; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy08g014560 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy08g014560
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr08:44679956..44680534
RNA-Seq ExpressionLcy08g014560
SyntenyLcy08g014560
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0005849 - mRNA cleavage factor complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21522.1 hypothetical protein TSUD_34850 [Trifolium subterraneum]7.4e-1050.7Show/hide
Query:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED
        M FD+G+E+ NVG+ G+ ++  G+ +L++  A+GDEMGEDL+GLV+AMAEE+ VDL E+  GF  VK+ ++
Subjt:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED

KAG6586228.1 hypothetical protein SDJN03_18961, partial [Cucurbita argyrosperma subsp. sororia]9.3e-2972.55Show/hide
Query:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAHIIQNAKY-DTKRREELKK
        MGFDHGIE+ NVGI GLGK+AIGIGN V SSANGDEMGEDL+GLVK M EEVGVDLSEMG GFVA KEAEDSPLD+  VLAH+++  +Y + +RR EL+ 
Subjt:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAHIIQNAKY-DTKRREELKK

Query:  KK
         K
Subjt:  KK

PNX77350.1 hypothetical protein L195_g033314, partial [Trifolium pratense]3.9e-1154.93Show/hide
Query:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED
        MGFD G+EE NVG+ G+ +   G+ +L++  A+GDEMGE+L+GLV+AMAEE+GVDL E+  GF  VK+ E+
Subjt:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED

RXI06115.1 hypothetical protein DVH24_018157 [Malus domestica]4.8e-0977.08Show/hide
Query:  DEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAH
        DE+GEDLI L KAMAEEVGVDL+EMGSGFVA++EAEDSPL L    AH
Subjt:  DEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAH

TrEMBL top hitse value%identityAlignment
A0A2K3LFP3 Uncharacterized protein (Fragment)1.9e-1154.93Show/hide
Query:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED
        MGFD G+EE NVG+ G+ +   G+ +L++  A+GDEMGE+L+GLV+AMAEE+GVDL E+  GF  VK+ E+
Subjt:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED

A0A2P2P042 Uncharacterized protein1.2e-0544.58Show/hide
Query:  HFIKHLLRILHPLTTNVQLNHPNTNRPKTLKPATQNFTNHALTKPILTKIRTGFKQRRKSVLVGNNPVILHGGKQEKGSLEGA
        HFIK  L ILH  T+ V+L HPN+   KTLKP + N      +   +TK RT  +Q RKSVLV  N  I H G++ K   +G+
Subjt:  HFIKHLLRILHPLTTNVQLNHPNTNRPKTLKPATQNFTNHALTKPILTKIRTGFKQRRKSVLVGNNPVILHGGKQEKGSLEGA

A0A2Z6M7Y1 Uncharacterized protein3.6e-1050.7Show/hide
Query:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED
        M FD+G+E+ NVG+ G+ ++  G+ +L++  A+GDEMGEDL+GLV+AMAEE+ VDL E+  GF  VK+ ++
Subjt:  MGFDHGIEENNVGISGLGKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAED

A0A498KK20 Uncharacterized protein2.3e-0977.08Show/hide
Query:  DEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAH
        DE+GEDLI L KAMAEEVGVDL+EMGSGFVA++EAEDSPL L    AH
Subjt:  DEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAH

A0A540LFP2 Uncharacterized protein6.5e-0477.14Show/hide
Query:  MAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAH
        MAEEVGVDL+EMGSGFVA++EAEDSPL L    AH
Subjt:  MAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATTTCATCAAACACCTTCTGCGCATCCTCCATCCTCTCACAACAAACGTACAACTCAACCACCCCAATACGAATAGACCCAAAACACTCAAACCCGCG
ACGCAAAACTTCACCAACCACGCACTGACCAAGCCTATACTCACAAAGATTCGAACAGGATTTAAGCAACGGCGCAAAAGTGTACTCGTCGGGAACAATCCTGTG
ATTCTTCATGGAGGAAAACAGGAGAAGGGATCGCTCGAAGGGGCCGGAAAGGGAATGGGCTTTGATCATGGAATTGAAGAGAATAATGTTGGGATTTCGGGATTG
GGAAAAGAGGCGATTGGCATAGGCAATCTTGTTGAAAGCTCCGCAAATGGAGATGAAATGGGCGAGGATTTGATTGGATTGGTGAAGGCCATGGCGGAGGAAGTG
GGCGTGGATTTGAGTGAGATGGGTTCGGGATTTGTGGCCGTGAAGGAGGCGGAGGATTCTCCGCTCGATCTCGCGACAGTTCTTGCTCATATTATACAGAATGCT
AAATACGATACAAAGAGAAGAGAAGAATTGAAGAAGAAGAAGAAGAGGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCATTTCATCAAACACCTTCTGCGCATCCTCCATCCTCTCACAACAAACGTACAACTCAACCACCCCAATACGAATAGACCCAAAACACTCAAACCCGCG
ACGCAAAACTTCACCAACCACGCACTGACCAAGCCTATACTCACAAAGATTCGAACAGGATTTAAGCAACGGCGCAAAAGTGTACTCGTCGGGAACAATCCTGTG
ATTCTTCATGGAGGAAAACAGGAGAAGGGATCGCTCGAAGGGGCCGGAAAGGGAATGGGCTTTGATCATGGAATTGAAGAGAATAATGTTGGGATTTCGGGATTG
GGAAAAGAGGCGATTGGCATAGGCAATCTTGTTGAAAGCTCCGCAAATGGAGATGAAATGGGCGAGGATTTGATTGGATTGGTGAAGGCCATGGCGGAGGAAGTG
GGCGTGGATTTGAGTGAGATGGGTTCGGGATTTGTGGCCGTGAAGGAGGCGGAGGATTCTCCGCTCGATCTCGCGACAGTTCTTGCTCATATTATACAGAATGCT
AAATACGATACAAAGAGAAGAGAAGAATTGAAGAAGAAGAAGAAGAGGAACTGA
Protein sequenceShow/hide protein sequence
MRHFIKHLLRILHPLTTNVQLNHPNTNRPKTLKPATQNFTNHALTKPILTKIRTGFKQRRKSVLVGNNPVILHGGKQEKGSLEGAGKGMGFDHGIEENNVGISGL
GKEAIGIGNLVESSANGDEMGEDLIGLVKAMAEEVGVDLSEMGSGFVAVKEAEDSPLDLATVLAHIIQNAKYDTKRREELKKKKKRN