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Lcy08g010260 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy08g010260
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr08:30405747..30406067
RNA-Seq ExpressionLcy08g010260
SyntenyLcy08g010260
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152756.1 uncharacterized protein LOC111020399 [Momordica charantia]1.0e-0558.62Show/hide
Query:  LVASQST------TSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS
        L AS ST         Y N YFLHH+DNT+ VLVS+PLT +NYTS SRSM IAL++K+
Subjt:  LVASQST------TSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS

XP_022154608.1 uncharacterized protein LOC111021831 [Momordica charantia]1.5e-0458.18Show/hide
Query:  ASQSTTSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS-LDFI
        +S S     LN Y+LHH DNT  VLV+ PLT +NY+S SRSM IALS+K+ L FI
Subjt:  ASQSTTSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS-LDFI

XP_031736904.1 uncharacterized protein LOC105434586 isoform X1 [Cucumis sativus]1.4e-0569.05Show/hide
Query:  YLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS
        YLN YFLHHNDNTN VLV+  LT +NY S SR+MTI LS+K+
Subjt:  YLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS

XP_031736905.1 uncharacterized protein LOC105434586 isoform X2 [Cucumis sativus]1.4e-0569.05Show/hide
Query:  YLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS
        YLN YFLHHNDNTN VLV+  LT +NY S SR+MTI LS+K+
Subjt:  YLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS

XP_031736906.1 uncharacterized protein LOC105434586 isoform X3 [Cucumis sativus]1.4e-0569.05Show/hide
Query:  YLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS
        YLN YFLHHNDNTN VLV+  LT +NY S SR+MTI LS+K+
Subjt:  YLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS

TrEMBL top hitse value%identityAlignment
A0A6J1CMF8 uncharacterized protein LOC1110124689.5e-0556.86Show/hide
Query:  VASQSTTSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS
        VA+ S   +Y N Y+LHH+DNT+ VLVS+ L  +NYTS SRSM IAL++K+
Subjt:  VASQSTTSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS

A0A6J1DIP8 uncharacterized protein LOC1110203995.0e-0658.62Show/hide
Query:  LVASQST------TSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS
        L AS ST         Y N YFLHH+DNT+ VLVS+PLT +NYTS SRSM IAL++K+
Subjt:  LVASQST------TSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS

A0A6J1DKR8 uncharacterized protein LOC1110218317.3e-0558.18Show/hide
Query:  ASQSTTSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS-LDFI
        +S S     LN Y+LHH DNT  VLV+ PLT +NY+S SRSM IALS+K+ L FI
Subjt:  ASQSTTSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS-LDFI

A0A6J1DW89 uncharacterized protein LOC1110237022.8e-0457.14Show/hide
Query:  SSFLVASQSTTS---HYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS-LDFI
        SS    S ST S     LN Y+LHH DNT  V V+  LT DNYTS SRSM I LS+K+ LDFI
Subjt:  SSFLVASQSTTS---HYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKS-LDFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTAGATCATTTTGCTTTTCGCCTTTTTTTCCTGTTAGATTGCTTTCTTTCGTTGTTGAACCCAATCGTTTCTTCTTGGATTTTCTTATTTGGTTGCTTGTTACG
TTCACGACACCATGTCCTTAAAAATAGTTCTTTCTTGGTTGCTAGTCAATCTACTACTAGTCATTATTTAAACTCTTATTTTCTTCATCACAATGATAATACCAATTTTG
TTTTGGTCTCCAATCCATTAACTCGTGATAATTACACTTCATTGAGTCGTTCTATGACGATTGCATTATCCATGAAGAGCTTGGACTTTATTGCCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATTAGATCATTTTGCTTTTCGCCTTTTTTTCCTGTTAGATTGCTTTCTTTCGTTGTTGAACCCAATCGTTTCTTCTTGGATTTTCTTATTTGGTTGCTTGTTACG
TTCACGACACCATGTCCTTAAAAATAGTTCTTTCTTGGTTGCTAGTCAATCTACTACTAGTCATTATTTAAACTCTTATTTTCTTCATCACAATGATAATACCAATTTTG
TTTTGGTCTCCAATCCATTAACTCGTGATAATTACACTTCATTGAGTCGTTCTATGACGATTGCATTATCCATGAAGAGCTTGGACTTTATTGCCAAATGA
Protein sequenceShow/hide protein sequence
MVLDHFAFRLFFLLDCFLSLLNPIVSSWIFLFGCLLRSRHHVLKNSSFLVASQSTTSHYLNSYFLHHNDNTNFVLVSNPLTRDNYTSLSRSMTIALSMKSLDFIAK