; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy08g017730 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy08g017730
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionzinc finger Ran-binding domain-containing protein 2-like
Genome locationChr08:48432755..48434013
RNA-Seq ExpressionLcy08g017730
SyntenyLcy08g017730
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001876 - Zinc finger, RanBP2-type
IPR036443 - Zinc finger, RanBP2-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586405.1 hypothetical protein SDJN03_19138, partial [Cucurbita argyrosperma subsp. sororia]1.3e-7194.26Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYA+R SCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

XP_008457786.1 PREDICTED: uncharacterized RNA-binding protein C17H9.04c [Cucumis melo]1.2e-6687.79Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN        EVLAGDWYCNCGAHNYA+RSSCYRCNS  YKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDW

Query:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV
        IC+RIGCETHNYASRMECYKCKTPRDFGGAV
Subjt:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV

XP_022937997.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita moschata]1.1e-7093.44Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYA+RSSCYRCN+YKS DI ALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPR+FGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

XP_022966014.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita maxima]8.7e-7395.9Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGAHNYA+RSSCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

XP_023538268.1 zinc finger Ran-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]2.5e-7295.08Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYA+RSSCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LIX1 Uncharacterized protein6.1e-6485.94Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY +YN        EVLAGDWYCNCGAHNYA+RSSCY+CNS  YKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDW

Query:  ICNRIGCETHNYASRMECYKCKTPRDFG
        IC+RIGCETHNYASRMECYKCK PR FG
Subjt:  ICNRIGCETHNYASRMECYKCKTPRDFG

A0A1S3C6B6 uncharacterized RNA-binding protein C17H9.04c5.9e-6787.79Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDW
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TY +YN        EVLAGDWYCNCGAHNYA+RSSCYRCNS  YKS+DIGALPGWKSGDW
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTY-EYN------KTEVLAGDWYCNCGAHNYANRSSCYRCNS--YKSVDIGALPGWKSGDW

Query:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV
        IC+RIGCETHNYASRMECYKCKTPRDFGGAV
Subjt:  ICNRIGCETHNYASRMECYKCKTPRDFGGAV

A0A6J1CPG4 uncharacterized RNA-binding protein C17H9.04c-like5.0e-6687.5Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTE---VLAGDWYCNCGAHNYANRSSCYRCNS--YKSVD-IGALPGWKSGDWICN
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEY+KT+   +LAGDWYCNCGAHNYA+RS+CYRCNS  +K+VD IGALPGWKSGDWIC 
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTE---VLAGDWYCNCGAHNYANRSSCYRCNS--YKSVD-IGALPGWKSGDWICN

Query:  RIGCETHNYASRMECYKCKTPRDFGGAV
        RIGCE HNYASRMECYKC TPRDFGGAV
Subjt:  RIGCETHNYASRMECYKCKTPRDFGGAV

A0A6J1FCS1 zinc finger Ran-binding domain-containing protein 2-like5.1e-7193.44Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDP+TYE+NKTEVLAGDWYC+CGAHNYA+RSSCYRCN+YKS DI ALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPR+FGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

A0A6J1HSH3 zinc finger Ran-binding domain-containing protein 2-like4.2e-7395.9Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET
        MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYE+NKTEVLAGDWYC+CGAHNYA+RSSCYRCN+YKS DIGALPGWKSGDWICNRIGCET
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCET

Query:  HNYASRMECYKCKTPRDFGGAV
        HNYASRMECYKCKTPRDFGGAV
Subjt:  HNYASRMECYKCKTPRDFGGAV

SwissProt top hitse value%identityAlignment
O95218 Zinc finger Ran-binding domain-containing protein 21.7e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q19QU3 Zinc finger Ran-binding domain-containing protein 21.7e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q5R580 Zinc finger Ran-binding domain-containing protein 21.7e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q5ZLX5 Zinc finger Ran-binding domain-containing protein 23.5e-0835.64Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  CG  N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Q9R020 Zinc finger Ran-binding domain-containing protein 21.7e-0734.65Show/hide
Query:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS
        N   S GDW+C    C +VNF +R +C RCG          K GG +   T  E ++    A DW C  C   N+A RS C  CN+ K   +    G+  
Subjt:  NMNWSGGDWMC--GVCEHVNFKKREACQRCG--------YPKYGGPD--PTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRCNSYKSVDIGALPGWKS

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT1G48570.1 zinc finger (Ran-binding) family protein7.0e-0428.79Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRC
        GDW C  C ++NF   + C+ C   ++           KT    GDW C +C   N+    +C +C
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC-NCGAHNYANRSSCYRC

AT2G17975.1 zinc finger (Ran-binding) family protein7.7e-1130.07Show/hide
Query:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDW---YCNCGAHNYANRSSCYRCNSYKSVDIG----------------
        ++  W  GDW+C  C   N+  R  C++C       P     +   +E LA +W     N G  +   +S+ Y   S+  + +G                
Subjt:  MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDW---YCNCGAHNYANRSSCYRCNSYKSVDIG----------------

Query:  --ALPG-----WKSGDWICNRIGCETHNYASRMECYKCKTPRD
          AL G     W+ GDW+C    C+ HNYASR EC +CKT RD
Subjt:  --ALPG-----WKSGDWICNRIGCETHNYASRMECYKCKTPRD

AT2G26695.1 Ran BP2/NZF zinc finger-like superfamily protein2.0e-5158.39Show/hide
Query:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC---NCGAHNYANRSSCYRCN----------------SYKSVDIGAL
        M+W+GGDW+CG C+H NFKKRE+CQ+CGYPK+GG D +TY YN+TEV+AGDWYC   NCG+HNYA+R+SCYRC                 +Y +      
Subjt:  MNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYC---NCGAHNYANRSSCYRCN----------------SYKSVDIGAL

Query:  PGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFGG
        PGWK+GDW+C R+GC  HNYASR EC+KCKT RD+GG
Subjt:  PGWKSGDWICNRIGCETHNYASRMECYKCKTPRDFGG

AT3G15680.1 Ran BP2/NZF zinc finger-like superfamily protein1.8e-3139.61Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNK-TEVLAGDWYC---NCGAHNYANRSSCYRCNSYK--------------
        GDW C  C H+NF++R++CQRCG             +  +GG   + + +   ++V  GDWYC   NCG HN+A+RS+C++C ++K              
Subjt:  GDWMCGVCEHVNFKKREACQRCG-------------YPKYGGPDPTTYEYNK-TEVLAGDWYC---NCGAHNYANRSSCYRCNSYK--------------

Query:  ----SVDI--------GALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDF
              DI        G    WKSGDWIC RIGC  HN+ASRMEC++C  PRDF
Subjt:  ----SVDI--------GALPGWKSGDWICNRIGCETHNYASRMECYKCKTPRDF

AT5G25490.1 Ran BP2/NZF zinc finger-like superfamily protein6.3e-2937.11Show/hide
Query:  GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNK-TEVLAGDWYCN---CGAHNYANRSSCYRCNSYK---------------
        GDW C +C H+NF++R++CQRC  P+ GG            P  +++ +N   +V  GDWYCN   CG HN+ANRSSC++C + K               
Subjt:  GDWMCGVCEHVNFKKREACQRCGYPKYGG------------PDPTTYEYNK-TEVLAGDWYCN---CGAHNYANRSSCYRCNSYK---------------

Query:  SVDIGALPG------------------WKSGDWICNRIGCETHNYASRMECYKCKTPRD
         +++G   G                  WKSGDWIC R GC  HN+ASR EC++C  P++
Subjt:  SVDIGALPG------------------WKSGDWICNRIGCETHNYASRMECYKCKTPRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATATGAATTGGTCAGGAGGTGACTGGATGTGTGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCGAAATATGGTGGTCC
AGACCCGACAACCTACGAGTACAATAAGACAGAAGTCTTGGCAGGAGATTGGTATTGCAATTGTGGAGCTCACAACTACGCCAATAGGTCAAGTTGCTATAGATGTAATT
CATATAAGAGTGTCGATATTGGTGCCTTGCCTGGTTGGAAATCTGGAGATTGGATCTGCAATAGAATAGGATGTGAAACGCACAATTATGCTAGCAGGATGGAATGCTAC
AAATGCAAAACTCCAAGGGATTTTGGTGGAGCTGTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACCCTCACAAAACTTCCACAAAACCCTTCACAAAAGCACAAACAAACTAAACTTCCAATAAGAGAGAAGACGATGAATATGAATTGGTCAGGAGGTGACTGGATGTG
TGGTGTGTGTGAACATGTGAACTTCAAAAAGAGAGAAGCTTGTCAACGATGTGGGTACCCGAAATATGGTGGTCCAGACCCGACAACCTACGAGTACAATAAGACAGAAG
TCTTGGCAGGAGATTGGTATTGCAATTGTGGAGCTCACAACTACGCCAATAGGTCAAGTTGCTATAGATGTAATTCATATAAGAGTGTCGATATTGGTGCCTTGCCTGGT
TGGAAATCTGGAGATTGGATCTGCAATAGAATAGGATGTGAAACGCACAATTATGCTAGCAGGATGGAATGCTACAAATGCAAAACTCCAAGGGATTTTGGTGGAGCTGT
TTGAAGAAACTAATTTTTGAAGAACTCTTAGTGATGCTAATACTTGGCCAACTTACAAAGCTTCTTGGCATCTGATGCTCTCCAATTTGCTTTTTTTTTTTTTTTTCCTT
TTTGGGATTGGGGCTCTAATGCAATGAAAATCTTAAGAATTCCCTTTCTTAATCTCACTTTTCAACTAATTAATTAGAATTATACACTTTGTTGTCTCTCTCTCTCTTTT
TACCATTGAATTTCAAGGTCTCATTCTTGGGCCACCAACCAAGGGCTTTGAATTATGCCAAAGAGATAGAAGTGTATAAGAGAATAATATTACAACTTTGAGATTC
Protein sequenceShow/hide protein sequence
MNMNWSGGDWMCGVCEHVNFKKREACQRCGYPKYGGPDPTTYEYNKTEVLAGDWYCNCGAHNYANRSSCYRCNSYKSVDIGALPGWKSGDWICNRIGCETHNYASRMECY
KCKTPRDFGGAV