CuGenDBv2

Gene ID	Lcy07g017930
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	UDP-N-acetylglucosamine1-carboxyvinyltransferase
Genome location	Chr07:46611413..46614732
RNA-Seq Expression	Lcy07g017930
Synteny	Lcy07g017930
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR027973 - Protein of unknown function DUF4602

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7010308.1 hypothetical protein SDJN02_27101 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-55

79.01

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK
        NS  MEP M+ RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG ASSN SR S GKRKP+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        + VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+AGKGRRKGGKKKN    K GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

XP_022152964.1 uncharacterized protein LOC111020577 [Momordica charantia]

3.7e-55

76.79

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Query:  STHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPKDH
        ST +EPDM+ RNI KEI FLTSSHMSWKDKKEIENRK+VSLGGK QKKQ+LPLSVARPIMKKQKEREQKM++E LNLG   G   +NSRRS GKRKP+D 
Subjt:  STHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPKDH

Query:  VLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        VL+ SEGIFR GVLDVKHLLHRAPT        RN+D GN++ GKGRRKGGKKKNKSKKKGGG KKRH
Subjt:  VLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

XP_022944773.1 uncharacterized protein LOC111449125 [Cucurbita moschata]

2.6e-56

79.63

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK
        NST MEP M+ RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG ASSN SR S GKRKP+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        + VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+AGKGRRKGGKKKN    K GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

XP_022985670.1 uncharacterized protein LOC111483659 [Cucurbita maxima]

7.5e-56

79.01

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK
        NST MEP M+ RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPI+KKQKEREQKMVQE  N+  FGG+ASSN SR S GKRKP+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
          VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+AGKGRRKGGKKKN    K GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

XP_023511857.1 uncharacterized protein LOC111776750 [Cucurbita pepo subsp. pepo]

1.7e-55

78.4

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK
        NST +EP M+ RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG+ASSN SR S GKRKP+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        + VLKSSEG F+ GVLDV HLL  AP+RNSD GNE+AGKGRRKGGKKKN    K GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEY3 Uncharacterized protein

6.0e-51

70.69

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIA-SSNSRRSSGKRKPK
        +ST ME  M  RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMVQE  ++  FGG+A SSNSR+SSGKR+P+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIA-SSNSRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        + VLKSSEG F+ GVLDVKHLL  +            P RN+D GNE+ G GRRKGGKKKN   KK GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

A0A1S3BNE0 uncharacterized protein LOC103491457

9.3e-52

71.26

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIA-SSNSRRSSGKRKPK
        +ST ME  M  RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMVQE  ++  FGG+A SSNSR+SSGKR+P+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIA-SSNSRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        + VLKSSEG F+ GVLDVKHLL  +            P RN+D GNE+ GKGRRKGGKKKN   KK GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRA------------PTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

A0A6J1DHM3 uncharacterized protein LOC111020577

1.8e-55

76.79

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Query:  STHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPKDH
        ST +EPDM+ RNI KEI FLTSSHMSWKDKKEIENRK+VSLGGK QKKQ+LPLSVARPIMKKQKEREQKM++E LNLG   G   +NSRRS GKRKP+D 
Subjt:  STHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPKDH

Query:  VLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        VL+ SEGIFR GVLDVKHLLHRAPT        RN+D GN++ GKGRRKGGKKKNKSKKKGGG KKRH
Subjt:  VLKSSEGIFRKGVLDVKHLLHRAPT--------RNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

A0A6J1FZ06 uncharacterized protein LOC111449125

1.2e-56

79.63

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK
        NST MEP M+ RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMVQE  N+  FGG ASSN SR S GKRKP+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
        + VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+AGKGRRKGGKKKN    K GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

A0A6J1JBZ2 uncharacterized protein LOC111483659

3.6e-56

79.01

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Query:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK
        NST MEP M+ RNIKKEIEFLTSSHMSWKDKKEIE+RK+VSLGGK QKKQRLPLSVARPI+KKQKEREQKMVQE  N+  FGG+ASSN SR S GKRKP+
Subjt:  NSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSN-SRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH
          VLKSSEG F+ GVLDVKHLL  AP+RNSD GNE+AGKGRRKGGKKKN    K GG KKRH
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G44820.1 unknown protein

5.4e-36

48.6

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Query:  MNSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPK
        M ST ++ ++ ++NI K++    SSHM+WKDKK +E++KV +LGGK QK  RLPLSVAR  MKKQK+RE+KM+++++ LG FGG  SS+ + +  KR P+
Subjt:  MNSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD-------------------SGNEVAGKGRRKGGKKKNKSKKKGGGSKK
        + VLKS+ GIF+ GVLDVKHLL   P+ +SD                    G  +  KG++KGGK KNK KKKGGG K+
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD-------------------SGNEVAGKGRRKGGKKKNKSKKKGGGSKK

AT2G44820.2 unknown protein

5.4e-36

48.6

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Query:  MNSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPK
        M ST ++ ++ ++NI K++    SSHM+WKDKK +E++KV +LGGK QK  RLPLSVAR  MKKQK+RE+KM+++++ LG FGG  SS+ + +  KR P+
Subjt:  MNSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPK

Query:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD-------------------SGNEVAGKGRRKGGKKKNKSKKKGGGSKK
        + VLKS+ GIF+ GVLDVKHLL   P+ +SD                    G  +  KG++KGGK KNK KKKGGG K+
Subjt:  DHVLKSSEGIFRKGVLDVKHLLHRAPTRNSD-------------------SGNEVAGKGRRKGGKKKNKSKKKGGGSKK

Sequences

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CDS sequence

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ATGAACTCGACGCATATGGAACCTGATATGGATTACAGAAATATCAAGAAGGAAATTGAGTTCCTGACCTCCTCTCATATGTCATGGAAAGACAAAAAAGAGATT
GAGAACAGAAAAGTTGTGTCTCTGGGTGGAAAGGGTCAAAAGAAGCAAAGACTGCCTCTAAGTGTAGCACGACCAATTATGAAGAAGCAGAAGGAAAGAGAACAA
AAGATGGTACAAGAGAGTTTGAATCTTGGACTATTCGGGGGGATTGCTAGTAGCAATTCTAGAAGATCATCTGGTAAGCGCAAGCCTAAGGACCATGTTCTTAAG
TCAAGCGAAGGCATTTTTAGAAAAGGAGTGCTTGATGTCAAGCATCTACTACACCGAGCTCCTACTAGGAATAGTGACTCTGGAAACGAAGTTGCCGGTAAGGGT
AGAAGGAAGGGAGGTAAAAAGAAGAATAAAAGTAAGAAAAAGGGTGGTGGCAGCAAGAAACGCCATTAA

mRNA sequence

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GCCAATGAGATGCTTTTTTAAATTTGAAGTCGTCTCTTGAACTTCTCTAATGAATTGTGTTTGGGATGAGAAGAGTTCATAGGTTTGTGTAATAAAAATAAGATG
ATAATAGATGTTGATTATTTTGTAGGAAGTCAATAAGTCGTTTTTTGAAAATTGAAGTTATCTCTTGAAATTCTCTAATGAATGGTGCTTGGAATGAGAACAAAC
TATAGGTTTTTCTGTAATAAAAATAAAATTGTAATAGATGTTGATTATTTTGTAGGGAATCAGTAAGTCGTTTTTTTTAAATTGAAGTCGCTTCTTGAAATTCTC
TAATGAATGGTGCTTGGAATGAGAACATTTTGAAGGTTTTTGTGTTATAAAAATAAGATTATAATAGATTTTGATTGTTTTGTAGGAAGCTAATGAGTCGTTTTT
TGAAAATTGAAGTCGTCTCTTGAAATTCTCTAATGAATGGTGCTTTGAATGGGAACAGTCTGTAGGTTTTTGTGCAATAAAAAATAAAAATAAGAGTGTAATAGA
TATTTCATATTTTGTAGGAAGCCAATGAGCCTATTTTTGAAAACTGAAGTCGTTTCTTGAAATTCTCTAATGAATGGTATTTGGAATGAGAAGAGTCCATAGGTT
TTTGTGTAATAAAAATAAGATTATAATAGATGTTGACTACTTTGTAGGAAGTCAATGAGTCGTTTTTTAAAAATTGAAGTCGTCTCTTAAAATTCTCTAATGAAT
GGTGCTTGGAATGAGAAAGGTTCATTGGTTTTGTGTAATGAAAATAAAGGGGTTCATTAATTAATAATGTATTGGTAGGGTTGTGCGACAGCTATCTTGACCCAA
TCCACTCTCTCTTTTCCATCTTGCATTTTGTCTTAATTCCAATATATCCAATAGAATTAGATAAAATAGGCATATGTTTAAAATTTGGAGTGAAAAAGGGAGAGA
TAAAGTTTCTCTCTATAGCATCTTTTATATATATAGTTATACATATATATAGAGAGTATAGATTTGAAGTATCATAAGGCCATTTAGCCCAAGTACCCAATCTTT
TCTTGACGGTAAAATTAGGGCCTCCAATTTCTTCACGGCCTTCATTCTACAGTTTTCTCGGTTGAGTGGCTCTCATCTTCCTCATTCTGATAAACCGCCTCTCAG
AATTTTGTTTGAGTGTATACGAACGTCAACAGGCACGTAGCTACTGCAAACTTTTCTTCCATTGCCGCTTATCTTACTTTTTTCGTCGACTTGGAACACTCTTGA
TAAGTTGCATTCCAGAGACAAAAGTGCGAAAGGGGGATCATCTATGAACTCGACGCATATGGAACCTGATATGGATTACAGAAATATCAAGAAGGAAATTGAGTT
CCTGACCTCCTCTCATATGTCATGGAAAGACAAAAAAGAGATTGAGAACAGAAAAGTTGTGTCTCTGGGTGGAAAGGGTCAAAAGAAGCAAAGACTGCCTCTAAG
TGTAGCACGACCAATTATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGAGTTTGAATCTTGGACTATTCGGGGGGATTGCTAGTAGCAATTCTAG
AAGATCATCTGGTAAGCGCAAGCCTAAGGACCATGTTCTTAAGTCAAGCGAAGGCATTTTTAGAAAAGGAGTGCTTGATGTCAAGCATCTACTACACCGAGCTCC
TACTAGGAATAGTGACTCTGGAAACGAAGTTGCCGGTAAGGGTAGAAGGAAGGGAGGTAAAAAGAAGAATAAAAGTAAGAAAAAGGGTGGTGGCAGCAAGAAACG
CCATTAAAGTCATTCAATACCAAGAACATTCCTATTTTATAAGGGAATATGAATATGTATTGGCCTTATCAGTTATTGTAGTGCAATGGAATTTAGAGCATCCTT
CTTTCTCAAGGCATGTAGGTTTAATACGTCCAATTCTAGAAATCTTGGTTTTGTTTTTGACATTTTTCTTCATATCTGGCTCGTTCATTTGGGAAGTAACTCGGG
AATTGAAAATTCAAACAGAGGAATGTGCCAGTTATCTAGAAGTACAAGTTTTTCTTTTCTAAATAATAATTTTAAAGGAACAGAGATATGGGGTATCTTATCAAT
TTTT

Protein sequence

Show/hide protein sequence

MNSTHMEPDMDYRNIKKEIEFLTSSHMSWKDKKEIENRKVVSLGGKGQKKQRLPLSVARPIMKKQKEREQKMVQESLNLGLFGGIASSNSRRSSGKRKPKDHVLK
SSEGIFRKGVLDVKHLLHRAPTRNSDSGNEVAGKGRRKGGKKKNKSKKKGGGSKKRH

Lcy07g017930 (gene) of Sponge gourd (P93075) v1 genome