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Lcy08g005580 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy08g005580
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr08:7088190..7088803
RNA-Seq ExpressionLcy08g005580
SyntenyLcy08g005580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572337.1 hypothetical protein SDJN03_29065, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1050.63Show/hide
Query:  IRTPTAQIHDSSERFFRLLLLFAGNHGGRGAAQPGGLRHRSDMVLGVLMRRSNRVVPSANSLVLQGLDDADTGGYNPSS
        IRTPTA++HD S+RF  L+ L AG  G  G  +  GLR+R +MV GV++  S  +VP A+SL+L+GL DAD G +N  S
Subjt:  IRTPTAQIHDSSERFFRLLLLFAGNHGGRGAAQPGGLRHRSDMVLGVLMRRSNRVVPSANSLVLQGLDDADTGGYNPSS
TrEMBL top hitse value%identityAlignment
A0A328DM01 Uncharacterized protein6.8e-0441.67Show/hide
Query:  IRTPTAQIHDSSERFFRLLLLFAGNHGG---RGAAQPGG-LRHRSDMVLGVLMRRSNRVVPSANSLVLQGLDDADTGGYNPSSS
        IR+PTAQIHD S+R    L L     GG    G  QPGG L    ++  G+L+ +S  VVPS  +LVLQ L       ++P S+
Subjt:  IRTPTAQIHDSSERFFRLLLLFAGNHGG---RGAAQPGG-LRHRSDMVLGVLMRRSNRVVPSANSLVLQGLDDADTGGYNPSSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACAGATCCCCACCGGCGATTTCGTCTCAAGCTCGCCGAGAGCCTCTCCGGCAGCGGCGGCGGCGGTAGCTTTTAGGGTCAAAACCTCAATCTTGAACACC
AGGCGCTCAATTAGGACCCCAACAGCTCAAATACATGACAGTTCTGAGAGATTCTTCCGATTGCTTCTGCTGTTTGCCGGAAACCACGGCGGCCGAGGAGCCGCT
CAACCTGGTGGCCTGAGGCACCGATCTGACATGGTTCTTGGCGTATTGATGCGCCGATCTAATCGTGTGGTTCCATCGGCAAATTCCTTGGTCCTTCAAGGCCTC
GACGACGCCGACACTGGCGGCTACAATCCAAGCTCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
GTCGATACTCGTAATAATTAATTTCTTTTTAATCCTTGTGTTTTTTTTTAAAAAAAAAAAAAAGGAAAAAGAAATAAAAATTATTGTGCAAGAAAAGCGAAAGAT
AGAGAATAGGGAGAGTAATTGTTTGATTTTCATTAACAGCAAATCCCCAATTCAGTATACACCACTATGATACAGATCCCCACCGGCGATTTCGTCTCAAGCTCG
CCGAGAGCCTCTCCGGCAGCGGCGGCGGCGGTAGCTTTTAGGGTCAAAACCTCAATCTTGAACACCAGGCGCTCAATTAGGACCCCAACAGCTCAAATACATGAC
AGTTCTGAGAGATTCTTCCGATTGCTTCTGCTGTTTGCCGGAAACCACGGCGGCCGAGGAGCCGCTCAACCTGGTGGCCTGAGGCACCGATCTGACATGGTTCTT
GGCGTATTGATGCGCCGATCTAATCGTGTGGTTCCATCGGCAAATTCCTTGGTCCTTCAAGGCCTCGACGACGCCGACACTGGCGGCTACAATCCAAGCTCTTCT
TGATGAACTCATTTTTTGTTTCCCTTTTTCTTCTGATTTTTGCTCTTTTTTCTTGGCTTTGAAAGTTTTGTGTTTTTTGATTCTGATGA
Protein sequenceShow/hide protein sequence
MIQIPTGDFVSSSPRASPAAAAAVAFRVKTSILNTRRSIRTPTAQIHDSSERFFRLLLLFAGNHGGRGAAQPGGLRHRSDMVLGVLMRRSNRVVPSANSLVLQGL
DDADTGGYNPSSS