; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g016190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g016190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptiontRNA-intron lyase
Genome locationChr07:44965587..44967489
RNA-Seq ExpressionLcy07g016190
SyntenyLcy07g016190
Gene Ontology termsGO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000214 - tRNA-intron endonuclease complex (cellular component)
GO:0000213 - tRNA-intron endonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR006676 - tRNA-splicing endonuclease
IPR006677 - tRNA intron endonuclease, catalytic domain-like
IPR006678 - tRNA intron endonuclease, N-terminal
IPR011856 - tRNA endonuclease-like domain superfamily
IPR036167 - tRNA intron endonuclease, catalytic domain-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605517.1 tRNA-splicing endonuclease subunit Sen2-2, partial [Cucurbita argyrosperma subsp. sororia]5.6e-12490.72Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MG RWKGKGSEAKAL DPMSKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVTRWSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

KAG7035455.1 tRNA-splicing endonuclease subunit Sen2-2, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-12490.72Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MG RWKGKGSEAKAL DPMSKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVTRWSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

XP_022947592.1 tRNA-splicing endonuclease subunit Sen2-1-like isoform X1 [Cucurbita moschata]8.6e-12590.72Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVTRWSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

XP_022947593.1 tRNA-splicing endonuclease subunit Sen2-1-like isoform X2 [Cucurbita moschata]8.6e-12590.72Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVTRWSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

XP_023532286.1 tRNA-splicing endonuclease subunit Sen2-1-like [Cucurbita pepo subsp. pepo]1.3e-12591.14Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DPMSKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVTRWSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

TrEMBL top hitse value%identityAlignment
A0A6J1CYW3 tRNA-intron lyase1.1e-12088.33Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DPMSKIVL LQSSLT+SDAQGLLSGCSVLYQADEEQ DL NRACFGRPIVTA+KDKQWFQ G+EEAFYLS  L CLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG-HNENGRLRVWSDFLCTIRLCGSVAKTLLVL
        EKN E+LW+YMKSQK+TFPEFYKAYQ+LRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEG G  NENGRLRVWSDFLCTIRLCGSVAKTLLVL
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG-HNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPAKV
        ++NNNGSSS+SP  L+SY++EERTVTRWSPEQCRE+PAKV
Subjt:  TINNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPAKV

A0A6J1G6W2 tRNA-intron lyase4.2e-12590.72Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVTRWSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

A0A6J1G716 tRNA-intron lyase4.2e-12590.72Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVTRWSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

A0A6J1L2V2 tRNA-intron lyase2.5e-12289.03Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DPMSKIV  LQSSL +SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYL Y LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        E NFEELW YMKSQ +TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVT WSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

A0A6J1L4U3 tRNA-intron lyase2.5e-12289.03Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        MGPRWKGKGSEAKAL DPMSKIV  LQSSL +SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYL Y LNCLKIVDGQDC
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        E NFEELW YMKSQ +TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA
        +N+NG+ S+SP CL+SY++EERTVT WSPEQCRE+PA
Subjt:  INNNGSSSISPECLNSYTVEERTVTRWSPEQCRESPA

SwissProt top hitse value%identityAlignment
C3MQX7 tRNA-splicing endonuclease6.2e-0926.81Show/hide
Query:  QGLLSGCSVLYQADEEQADLLNRACFGRPI-VTAEKDK----QWFQFGMEEAFYLSYQLNCLKIVDGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRM
        + LL G  VL    +E   + +   +G+ I ++  KD     +  +  + E+ YL+ +   +K++D       +E+L++Y     + F   Y+ Y++LR 
Subjt:  QGLLSGCSVLYQADEEQADLLNRACFGRPI-VTAEKDK----QWFQFGMEEAFYLSYQLNCLKIVDGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRM

Query:  KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGE
        K ++VR G +YG DF  Y   P L H+ + V+ +   E
Subjt:  KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGE

Q5Z6B1 Probable tRNA-splicing endonuclease subunit Sen22.8e-6252.7Show/hide
Query:  GPRWK----GKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLS--GCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIV
        GPRWK    GK   + A  +PMS IV  L++S   S    +LS  G S +     EQA +LNRA FG  I  A   K WFQ   EE FYL + LNC+++ 
Subjt:  GPRWK----GKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLS--GCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIV

Query:  DGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEG-EGHNENGRLRVWSDFLCTIRLCGSVAK
           + + +  ELW Y +S   +FPE YKAY +LR+KNWVVR G QYG DFVAYRHHPALVHSEFAV+V+ EG E  N  GRL VWSD LC +R  GSVAK
Subjt:  DGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEG-EGHNENGRLRVWSDFLCTIRLCGSVAK

Query:  TLLVLTINNNGSSSI-SPECLNSYTVEERTVTRWSPEQCRE
        TLLVLTI+++    + SP+CL    V ERT+TRW  +QCRE
Subjt:  TLLVLTINNNGSSSI-SPECLNSYTVEERTVTRWSPEQCRE

Q97ZY3 tRNA-splicing endonuclease1.6e-0928.26Show/hide
Query:  QGLLSGCSVLYQADEEQADLLNRACFGRPIVTAE----KD-KQWFQFGMEEAFYLSYQLNCLKIVDGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRM
        + LL G  VL  + +E   L +   +G+PI  ++    KD  +  +  + E+ YL+ +   + +VD       +++L++Y   + + F   YK Y++LR 
Subjt:  QGLLSGCSVLYQADEEQADLLNRACFGRPIVTAE----KD-KQWFQFGMEEAFYLSYQLNCLKIVDGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRM

Query:  KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGE
        K ++VR G +YG DF  Y   P L H+ + V+ +   E
Subjt:  KNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGE

Q9LSS3 tRNA-splicing endonuclease subunit Sen2-21.1e-6955.51Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        M PRWK KG+EAKAL +P+SK V  LQ SL  +++ G LS C+VL   + EQA+LL+R CFGR +++AEK K+W Q   EEAF+L Y L C+KI     C
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
         +N  + W YMKS++  FP F+KAY +LR KNWV+R G QYGVDFVAYRHHP+LVHSE++VLV S      ++ RLRVWSD  C +RL GSVAKTLL L 
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNN--GSSSISPECLNSYTVEERTVTRWSPEQCRE
        +N N  G       CL ++TVEE+T++RWSPE  RE
Subjt:  INNN--GSSSISPECLNSYTVEERTVTRWSPEQCRE

Q9M1E8 tRNA-splicing endonuclease subunit Sen2-18.2e-7056.43Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKI-VDGQD
        M PRWK KG+EAKAL +P+SK V  L+SSLT+++A G LS C+VL   + E+A+LL+R CFGR +V AEKDK+W Q   EEAF+L Y+L C+KI + G+ 
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKI-VDGQD

Query:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL
         E N  +LW+ M S K  F   YKAY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV S G     N RL+VWSD  C++RL GSVAK+LLVL
Subjt:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINN--NGSSSISPECLNSYTVEERTVTRWSPEQCRESPAK
         +N   N      P CL  YTVEE+T+ RWSPE  RE   +
Subjt:  TINN--NGSSSISPECLNSYTVEERTVTRWSPEQCRESPAK

Arabidopsis top hitse value%identityAlignment
AT3G45577.1 tRNA-intron endonucleases5.7e-1847.96Show/hide
Query:  AQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKN
        A G LS C+V      EQA+LL+R CFGR +  AEKDK+W Q   EEAF+L Y+L C+KI        N  +LW+ ++S K  F   YKAY +LR KN
Subjt:  AQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDCEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKN

AT3G45590.1 splicing endonuclease 15.8e-7156.43Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKI-VDGQD
        M PRWK KG+EAKAL +P+SK V  L+SSLT+++A G LS C+VL   + E+A+LL+R CFGR +V AEKDK+W Q   EEAF+L Y+L C+KI + G+ 
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKI-VDGQD

Query:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL
         E N  +LW+ M S K  F   YKAY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV S G     N RL+VWSD  C++RL GSVAK+LLVL
Subjt:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINN--NGSSSISPECLNSYTVEERTVTRWSPEQCRESPAK
         +N   N      P CL  YTVEE+T+ RWSPE  RE   +
Subjt:  TINN--NGSSSISPECLNSYTVEERTVTRWSPEQCRESPAK

AT3G45590.2 splicing endonuclease 15.8e-7156.43Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKI-VDGQD
        M PRWK KG+EAKAL +P+SK V  L+SSLT+++A G LS C+VL   + E+A+LL+R CFGR +V AEKDK+W Q   EEAF+L Y+L C+KI + G+ 
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKI-VDGQD

Query:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL
         E N  +LW+ M S K  F   YKAY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV S G     N RL+VWSD  C++RL GSVAK+LLVL
Subjt:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINN--NGSSSISPECLNSYTVEERTVTRWSPEQCRESPAK
         +N   N      P CL  YTVEE+T+ RWSPE  RE   +
Subjt:  TINN--NGSSSISPECLNSYTVEERTVTRWSPEQCRESPAK

AT5G60230.1 splicing endonuclease 27.6e-7155.51Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        M PRWK KG+EAKAL +P+SK V  LQ SL  +++ G LS C+VL   + EQA+LL+R CFGR +++AEK K+W Q   EEAF+L Y L C+KI     C
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
         +N  + W YMKS++  FP F+KAY +LR KNWV+R G QYGVDFVAYRHHP+LVHSE++VLV S      ++ RLRVWSD  C +RL GSVAKTLL L 
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNN--GSSSISPECLNSYTVEERTVTRWSPEQCRE
        +N N  G       CL ++TVEE+T++RWSPE  RE
Subjt:  INNN--GSSSISPECLNSYTVEERTVTRWSPEQCRE

AT5G60230.2 splicing endonuclease 27.6e-7155.51Show/hide
Query:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC
        M PRWK KG+EAKAL +P+SK V  LQ SL  +++ G LS C+VL   + EQA+LL+R CFGR +++AEK K+W Q   EEAF+L Y L C+KI     C
Subjt:  MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
         +N  + W YMKS++  FP F+KAY +LR KNWV+R G QYGVDFVAYRHHP+LVHSE++VLV S      ++ RLRVWSD  C +RL GSVAKTLL L 
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNN--GSSSISPECLNSYTVEERTVTRWSPEQCRE
        +N N  G       CL ++TVEE+T++RWSPE  RE
Subjt:  INNN--GSSSISPECLNSYTVEERTVTRWSPEQCRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCCAAGATGGAAGGGGAAGGGTTCAGAAGCCAAAGCTCTAGTTGATCCCATGTCGAAGATTGTACTTCACCTTCAATCTTCTCTAACACGGTCGGATGCT
CAAGGATTATTATCTGGTTGCAGTGTACTTTATCAAGCAGATGAAGAACAAGCTGATCTTCTTAATCGTGCTTGTTTTGGTCGACCAATTGTTACAGCCGAGAAG
GATAAGCAATGGTTTCAATTCGGCATGGAGGAGGCTTTTTACTTGTCCTATCAATTGAATTGCCTTAAAATTGTCGATGGACAGGATTGTGAAAAGAATTTTGAA
GAGCTCTGGCAGTATATGAAGTCCCAAAAGTCTACATTCCCTGAGTTTTACAAGGCTTATCAAAATCTTCGGATGAAGAATTGGGTTGTGAGACCTGGATCTCAA
TATGGGGTTGATTTTGTGGCTTATCGTCACCATCCAGCACTCGTCCATTCTGAATTTGCGGTGCTTGTGTTGTCCGAAGGAGAAGGCCATAATGAAAATGGGCGA
TTGCGAGTTTGGTCTGATTTTCTTTGCACAATTCGGCTTTGTGGAAGCGTTGCAAAAACGCTGCTAGTTCTTACCATCAATAACAATGGAAGCAGTTCTATTTCT
CCTGAGTGTTTGAACAGTTACACAGTTGAAGAGCGCACAGTTACAAGATGGAGTCCAGAACAGTGCCGGGAAAGTCCTGCAAAAGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCCAAGATGGAAGGGGAAGGGTTCAGAAGCCAAAGCTCTAGTTGATCCCATGTCGAAGATTGTACTTCACCTTCAATCTTCTCTAACACGGTCGGATGCT
CAAGGATTATTATCTGGTTGCAGTGTACTTTATCAAGCAGATGAAGAACAAGCTGATCTTCTTAATCGTGCTTGTTTTGGTCGACCAATTGTTACAGCCGAGAAG
GATAAGCAATGGTTTCAATTCGGCATGGAGGAGGCTTTTTACTTGTCCTATCAATTGAATTGCCTTAAAATTGTCGATGGACAGGATTGTGAAAAGAATTTTGAA
GAGCTCTGGCAGTATATGAAGTCCCAAAAGTCTACATTCCCTGAGTTTTACAAGGCTTATCAAAATCTTCGGATGAAGAATTGGGTTGTGAGACCTGGATCTCAA
TATGGGGTTGATTTTGTGGCTTATCGTCACCATCCAGCACTCGTCCATTCTGAATTTGCGGTGCTTGTGTTGTCCGAAGGAGAAGGCCATAATGAAAATGGGCGA
TTGCGAGTTTGGTCTGATTTTCTTTGCACAATTCGGCTTTGTGGAAGCGTTGCAAAAACGCTGCTAGTTCTTACCATCAATAACAATGGAAGCAGTTCTATTTCT
CCTGAGTGTTTGAACAGTTACACAGTTGAAGAGCGCACAGTTACAAGATGGAGTCCAGAACAGTGCCGGGAAAGTCCTGCAAAAGTGTGAAATGTACCAAGTAAG
ATGTAATGTGCGCTTTTTAGTTGTTATTGGATGTTTTCTGATTGTTCTTCATGTACAATGAAAATTGACTAGCTAGGGACACATAACAGGTTTAGTGTTAGATGG
GTTTTGAAAATGATATAGTCACAATCGTGTTCTTCCAATTACTTAACTTGAATATTTTTGGGTAAGAAATTGCTCAAATACACATCTTTTCGGAATAACTACATT
ACACTACTAAACAATTTAAAGGTCCAAAACCTCAAAATACATACACAGAGTCACAAATTTCTGATAAAGGATTAGTTGAAGTTAAACTATGCCAAATCCTTCCTT
TGATACCATCTCTTTAGATTGGAAGGTCTTTTTCTAATCCTTCTTTTGGAAAGAGGGATGTCTTCTCCCTTTGAACCCTAGGTTGTGGTTTTTGAATGAAATTGT
CTCCGTTTCTTATATATATATATGCATGCATGTATATGTATATATAAACTATTCCAAATCCAATTAGCAAAAATTAGCATGAGATCCACGAAGTGACTATCAATT
GTAGAAGTTTGAATGTTGAATTATTCCTAAACTCAAAAGTTTAAGTTGATTAGGTAGATTATATTTAATCTTTTATTTATGGTCTTAAGATTTGAATATGTATCT
AGTTGGAGTGTGAGTTCTCCATTCGTAGTTTCCTCCAGGAGAATTCATCTCTATTGATTGTTGCTGTTCCCTAATGCCCGAATTGGAATGTCATAAACAAGACAG
TGTTGTATGTAGATGCATGTTCCTCCAGCTCTTCTTGAACCTTCTATGCAAGACTTGTAGTCAAAATAGAGTTCTTCTTGAAAATTGCTCCTTTTGGATTGTCTA
ACTGCCAGTTCAAAATGTCTCATTATATATAGACATGGGCTCTCACTCTCTCCGTGGAATCTGTGTCAAAAATTGAACAAATCAGATTGAAAGTATTAGACTACA
GCATGCAATTATATTCTGTACGTAATAAAGCCATTAGTCAAAGTTCTTGCAAAAAAACGACTTGCAAGTATTATCATTCTCTGTTGCATATGAGCATGCATTGTA
CATAATTGTATGACTAGAAAAGTATTGTATAGTAAGGTATATGTACTTGAAAGATCATAATTATGTAACTATCATATAATTGAATGAAAATGGGAACATCCTGTT
TTCTGAAATAGGC
Protein sequenceShow/hide protein sequence
MGPRWKGKGSEAKALVDPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYQLNCLKIVDGQDCEKNFE
ELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLTINNNGSSSIS
PECLNSYTVEERTVTRWSPEQCRESPAKV