; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g016380 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g016380
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationChr07:45113874..45114904
RNA-Seq ExpressionLcy07g016380
SyntenyLcy07g016380
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]1.0e-4090.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTSA+ STGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_008463929.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]1.3e-4090.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTSA  STGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_022140347.1 protein transport protein Sec61 subunit beta [Momordica charantia]3.4e-4191.59Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGV APRGSAAATAGLRRRRL ST +AGS G+V  GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARS AGV
Subjt:  ARSAAGV

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]1.5e-4496.26Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTS AG+TGLV+GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]3.7e-4395.33Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARG SQSQS SSSTSRPGVVAPRGSAAATAGLRRRR GSTSAA STGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta4.9e-4190.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTSA+ STGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A5D3CTD4 Protein transport protein Sec61 subunit beta6.3e-4190.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTSA  STGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1CGL0 Protein transport protein Sec61 subunit beta1.7e-4191.59Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGV APRGSAAATAGLRRRRL ST +AGS G+V  GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARS AGV
Subjt:  ARSAAGV

A0A6J1H102 Protein transport protein Sec61 subunit beta7.2e-4596.26Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTS AG+TGLV+GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

A0A6J1JZ65 Protein transport protein Sec61 subunit beta7.2e-4596.26Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTS AG+TGLV+GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta7.5e-0742.27Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        MA   SQ+ +  +   R    AP G+A A   LRRR +  +  +G+T             + FYTDD PG K+SP VV+ MSL FI FVT LHV GK
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

P38389 Protein transport protein Sec61 subunit beta1.2e-1566.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG      GG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

P60467 Protein transport protein Sec61 subunit beta1.7e-0640.21Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T +AG T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

P60468 Protein transport protein Sec61 subunit beta1.7e-0640.21Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T +AG T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Q9CQS8 Protein transport protein Sec61 subunit beta1.7e-0640.21Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T +AG T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein8.2e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG      GG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein8.2e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG      GG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein8.2e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG      GG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein8.2e-1766.67Show/hide
Query:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG      GG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein5.9e-3171.3Show/hide
Query:  MARGTSQSQ---SASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        MARG+SQSQ   S  SST+RPG+ APRGSAAATAG+RRRRLG      S G  +G  SG  NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVFGK
Subjt:  MARGTSQSQ---SASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

Query:  LYRARSAA
        LY  +S +
Subjt:  LYRARSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGGCACTTCTCAATCCCAATCCGCATCCTCCTCCACCTCCAGGCCCGGCGTCGTGGCCCCGCGCGGCTCCGCGGCGGCGACGGCCGGCCTCCGCCGT
CGCCGTCTCGGCTCCACTTCCGCCGCCGGCTCTACTGGACTTGTTGCCGGCGGATCAAGCGGCGGCGGCAACATGCTGAGGTTCTACACCGACGATGCTCCTGGC
TTGAAGATTTCTCCCACCGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGATTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTATCGCGCGCGATCCGCCGCT
GGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
AACTGAAGATTTCAGATTTTATAAGATAAGATCTAAACCTCTTTTTTTAATCAAAATAATTGGAATTAAAATAAACACAATGATCCTAACCTGCCTGCAATTTAC
GAAAGTACCCCCGATGTAAGGCGTTGGTTTGCCAATTCATTTTCACTATTGTTCCTTGGTCACTGAAGCTTCTGGTTTTTCCATTTTCCTTTTCTAATTTTCCAC
CGTTCTGTTCTCTCAAATTCACCTAATTCCGATCGTCTTCTCCGATTCTCAATCTATGGCCAGAGGCACTTCTCAATCCCAATCCGCATCCTCCTCCACCTCCAG
GCCCGGCGTCGTGGCCCCGCGCGGCTCCGCGGCGGCGACGGCCGGCCTCCGCCGTCGCCGTCTCGGCTCCACTTCCGCCGCCGGCTCTACTGGACTTGTTGCCGG
CGGATCAAGCGGCGGCGGCAACATGCTGAGGTTCTACACCGACGATGCTCCTGGCTTGAAGATTTCTCCCACCGTCGTCCTCGTCATGAGCCTCTGCTTCATCGG
ATTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTATCGCGCGCGATCCGCCGCTGGAGTTTAATCCTGTGTCTTTTTAGTCCGGATCTTTTCATTCCCTAGATG
AAATGGCTAGGTTTCGCTCTTGAACTGATGATATAACGCTTTGTTTTCGGCTTTTGCTCTGTAAATTTAACAATCGTTGTAGTTCCTTGAGGTTTCAATTTGATC
AGCTGTGGACGAATTAAAAGGAACGAGATAGTTCTTTTGCTGATATTGTCTCTTTAGTGATCTAGTTCTTGTGAGTAATGCGAATTGCCCGTTTTCCCTTTTTTT
TTTCGGTCTGTATATGGTGTTTACAAGCGATGAATATTAGCTGTTTCTTCTAGGTTTTATTTTGTATGAGTGGAGGTTCTTTATCTGGGCTCTTCTTATTAGCAA
TTGCGCATAAATTATGGATTATGTACCTTTTCTGATTGATACTCACACATTAGATTCGTTTTCTAAAGTTGAAGTTTGGTTTTGTT
Protein sequenceShow/hide protein sequence
MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLGSTSAAGSTGLVAGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAA
GV