAAAATAAACCTCATTTGATAAAAATACGGTTGGAACT
TACCACTTAAGTCGGCACACAGCCGTTTCAAATCAAAAGCGACGTGAACGGGCATTGAGTGATGACATCTAATAAATAACGACTGGCAACGCGACATTTGCCGCG
CGCTGAATGGTGCGTACTTCCCTGGGCCCGGTGGGCTTAATAGAACAACTAATACAGCTTGGTCCAATTTTCATTTTGGGCTCGTCCTTGGGCCCATACATTCAT
GGCCTTTTACGTAACTACCCCTTCTCAGCATAGTTATTTTACGCAATTACCCTCTCCTAAGGTCAAGAATTCCCTCATCCACTATCACAATGAATCTTTTCTTGT
AAATCAAAAAGTAAACTAATTAATAAATAAAAATTATAATGGGATCCACAAGTACCAGTCGAGGACCTCGAAGATGAACATGGACGCTGCTTGGTTCGACTCTTC
AAATTCTAGAGGAGTAGGATGGATTATCCATAACTTTGAAGGTTCTTTGATTGGAGCGGGAAGCATGAAGATCAACAAGAAGGAAAATATTAAAATGATGGAAGC
AAAAGCCATTTTAGAAGGGATTAAGAGGGTTATAGAGAAATATAGAGATTACCCGGAGCTGATCGATCATCCACTGGTGGTGGAATCTGATGTCGTCGAGATCAT
CAAGCTCCTCAACCTAGAAGCCGGAGACAATTCGGAAATTTCGCTAGTTATTGATGAAATTGGAAGCCTGTCGAGGTTTGCAATAGTGGAATCTTTCGCTTACTG
CCCCACGAATTGTAACTTTTTGGCGCATAATATTGTCGTGCTGCTGCTTTACAGGGCGATTTTGTGTGTTTTTAGTTTTGATCCTTCCCGGAGCTTGAGAATGGA
TTCCGCCCAAGATGGGTATTGTTGTAAGGGTTGGTTTTTCTCCATTTTGGAGAAAGAAGTTGTTGTACCTAACTTTCCTTTCGTTTAA
Protein sequenceShow/hide protein sequence
MNMDAAWFDSSNSRGVGWIIHNFEGSLIGAGSMKINKKENIKMMEAKAILEGIKRVIEKYRDYPELIDHPLVVESDVVEIIKLLNLEAGDNSEISLVIDEIGSLS
RFAIVESFAYCPTNCNFLAHNIVVLLLYRAILCVFSFDPSRSLRMDSAQDGYCCKGWFFSILEKEVVVPNFPFV