; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy08g019070 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy08g019070
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionGrowth-regulating factor
Genome locationChr08:49742230..49742652
RNA-Seq ExpressionLcy08g019070
SyntenyLcy08g019070
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0099402 - plant organ development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR031137 - Growth-regulating factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022946732.1 growth-regulating factor 5-like isoform X2 [Cucurbita moschata]6.7e-6187.14Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKM+R++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTGSVS TRLSMSI NSSQHDFSSIF SNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
XP_022999222.1 growth-regulating factor 5-like [Cucurbita maxima]1.0e-6188.57Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKMER++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTGSVS TRLSMSI NSSQHDFSSIFSSNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
XP_023546920.1 growth-regulating factor 5-like isoform X1 [Cucurbita pepo subsp. pepo]5.1e-6187.14Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKM+R++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTG+VS TRLSMSI NSSQHDFSSIFSSNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
XP_023546921.1 growth-regulating factor 5-like isoform X2 [Cucurbita pepo subsp. pepo]5.1e-6187.14Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKM+R++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTG+VS TRLSMSI NSSQHDFSSIFSSNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
XP_023546923.1 growth-regulating factor 1-like isoform X4 [Cucurbita pepo subsp. pepo]5.1e-6187.14Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKM+R++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTG+VS TRLSMSI NSSQHDFSSIFSSNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
TrEMBL top hitse value%identityAlignment
A0A6J1DMB1 Growth-regulating factor2.6e-5887.94Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASS+EDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQE+HYY      EMQ+KM R+EPQK MHHFFDEWSPKDRESWLD
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSS-QHDFSSIFSSNKHNES
        LDDKSSNTGSVSATRLSMSI N+S QHDFSSIF+SNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSS-QHDFSSIFSSNKHNES
A0A6J1DPG3 Growth-regulating factor2.6e-5887.94Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASS+EDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQE+HYY      EMQ+KM R+EPQK MHHFFDEWSPKDRESWLD
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSS-QHDFSSIFSSNKHNES
        LDDKSSNTGSVSATRLSMSI N+S QHDFSSIF+SNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSS-QHDFSSIFSSNKHNES
A0A6J1G4G2 Growth-regulating factor3.2e-6187.14Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKM+R++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTGSVS TRLSMSI NSSQHDFSSIF SNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
A0A6J1G4J3 Growth-regulating factor3.2e-6187.14Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKM+R++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTGSVS TRLSMSI NSSQHDFSSIF SNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
A0A6J1KAB2 Growth-regulating factor5.0e-6288.57Show/hide
Query:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD
        MRGFSASSMED WQLTPLTMSCSSSS RHKNCSALQGDYSSYLQLQSFG SPKQ+KQ++HYY +GKYNEMQSKMER++P+KTMHHFF EWSPKDRESW+D
Subjt:  MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLD

Query:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
        LDDKSSNTGSVS TRLSMSI NSSQHDFSSIFSSNKHNE+
Subjt:  LDDKSSNTGSVSATRLSMSIPNSSQHDFSSIFSSNKHNES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGCTTCTCTGCTTCGTCTATGGAAGATTCCTGGCAGCTAACTCCTCTGACAATGAGCTGCTCTTCCTCATCCTCCAGACACAAGAACTGCTCTGCTTTACAAGG
TGACTACTCTTCTTACTTGCAGCTTCAGAGCTTTGGCGATTCCCCTAAGCAACTCAAGCAAGAGGACCATTACTACGTGCTGGGAAAATACAATGAGATGCAGAGTAAGA
TGGAAAGAGATGAACCACAGAAGACTATGCATCACTTCTTTGATGAATGGTCTCCAAAAGACAGAGAATCGTGGCTTGATTTGGATGATAAGTCATCGAATACTGGCTCA
GTTTCTGCAACTCGGCTTTCAATGTCTATTCCTAACTCATCACAACATGACTTCTCCTCCATCTTCAGTTCCAACAAGCACAATGAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGCTTCTCTGCTTCGTCTATGGAAGATTCCTGGCAGCTAACTCCTCTGACAATGAGCTGCTCTTCCTCATCCTCCAGACACAAGAACTGCTCTGCTTTACAAGG
TGACTACTCTTCTTACTTGCAGCTTCAGAGCTTTGGCGATTCCCCTAAGCAACTCAAGCAAGAGGACCATTACTACGTGCTGGGAAAATACAATGAGATGCAGAGTAAGA
TGGAAAGAGATGAACCACAGAAGACTATGCATCACTTCTTTGATGAATGGTCTCCAAAAGACAGAGAATCGTGGCTTGATTTGGATGATAAGTCATCGAATACTGGCTCA
GTTTCTGCAACTCGGCTTTCAATGTCTATTCCTAACTCATCACAACATGACTTCTCCTCCATCTTCAGTTCCAACAAGCACAATGAAAGCTGA
Protein sequenceShow/hide protein sequence
MRGFSASSMEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEDHYYVLGKYNEMQSKMERDEPQKTMHHFFDEWSPKDRESWLDLDDKSSNTGS
VSATRLSMSIPNSSQHDFSSIFSSNKHNES