CuGenDBv2

Gene ID	Lcy09g005010
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CRM domain-containing protein
Genome location	Chr09:4437163..4438296
RNA-Seq Expression	Lcy09g005010
Synteny	Lcy09g005010
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR040286 - CRM domain-containing protein At3g25440-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6602411.1 CRM-domain containing factor CFM9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

9.9e-160

83.87

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ  TE + NMEE ESHSDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH
        AADRDWVAEEAAEKEELS IRYRNREEHGGR RKSDMRTNNSSDDE+EKP VWRQRDSKQRLY+SEEEDD+H N EEWDSDD QNAN+LDSD DDSDGAH
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH

Query:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS
        GIVK TRG GGRHDLAKN+SFKRNVEPFVRKRMD+E SEPE MLS+LESAMWQS+EE   EEDDMKV    + +YRSN+ DL HI+KDKKNN+LNDYDSS
Subjt:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS

Query:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR
        IDES+EA   YEHTDTK+K+NR  KSKN YNFVSK+TDSGKA+WDSD+ED+SGT RPQRHDYWSGSDE+D R
Subjt:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

KAG7033088.1 putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

4.5e-160

84.14

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ  TE + NMEE ESHSDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH
        AADRDWVAEEAAEKEELS IRYRNREEHGGR RKSDMRTNNSSDDE+EKP VWRQRDSKQRLY+SEEEDD+H N EEWDSDD QNAN+LDSD DDSDGAH
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH

Query:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS
        GIVK TRG GGRHDLAKN+SFKRNVEPFVRKRMD+E SEPE MLS+LESAMWQS+EE   EEDDMKV    + +YRSN+ DL HIKKDKKNN+LNDYDSS
Subjt:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS

Query:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR
        IDES+EA   YEHTDTK+K+NR  KSKN YNFVSK+TDSGKA+WDSD+ED+SGT RPQRHDYWSGSDE+D R
Subjt:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

XP_022963886.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata]

1.4e-158

83.6

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ  TE + NMEE ESHSDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH
        AADRDWVAEEAAEKEELS IRYRNREEHGGR RKSDMRTNNSSDDE+EKP VWRQRDSKQRLY+SEEEDD+H NEEEWDSDD QNAN    D DDSDGAH
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH

Query:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS
        GIVK TRG GGRHDLAKN+SFKRNVEPFVRKRMD+E SEPE MLS+LESAMWQS+EE   EEDDMKV    + +YRSN+ DL HIKKDKKNN+LNDYDSS
Subjt:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS

Query:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR
        IDES+EA   YEHTDTK+K+NR  KSKN YNFVSK+TDSGKA+WDSD+ED+SGT RPQRHDYWSGSDE+D R
Subjt:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

XP_022990655.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]

3.2e-166

85.22

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ VTE + NMEE ESHSDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH
        AADRDWVAEEAAEKEELS IRYRNREEHGGR RKSDMRTNNSSDDE+EKP VWRQRDSKQRLYNSEEEDD+H NEEEWDSDD QNANNLDS++DDSDGAH
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH

Query:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS
        GI+K+TRG GGRHDLAKN+SFKRNVEPFVRKRMD+E SEPE MLS+LESAMWQS+EE   EEDDMKV    + +YRSN+DDL HIKKDKKNN+ NDYDSS
Subjt:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS

Query:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR
        IDES+EAYDRYEH DTK+K+NR  KSKN YNFVSK+TDSGKA+WDSD+ED+SGT RPQRHDYWSGSDE+D R
Subjt:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

XP_023550703.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita pepo subsp. pepo]

1.9e-158

83.6

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ  TE + NMEE ESHSDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH
        AADRDWVAEEAAEKEELS IRYRNREEHGGR RKSDMRTNNSSDDE+EKP VWRQRDSKQRLYNSEEEDD+H NEEEWDSDD QNAN    D DDSDGAH
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH

Query:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS
        GIVK TRG GGRHD AKN+SFKRNVEPFVRKRMD+E SEPE MLS+LESAMWQS+EE   EEDDMKV    + +YRSN+ DL HIKKDKKNN+LNDYDSS
Subjt:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS

Query:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR
        IDES+EA   YEHTDTK+K+NR  KSKN YNFVSK+TDSGKA+WDSD+ED+SGT RPQRHDYWSGSDE+D R
Subjt:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KSD9 CRM domain-containing protein

4.7e-155

82.88

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRV--TETKLNMEEVESHSDSDQEELDRFIAEI
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFYSDKQ V  T+TK NMEE ES SDSDQEELDRFIAEI
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRV--TETKLNMEEVESHSDSDQEELDRFIAEI

Query:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG
        EDAADRDWVAEEAAEKEELS +RYRNREEHGGRFRKSDMRTNN SDDEM+KPRVWRQRDSKQRLYNSEEED DHENEEEWDSDD QNANN  S TDDSDG
Subjt:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG

Query:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI
        AH IVKATR  GGRHDLAK +SF+RNV+PF R RMD EASEPENMLS+LE+ MWQSDEEEEDDMK+S+ VD +Y+ N+D L H+KKD +NNR NDYDSSI
Subjt:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI

Query:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEE
        DE DE+Y++++HT TKQKQ+R  KSK+ YN VSKDTDSGKAMWDSDDED+ GTLRPQR+DYWSGSDE+
Subjt:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEE

A0A1S3C9B5 uncharacterized CRM domain-containing protein At3g25440, chloroplastic

9.1e-143

82.39

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTE--TKLNMEEVESHSDSDQEELDRFIAEI
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ VTE  TK NMEE ES+SDSDQEELDRFIAEI
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTE--TKLNMEEVESHSDSDQEELDRFIAEI

Query:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG
        EDAADRDWVAEEAAEKEELS IRYRNREEHGGRFRKSDMR    SDDEM+KPRVWRQRDSKQRLYNSEEED DHENEEEWDSDD QNANN  S TDDSDG
Subjt:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG

Query:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI
        AH I+KATR TGGRHDLAK KSF+RNV+PF R RMD E SEPENMLS+LESAMWQSDEEEEDDM +SR VD +Y+ N+D L H+KKD +NNR NDYDSS+
Subjt:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI

Query:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSG
        DE DEAYD+++HT TKQKQ+R  KSK+ YN VS+DTDS KAMWDSDDED+ G
Subjt:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSG

A0A6J1BYA8 uncharacterized CRM domain-containing protein At3g25440, chloroplastic

1.1e-153

82.11

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ  T +K+NM E ES+SDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDD-DHENEEEWDSDDNQNANNLDSDTDDSDGA
        AADRDWVAEEAAEKEELS IRYRNREEHGGRFR+SDMRTN+SS++EMEKPRVWRQRDSKQRL++SEEEDD DHENEEEWDSDD +NANN++S TDDSDGA
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDD-DHENEEEWDSDDNQNANNLDSDTDDSDGA

Query:  HGIVKATRGTGGRHDLAKNKSFKRNV-EPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI
        HGIVKATRG  GRHDLAKNKSFKR+V +PFVRKRMDTEASEPENMLS+LESAMW+SDEEEEDDMKVSRYVD +Y+S +DD LH  K+ +NNRLNDYDS++
Subjt:  HGIVKATRGTGGRHDLAKNKSFKRNV-EPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI

Query:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEED
        DESDEAYDR+EH DTKQKQ R    KN YN+   D +SG AMWDSDDE++SG  R QR+DYWSGSDE+D
Subjt:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEED

A0A6J1HHB1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic

6.9e-159

83.6

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ  TE + NMEE ESHSDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH
        AADRDWVAEEAAEKEELS IRYRNREEHGGR RKSDMRTNNSSDDE+EKP VWRQRDSKQRLY+SEEEDD+H NEEEWDSDD QNAN    D DDSDGAH
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH

Query:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS
        GIVK TRG GGRHDLAKN+SFKRNVEPFVRKRMD+E SEPE MLS+LESAMWQS+EE   EEDDMKV    + +YRSN+ DL HIKKDKKNN+LNDYDSS
Subjt:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS

Query:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR
        IDES+EA   YEHTDTK+K+NR  KSKN YNFVSK+TDSGKA+WDSD+ED+SGT RPQRHDYWSGSDE+D R
Subjt:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

A0A6J1JQP1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic

1.5e-166

85.22

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED
        +ALFKARFEQALDSQKLNIKK EQELRRKGINPEDPVAMASIQRVASTFFNAIDKK+GTPYVFY DKQ VTE + NMEE ESHSDSDQEELDRFIAEIED
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIED

Query:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH
        AADRDWVAEEAAEKEELS IRYRNREEHGGR RKSDMRTNNSSDDE+EKP VWRQRDSKQRLYNSEEEDD+H NEEEWDSDD QNANNLDS++DDSDGAH
Subjt:  AADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAH

Query:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS
        GI+K+TRG GGRHDLAKN+SFKRNVEPFVRKRMD+E SEPE MLS+LESAMWQS+EE   EEDDMKV    + +YRSN+DDL HIKKDKKNN+ NDYDSS
Subjt:  GIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEE---EEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSS

Query:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR
        IDES+EAYDRYEH DTK+K+NR  KSKN YNFVSK+TDSGKA+WDSD+ED+SGT RPQRHDYWSGSDE+D R
Subjt:  IDESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

SwissProt top hits

e value

%identity

Alignment

Q9LT57 CRM-domain containing factor CFM9, mitochondrial

4.2e-44

42.69

Show/hide

Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKL-NMEEVE-SHSDSDQEELDRFIAEI
        +ALFKARFEQAL+SQKLNIKKTEQ+LRR G+NPEDPVAMASI RVASTFFNAIDKK+GTPYVF+ DKQ    T + N EE E    DSDQEELDRFIAEI
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKL-NMEEVE-SHSDSDQEELDRFIAEI

Query:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG
        E+AAD++W  EEAAE+EE   IRY NREE  GR R  ++R+   +     +                  + D H      DSDD+ +   LDS+ D+   
Subjt:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG

Query:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI
             +++     R      + FKR   P  R R   +    +++LS+L++ MW S++EE+           NY S+ DD      D+  NR     SS 
Subjt:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI

Query:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAM---WDSD
                       KQ + R   S++G N  +  + SGK     WDSD
Subjt:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAM---WDSD

Arabidopsis top hits

e value

%identity

Alignment

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein

3.0e-45

42.69

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Query:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKL-NMEEVE-SHSDSDQEELDRFIAEI
        +ALFKARFEQAL+SQKLNIKKTEQ+LRR G+NPEDPVAMASI RVASTFFNAIDKK+GTPYVF+ DKQ    T + N EE E    DSDQEELDRFIAEI
Subjt:  QALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKL-NMEEVE-SHSDSDQEELDRFIAEI

Query:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG
        E+AAD++W  EEAAE+EE   IRY NREE  GR R  ++R+   +     +                  + D H      DSDD+ +   LDS+ D+   
Subjt:  EDAADRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDG

Query:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI
             +++     R      + FKR   P  R R   +    +++LS+L++ MW S++EE+           NY S+ DD      D+  NR     SS 
Subjt:  AHGIVKATRGTGGRHDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSI

Query:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAM---WDSD
                       KQ + R   S++G N  +  + SGK     WDSD
Subjt:  DESDEAYDRYEHTDTKQKQNRTGKSKNGYNFVSKDTDSGKAM---WDSD

Sequences

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CDS sequence

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ATGACACTTGTTTGTTGTCCTATGCAGGCATTGTTCAAGGCCAGATTTGAACAAGCTCTCGATTCTCAGAAGCTAAACATAAAGAAGACAGAACAAGAGCTCAGACGTAA
GGGTATAAACCCAGAGGATCCAGTTGCTATGGCCAGCATCCAGAGAGTAGCTTCAACATTTTTTAATGCCATTGACAAAAAACAAGGTACCCCATACGTCTTCTACAGTG
ATAAGCAGAGAGTGACAGAGACTAAGCTTAACATGGAAGAAGTGGAATCTCATAGTGACAGTGACCAGGAAGAGTTAGACCGATTCATAGCTGAGATAGAGGATGCAGCA
GATCGAGATTGGGTTGCTGAGGAAGCAGCAGAGAAAGAAGAGCTTAGCCATATTAGGTATAGGAATAGAGAAGAACATGGTGGGAGATTCAGAAAATCCGATATGCGTAC
AAATAACAGTTCTGATGATGAGATGGAAAAGCCAAGAGTTTGGAGACAGAGAGATAGTAAACAAAGATTATACAATAGTGAAGAGGAAGATGATGATCATGAAAATGAGG
AGGAATGGGATTCTGATGATAATCAGAATGCTAACAATCTTGATAGTGATACTGATGATTCTGATGGAGCTCATGGGATCGTCAAGGCAACTCGAGGAACTGGAGGGAGG
CATGATTTGGCAAAAAATAAAAGTTTTAAGAGAAATGTCGAGCCCTTTGTCAGAAAAAGGATGGATACAGAAGCTTCTGAACCTGAAAATATGCTTAGCAATCTTGAAAG
TGCTATGTGGCAATCAGATGAGGAGGAAGAAGATGACATGAAAGTTTCAAGGTACGTAGATCATAATTACAGGAGCAATAAAGATGATTTGCTTCACATCAAGAAAGATA
AGAAGAACAATCGGTTGAATGATTATGACAGTAGCATTGATGAATCTGATGAAGCTTACGACAGATATGAACACACAGACACTAAACAAAAGCAGAATAGAACGGGAAAA
TCAAAGAATGGTTATAACTTTGTATCAAAAGATACAGATTCAGGAAAAGCAATGTGGGATTCAGATGATGAAGACGATTCAGGGACATTGAGACCTCAGAGACACGATTA
CTGGAGTGGCAGTGATGAAGAGGATGGTCGTTGA

mRNA sequence

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Protein sequence

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MTLVCCPMQALFKARFEQALDSQKLNIKKTEQELRRKGINPEDPVAMASIQRVASTFFNAIDKKQGTPYVFYSDKQRVTETKLNMEEVESHSDSDQEELDRFIAEIEDAA
DRDWVAEEAAEKEELSHIRYRNREEHGGRFRKSDMRTNNSSDDEMEKPRVWRQRDSKQRLYNSEEEDDDHENEEEWDSDDNQNANNLDSDTDDSDGAHGIVKATRGTGGR
HDLAKNKSFKRNVEPFVRKRMDTEASEPENMLSNLESAMWQSDEEEEDDMKVSRYVDHNYRSNKDDLLHIKKDKKNNRLNDYDSSIDESDEAYDRYEHTDTKQKQNRTGK
SKNGYNFVSKDTDSGKAMWDSDDEDDSGTLRPQRHDYWSGSDEEDGR

Lcy09g005010 (gene) of Sponge gourd (P93075) v1 genome