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Lcy08g016540 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy08g016540
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionVQ domain-containing protein
Genome locationChr08:47191405..47192744
RNA-Seq ExpressionLcy08g016540
SyntenyLcy08g016540
Gene Ontology termsGO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063578.1 hypothetical protein E6C27_scaffold329G00880 [Cucumis melo var. makuwa]3.6e-0962.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA-HEMEVVKFSDD-MSSFLELDEQ
        MMIKAS+ALEFRAIVQQLTGF+S+ +   RR  K  SD    RT SS  HA  EMEV+KFSDD M+S L+ D+Q
Subjt:  MMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA-HEMEVVKFSDD-MSSFLELDEQ

KAG6599333.1 hypothetical protein SDJN03_09111, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2164.49Show/hide
Query:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHAH-EMEVVKFSDDMSS
        MGK  E +  +Q++SQNPTKVQRKPIKVKYISSPMMIKASNA EFRAIVQQLTGF S  S   R   KPP  A  +  S+STLHA+ +ME +K SD+MSS
Subjt:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHAH-EMEVVKFSDDMSS

Query:  FLELDEQ
         LE D++
Subjt:  FLELDEQ

KGN60779.1 hypothetical protein Csa_019238 [Cucumis sativus]1.0e-1962.93Show/hide
Query:  MGKSVEIQDNN------QRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA--HEMEVVK
        MGK  E Q  N      Q ++QNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGF+S ++   RR  K  SD    RT S+  HA  HEMEV+K
Subjt:  MGKSVEIQDNN------QRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA--HEMEVVK

Query:  FSDD--MSSFLELDEQ
        FSDD  M S L+ D Q
Subjt:  FSDD--MSSFLELDEQ

PON46081.1 VQ motif containing protein [Parasponia andersonii]5.2e-0868.75Show/hide
Query:  NQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD
        N  + Q P K ++KPIK+KYISSPMM++A NA EFRAIVQQLTG NSD
Subjt:  NQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD

XP_021282108.1 uncharacterized protein LOC110414990 [Herrania umbratica]5.6e-1043.8Show/hide
Query:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICR----------------RVDKPPSDADHRRTSSSTLH
        MGK   ++D+   +S+NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG NSD                       VD PP+  D +    +   
Subjt:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICR----------------RVDKPPSDADHRRTSSSTLH

Query:  AHEMEVVKFSDDMSSFLELDE
                F DDMSS LE DE
Subjt:  AHEMEVVKFSDDMSSFLELDE

TrEMBL top hitse value%identityAlignment
A0A061F1R9 VQ domain-containing protein3.3e-0863.16Show/hide
Query:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNS
        MGK   ++D+   ES+NPTK ++ PIK+KYISSP M+ ASNA EFRAIVQ+LTG NS
Subjt:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNS

A0A0A0LIA7 VQ domain-containing protein4.9e-2062.93Show/hide
Query:  MGKSVEIQDNN------QRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA--HEMEVVK
        MGK  E Q  N      Q ++QNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGF+S ++   RR  K  SD    RT S+  HA  HEMEV+K
Subjt:  MGKSVEIQDNN------QRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA--HEMEVVK

Query:  FSDD--MSSFLELDEQ
        FSDD  M S L+ D Q
Subjt:  FSDD--MSSFLELDEQ

A0A2P5BBD6 VQ motif containing protein2.5e-0868.75Show/hide
Query:  NQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD
        N  + Q P K ++KPIK+KYISSPMM++A NA EFRAIVQQLTG NSD
Subjt:  NQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSD

A0A5A7V7M1 VQ domain-containing protein1.7e-0962.16Show/hide
Query:  MMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA-HEMEVVKFSDD-MSSFLELDEQ
        MMIKAS+ALEFRAIVQQLTGF+S+ +   RR  K  SD    RT SS  HA  EMEV+KFSDD M+S L+ D+Q
Subjt:  MMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHA-HEMEVVKFSDD-MSSFLELDEQ

A0A6J1A533 uncharacterized protein LOC1104149902.7e-1043.8Show/hide
Query:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICR----------------RVDKPPSDADHRRTSSSTLH
        MGK   ++D+   +S+NPTK ++ PIK+KYISSPMM+KASNA EFRAIVQ+LTG NSD                       VD PP+  D +    +   
Subjt:  MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICR----------------RVDKPPSDADHRRTSSSTLH

Query:  AHEMEVVKFSDDMSSFLELDE
                F DDMSS LE DE
Subjt:  AHEMEVVKFSDDMSSFLELDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAGTCTGTAGAGATTCAAGACAACAATCAAAGGGAGTCCCAAAACCCCACAAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGAT
CAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAGCTCACTGGCTTCAACTCCGACGACTCCCTGATTTGCCGGAGAGTTGACAAACCTCCCTCCGACGCCG
ACCACCGTCGAACTTCATCTTCAACGTTACATGCACATGAAATGGAAGTTGTGAAATTCTCAGACGACATGTCGTCCTTCCTCGAACTGGATGAACAACAACTCCCACTA
ATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAGTCTGTAGAGATTCAAGACAACAATCAAAGGGAGTCCCAAAACCCCACAAAAGTTCAGAGAAAACCCATAAAAGTAAAGTACATTTCAAGTCCAATGATGAT
CAAAGCAAGCAATGCACTTGAGTTCAGAGCCATTGTTCAGCAGCTCACTGGCTTCAACTCCGACGACTCCCTGATTTGCCGGAGAGTTGACAAACCTCCCTCCGACGCCG
ACCACCGTCGAACTTCATCTTCAACGTTACATGCACATGAAATGGAAGTTGTGAAATTCTCAGACGACATGTCGTCCTTCCTCGAACTGGATGAACAACAACTCCCACTA
ATTTAG
Protein sequenceShow/hide protein sequence
MGKSVEIQDNNQRESQNPTKVQRKPIKVKYISSPMMIKASNALEFRAIVQQLTGFNSDDSLICRRVDKPPSDADHRRTSSSTLHAHEMEVVKFSDDMSSFLELDEQQLPL
I