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Lcy08g009290 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy08g009290
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationChr08:22826304..22826765
RNA-Seq ExpressionLcy08g009290
SyntenyLcy08g009290
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79190.1 hypothetical protein VITISV_000232 [Vitis vinifera]1.3e-1546.67Show/hide
Query:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW
        PP R   +  +TW N +      R+DR ++S  W  LF    Q + PR TSDHWP+++ + P K GP PFRFENMWL HPSFK S  + W
Subjt:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW

RVW15380.1 hypothetical protein CK203_082622 [Vitis vinifera]3.0e-1548.75Show/hide
Query:  YTWDN---SRARSRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW
        +TW N   S    R+DR ++S  W  LF    Q + PR TSDHWP+++ + P K GP PFRFEN+WL HPSFK S  + W
Subjt:  YTWDN---SRARSRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW

RVW20303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.9e-1647.78Show/hide
Query:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW
        PP R   +  +TW N +      R+DR ++S  W  LF    Q + PR TSDHWP+++ S P K GP PFRFENMWL HPSFK S  + W
Subjt:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW

RVW36856.1 hypothetical protein CK203_113729 [Vitis vinifera]3.0e-1539.82Show/hide
Query:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL
        WV      GL    W      G  P R   +  +TW N +      R+DR ++S  W   F    Q + PR TSDHWP+++ + P K GP PFRFENMWL
Subjt:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL

Query:  DHPSFKSSIMTRW
         HPSFK +    W
Subjt:  DHPSFKSSIMTRW

RVW90389.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.8e-1540.71Show/hide
Query:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL
        WV     AGL    W      G  P R   +  +TW N +      R+DR ++S  W   F    Q + PR TSDHWP+++ + P K GP PFRFENMWL
Subjt:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL

Query:  DHPSFKSSIMTRW
         HPSFK +    W
Subjt:  DHPSFKSSIMTRW

TrEMBL top hitse value%identityAlignment
A0A438CAL5 Transposon TX1 uncharacterized 149 kDa protein3.8e-1647.78Show/hide
Query:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW
        PP R   +  +TW N +      R+DR ++S  W  LF    Q + PR TSDHWP+++ S P K GP PFRFENMWL HPSFK S  + W
Subjt:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW

A0A438DN31 Uncharacterized protein1.5e-1539.82Show/hide
Query:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL
        WV      GL    W      G  P R   +  +TW N +      R+DR ++S  W   F    Q + PR TSDHWP+++ + P K GP PFRFENMWL
Subjt:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL

Query:  DHPSFKSSIMTRW
         HPSFK +    W
Subjt:  DHPSFKSSIMTRW

A0A438I0Z7 LINE-1 retrotransposable element ORF2 protein8.5e-1640.71Show/hide
Query:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL
        WV     AGL    W      G  P R   +  +TW N +      R+DR ++S  W   F    Q + PR TSDHWP+++ + P K GP PFRFENMWL
Subjt:  WVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWL

Query:  DHPSFKSSIMTRW
         HPSFK +    W
Subjt:  DHPSFKSSIMTRW

A5ARB2 Reverse transcriptase domain-containing protein1.5e-1548.75Show/hide
Query:  YTWDN---SRARSRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW
        +TW N   S    R+DR ++S  W  LF    Q + PR TSDHWP+++ + P K GP PFRFEN+WL HPSFK S  + W
Subjt:  YTWDN---SRARSRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW

A5BQD9 Reverse transcriptase domain-containing protein6.5e-1646.67Show/hide
Query:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW
        PP R   +  +TW N +      R+DR ++S  W  LF    Q + PR TSDHWP+++ + P K GP PFRFENMWL HPSFK S  + W
Subjt:  PPRRIPGAGIYTWDNSRAR---SRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPFRFENMWLDHPSFKSSIMTRW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCCCCCAGGTCTCGAGGTAGAAATGAGTTCTGGAACGAGCTGGGTGACCTTTCTGGCCTTTGCGGGTCTTACTGGTGCATTATGGGAGACTTTAATGTCA
CGAGGTTCCCCTCCGAGAAGGATTCCGGGGGCAGGGATCTATACTTGGGATAACAGCAGAGCTAGGTCGCGCATTGATAGATGTATGTTTTCCAAGGGGTGGATG
GATTTGTTCGACGATGTGAAACAAGCTTTAGGCCCAAGGGTAACCTCGGACCACTGGCCTTTAATAGTGTCCTCTGGCCCCCAAAAATTGGGACCATGCCCCTTT
AGGTTTGAGAACATGTGGTTGGACCATCCCTCCTTCAAATCCTCCATCATGACGCGGTGGAACACCGAGACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCCCCCAGGTCTCGAGGTAGAAATGAGTTCTGGAACGAGCTGGGTGACCTTTCTGGCCTTTGCGGGTCTTACTGGTGCATTATGGGAGACTTTAATGTCA
CGAGGTTCCCCTCCGAGAAGGATTCCGGGGGCAGGGATCTATACTTGGGATAACAGCAGAGCTAGGTCGCGCATTGATAGATGTATGTTTTCCAAGGGGTGGATG
GATTTGTTCGACGATGTGAAACAAGCTTTAGGCCCAAGGGTAACCTCGGACCACTGGCCTTTAATAGTGTCCTCTGGCCCCCAAAAATTGGGACCATGCCCCTTT
AGGTTTGAGAACATGTGGTTGGACCATCCCTCCTTCAAATCCTCCATCATGACGCGGTGGAACACCGAGACCTAG
Protein sequenceShow/hide protein sequence
MVPPGLEVEMSSGTSWVTFLAFAGLTGALWETLMSRGSPPRRIPGAGIYTWDNSRARSRIDRCMFSKGWMDLFDDVKQALGPRVTSDHWPLIVSSGPQKLGPCPF
RFENMWLDHPSFKSSIMTRWNTET