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Lcy09g009660 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g009660
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDynein light chain
Genome locationChr09:9924397..9927213
RNA-Seq ExpressionLcy09g009660
SyntenyLcy09g009660
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]2.8e-6496.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_022146325.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]2.5e-6596.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR+KFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKR ALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_022939677.1 dynein light chain LC6, flagellar outer arm [Cucurbita moschata]3.6e-6496.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]2.8e-6496.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR+KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]3.3e-6597.01Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFL+GLILKKKA EQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain1.3e-6496.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A1S3CSY6 Dynein light chain1.3e-6496.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        M+GAEMELERR+KFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1CWZ8 Dynein light chain1.2e-6596.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR+KFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKR ALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1FHG9 Dynein light chain1.8e-6496.27Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1I7W2 Dynein light chain5.1e-6494.78Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEGAEMELERR+KFLNGLILKKKA E QE RDRLN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm1.6e-1445.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DMP  +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V +LLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

O96860 Dynein light chain 2, cytoplasmic1.4e-1345.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q22799 Dynein light chain 1, cytoplasmic1.0e-1345.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q24117 Dynein light chain 1, cytoplasmic1.4e-1345.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q86A88 Dynein light chain, cytoplasmic6.1e-1444.71Show/hide
Query:  VRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
        + V+ +DMP  +Q  A  C  +  +    + D   +A+ +KKEFD  Y P WHCIVG SFGS+VTH    F+YF+I+K  +LLFK
Subjt:  VRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein2.4e-5378.12Show/hide
Query:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT
        MEG E+ELERR+KFLN LI KKKA EQQ+Q+D  NVRVRASDMP P QNRAFS +RE+L++ PGK D+KRLA ALKK+FDS+YGPAWHCIVGTSFGSYVT
Subjt:  MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSR
        HS GGFLYF IDKVY+LLFKTAVEPL +
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSR

AT1G52240.2 RHO guanyl-nucleotide exchange factor 119.7e-1543.18Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP
        V  SDMP  +Q +A + A + LD +    D K +A  +KKEFD  YG  W C+VG++FG + THS G F+YF ++ +  L+FK A  P
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP

AT3G16120.1 Dynein light chain type 1 family protein6.3e-1443.02Show/hide
Query:  RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA
        +V  +DMP  +Q +A   A + LD +    DS  +A  +KKEFD  YG  W C+VGT+FG + THS G F+YF +  +  L+FK A
Subjt:  RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA

AT4G27360.1 Dynein light chain type 1 family protein2.4e-1345.78Show/hide
Query:  SDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV
        +DM   ++  A S A + LD      +  ++A  +KKEFD SYG  W CIVGT FGS+VTH  G F++FS+  + ILLFK +V
Subjt:  SDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV

AT5G20110.1 Dynein light chain type 1 family protein1.5e-2862.5Show/hide
Query:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS
        + L VR+ A+DMP  +Q  AF CAR  LDS+  K  SK +A  LKKEFD  YGPAWHCIVG+SFGS+VTHS G F+YFS+DK+Y+LLFKT V P S
Subjt:  DRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGCGGAGATGGAGCTTGAGCGGCGGAACAAGTTTCTGAATGGACTGATTCTGAAGAAGAAGGCGGTGGAGCAGCAAGAGCAGCGCGATCGTCTCAATGTTCG
CGTCAGAGCTTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTCG
CCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGTTCATATGTCACACATTCTCTGGGTGGCTTCTTGTATTTTTCA
ATAGATAAAGTTTACATCCTTCTCTTCAAAACGGCAGTCGAGCCCCTGTCTCGTGGAACATCGTTAAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
CGCAATTCCAACCCTCCCTTGTCTTCCTCCTCGCGCCACTGTTTCTCTTTTTCTTCCTCTTCCCTTTGTCTTCTTCTTTCTTCTGCCAGACATTTTGTCGAACACTTTGC
GGGCAGGGCCTCATAGTTCTTCCCATTCTGAGTCTCTGAAGAAGATTAAGAAGGTGGGGTTGTTCTTGTGAAGCTCTTTTCCCCCCAATTTGATGAGATTGTAGTGCTGG
TGGGTCATGGAGGGAGCGGAGATGGAGCTTGAGCGGCGGAACAAGTTTCTGAATGGACTGATTCTGAAGAAGAAGGCGGTGGAGCAGCAAGAGCAGCGCGATCGTCTCAA
TGTTCGCGTCAGAGCTTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTG
CTCTCGCCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCTGCTTGGCATTGCATTGTGGGAACTAGCTTTGGTTCATATGTCACACATTCTCTGGGTGGCTTCTTGTAT
TTTTCAATAGATAAAGTTTACATCCTTCTCTTCAAAACGGCAGTCGAGCCCCTGTCTCGTGGAACATCGTTAAAAGATTGAGTTTCTCAATTCAAAACGAGGATCGAACA
CGCATCGATTTGATCGTAAAATCAACGGCTGCTGAAGTCATGAGCAAGAACAGCCAGGTTCAATCATACTATTCTTTTTTGTTGTCTCATTGACTTTATCTTGTTTAAGA
AACAGTGTGCTGCTCTGCTGTGATGTGAGTTGTGCATTACTATACTGGCTGATTATGAAATTTTGTTGTGTGCAGTCTAACAGCAAGGATTTGTGATGTTATAAGATTTT
ATGTTTATGCTTTAACTTCTTGGTTTGAGGCTAGTAAATAAAAAGCTTTACTACACTCTAAATGGAA
Protein sequenceShow/hide protein sequence
MEGAEMELERRNKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFS
IDKVYILLFKTAVEPLSRGTSLKD