; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g010660 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g010660
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr09:11414184..11415014
RNA-Seq ExpressionLcy09g010660
SyntenyLcy09g010660
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RYE02783.1 reverse transcriptase-like protein, partial [Rickettsiaceae bacterium]8.4e-1529.76Show/hide
Query:  EAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR-IPPHPDSWRLNVDASRNDHNSIGGVGWIWRDSSGS
        E  I I+WE+WNHRNN+L   ++ SQ  +++   S + E        + +G     T+++  PR  PP   +  +NVDA+        GVG I RD +G 
Subjt:  EAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR-IPPHPDSWRLNVDASRNDHNSIGGVGWIWRDSSGS

Query:  SICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCPRSLNVEAHN
         I      +   +S ++ E  A+L+G+  + ++   RA        +  D +GV+ ++++     +E+  ++  I R V E+E    +H  R  NV AHN
Subjt:  SICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCPRSLNVEAHN

Query:  LARLA
        LAR A
Subjt:  LARLA

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]2.9e-1530.84Show/hide
Query:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSA------MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG
        E+E   +++I W+IW  RN  +     P    I  A+D  I        ++        + L R     + A   PP  +SW+LN +A+     + GG+G
Subjt:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSA------MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG

Query:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP
        WI RD  G  I      I+   +I  LE+ AI EGL +   IR         PI +  D++  I+LL++   D +EI +L+ EI +++ ++E +S  H  
Subjt:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP

Query:  RSLNVEAHNLARLA
        R  N  AH LAR A
Subjt:  RSLNVEAHNLARLA

XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]9.3e-1429.33Show/hide
Query:  IDYWVWMIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRA-VDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR----IPPHPDSWRLNVDAS
        +DY+ W+  +  + + ++ ++++W IW +RN ++H+T     +  IRA  +SKI E    L          L  +    PR     PP    W+LNVDA+
Subjt:  IDYWVWMIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRA-VDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR----IPPHPDSWRLNVDAS

Query:  RNDHNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVA
          D    GG+GWI RDS G  I                 M   L+ L    T+ A         I +  D + V+N++NKS   L+E+S +V +I + + 
Subjt:  RNDHNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVA

Query:  EVERISFVHCPRSLNVEAHNLARLA
         +    F H P   N  AH +AR A
Subjt:  EVERISFVHCPRSLNVEAHNLARLA

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]5.2e-1730.7Show/hide
Query:  MIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG
        M++   +++L+  ++  W IWNHRN ++      S +++I+ +   ++E   Y +  S   L   KT  ++    PP    W LN DAS +D    GG+G
Subjt:  MIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG

Query:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP
        WI R   G  +  G   ++   ++K+LE  AILEGL +L  +   R      P+ +  D+  V +LLN+   DL++  ++V EI  L    E ++F    
Subjt:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP

Query:  RSLNVEAHNLARLAA
        R  N  AH+LA+ A+
Subjt:  RSLNVEAHNLARLAA

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]4.2e-1431.63Show/hide
Query:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKI--SEG-DDYLNSVSA---MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG
        E+E   +++I W+IW  RN  +          I   +D  I  S G D  L   SA   + L R     + A   PP  +SW+LN DA+     + GG+G
Subjt:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKI--SEG-DDYLNSVSA---MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG

Query:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLD-IPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHC
        WI RD  G  I      I+   +I  LE+ AI EGL ++          +   PI +  D++  I+LL++   D +EI +L+ EI +++ +++ +S  H 
Subjt:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLD-IPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHC

Query:  PRSLNVEAHNLARLA
         R  N  AH+LAR A
Subjt:  PRSLNVEAHNLARLA

TrEMBL top hitse value%identityAlignment
A0A4Q3DBE2 Reverse transcriptase-like protein (Fragment)4.1e-1529.76Show/hide
Query:  EAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR-IPPHPDSWRLNVDASRNDHNSIGGVGWIWRDSSGS
        E  I I+WE+WNHRNN+L   ++ SQ  +++   S + E        + +G     T+++  PR  PP   +  +NVDA+        GVG I RD +G 
Subjt:  EAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR-IPPHPDSWRLNVDASRNDHNSIGGVGWIWRDSSGS

Query:  SICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCPRSLNVEAHN
         I      +   +S ++ E  A+L+G+  + ++   RA        +  D +GV+ ++++     +E+  ++  I R V E+E    +H  R  NV AHN
Subjt:  SICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCPRSLNVEAHN

Query:  LARLA
        LAR A
Subjt:  LARLA

A0A6J1CP26 uncharacterized protein LOC1110134121.4e-1530.84Show/hide
Query:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSA------MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG
        E+E   +++I W+IW  RN  +     P    I  A+D  I        ++        + L R     + A   PP  +SW+LN +A+     + GG+G
Subjt:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSA------MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG

Query:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP
        WI RD  G  I      I+   +I  LE+ AI EGL +   IR         PI +  D++  I+LL++   D +EI +L+ EI +++ ++E +S  H  
Subjt:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP

Query:  RSLNVEAHNLARLA
        R  N  AH LAR A
Subjt:  RSLNVEAHNLARLA

A0A6J1D4B6 uncharacterized protein LOC1110171814.5e-1429.33Show/hide
Query:  IDYWVWMIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRA-VDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR----IPPHPDSWRLNVDAS
        +DY+ W+  +  + + ++ ++++W IW +RN ++H+T     +  IRA  +SKI E    L          L  +    PR     PP    W+LNVDA+
Subjt:  IDYWVWMIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRA-VDSKISEGDDYLNSVSAMGLPRLKTQLSQAPR----IPPHPDSWRLNVDAS

Query:  RNDHNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVA
          D    GG+GWI RDS G  I                 M   L+ L    T+ A         I +  D + V+N++NKS   L+E+S +V +I + + 
Subjt:  RNDHNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVA

Query:  EVERISFVHCPRSLNVEAHNLARLA
         +    F H P   N  AH +AR A
Subjt:  EVERISFVHCPRSLNVEAHNLARLA

A0A6J1DNV9 uncharacterized protein LOC1110224032.5e-1730.7Show/hide
Query:  MIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG
        M++   +++L+  ++  W IWNHRN ++      S +++I+ +   ++E   Y +  S   L   KT  ++    PP    W LN DAS +D    GG+G
Subjt:  MIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG

Query:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP
        WI R   G  +  G   ++   ++K+LE  AILEGL +L  +   R      P+ +  D+  V +LLN+   DL++  ++V EI  L    E ++F    
Subjt:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHCP

Query:  RSLNVEAHNLARLAA
        R  N  AH+LA+ A+
Subjt:  RSLNVEAHNLARLAA

A0A6J1DSV1 uncharacterized protein LOC1110236082.0e-1431.63Show/hide
Query:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKI--SEG-DDYLNSVSA---MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG
        E+E   +++I W+IW  RN  +          I   +D  I  S G D  L   SA   + L R     + A   PP  +SW+LN DA+     + GG+G
Subjt:  EKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKI--SEG-DDYLNSVSA---MGLPRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVG

Query:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLD-IPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHC
        WI RD  G  I      I+   +I  LE+ AI EGL ++          +   PI +  D++  I+LL++   D +EI +L+ EI +++ +++ +S  H 
Subjt:  WIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLD-IPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVERISFVHC

Query:  PRSLNVEAHNLARLA
         R  N  AH+LAR A
Subjt:  PRSLNVEAHNLARLA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.3e-0924.09Show/hide
Query:  YWVWMIENLIEKELEAAILI---MWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSW-RLNVDASRND
        YWV  +E  I K  +   L+   +W +W  RN L+          ++R       E             P+++  LS   + PP+   W + N DA+   
Subjt:  YWVWMIENLIEKELEAAILI---MWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSW-RLNVDASRND

Query:  HNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVE
         N   G+GWI R+ SG  +  G   +    ++   E++A+   + ++      R       I+   DA  ++NLLN S+     +   + +I +L+   E
Subjt:  HNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEVE

Query:  RISFVHCPRSLNVEAHNLAR
         + F   PR  N  A  +AR
Subjt:  RISFVHCPRSLNVEAHNLAR

AT4G29090.1 Ribonuclease H-like superfamily protein1.0e-1023.68Show/hide
Query:  YWVWMIEN---LIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSW-RLNVDASRND
        YWV+ + N     EK  +    ++W +W +RN L+      +   ++R  +  + E      + S    P++        R PPH   W + N DA+ N 
Subjt:  YWVWMIEN---LIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSW-RLNVDASRND

Query:  HNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEG-LHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEV
         N   G+GW+ R+  G         +K   +  + ++K++LE  L ++     S +      ++   D+  +I +LN  E     +   + ++ RL+++ 
Subjt:  HNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEG-LHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAEV

Query:  ERISFVHCPRSLNVEAHNLARLAAFSFL
          + FV  PR  N  A  +AR  + SFL
Subjt:  ERISFVHCPRSLNVEAHNLARLAAFSFL

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-0728.46Show/hide
Query:  IMWEIWNHRNNLLHN-TASPSQNSIIRAVDSKISEGDDYLNSVSAMGL----PRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVGWIWRDSSGSS
        +MW IW   N+L+ N T +  Q ++  A++      D+ + +    G     P   T+ S     PP  D  + N DAS ++ N++ G+GWI R+S G+ 
Subjt:  IMWEIWNHRNNLLHN-TASPSQNSIIRAVDSKISEGDDYLNSVSAMGL----PRLKTQLSQAPRIPPHPDSWRLNVDASRNDHNSIGGVGWIWRDSSGSS

Query:  ICEGFTRIKGRWSIKMLEMKAIL
        I  G  + +GR + +  E   ++
Subjt:  ICEGFTRIKGRWSIKMLEMKAIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTGCTTTTCGGATTGAACAATGATGCTTGGAAGCCTATCGACTATTGGGTTTGGATGATCGAGAATCTTATAGAGAAGGAGCTAGAAGCTGCTATCCTA
ATTATGTGGGAGATATGGAATCACAGGAATAATCTCTTGCACAACACAGCCAGTCCAAGCCAAAATTCCATTATCAGAGCAGTGGATTCTAAAATTTCAGAGGGA
GATGATTACCTCAATTCCGTCTCTGCTATGGGTCTACCAAGATTGAAGACCCAGCTGAGTCAAGCCCCTCGGATTCCTCCGCATCCCGATTCGTGGAGGCTCAAC
GTTGACGCCTCCCGTAACGATCATAATAGCATTGGTGGAGTGGGTTGGATCTGGCGTGACTCCTCAGGTTCTTCCATCTGCGAGGGGTTCACAAGAATTAAGGGT
AGATGGTCTATCAAGATGCTGGAGATGAAAGCGATTCTCGAAGGGTTGCATAGCTTACCAACCATTCGGGCTTCACGCGCTAACCTGGATATTCCGCCAATAGTG
GTGATGTATGACGCCATTGGCGTCATCAATCTGCTGAACAAATCTGAAGCAGACCTTTCAGAAATCTCCTTTTTGGTTGCCGAGATCGATCGTCTGGTTGCTGAG
GTCGAGAGAATCTCTTTCGTCCATTGCCCGCGCTCGCTGAATGTTGAAGCTCACAATCTCGCGCGCCTAGCTGCTTTCAGTTTTTTGGAGGGCTTTAGATGTCTT
TTGGATACTTCTTCCAATTCGGAAGGAGGTTTAGTTTTGTTGGGCCGGTTTGGGCCAGAATTTTTCTCCCCCAGTTTTATCGGGGCTGTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGTGCTTTTCGGATTGAACAATGATGCTTGGAAGCCTATCGACTATTGGGTTTGGATGATCGAGAATCTTATAGAGAAGGAGCTAGAAGCTGCTATCCTA
ATTATGTGGGAGATATGGAATCACAGGAATAATCTCTTGCACAACACAGCCAGTCCAAGCCAAAATTCCATTATCAGAGCAGTGGATTCTAAAATTTCAGAGGGA
GATGATTACCTCAATTCCGTCTCTGCTATGGGTCTACCAAGATTGAAGACCCAGCTGAGTCAAGCCCCTCGGATTCCTCCGCATCCCGATTCGTGGAGGCTCAAC
GTTGACGCCTCCCGTAACGATCATAATAGCATTGGTGGAGTGGGTTGGATCTGGCGTGACTCCTCAGGTTCTTCCATCTGCGAGGGGTTCACAAGAATTAAGGGT
AGATGGTCTATCAAGATGCTGGAGATGAAAGCGATTCTCGAAGGGTTGCATAGCTTACCAACCATTCGGGCTTCACGCGCTAACCTGGATATTCCGCCAATAGTG
GTGATGTATGACGCCATTGGCGTCATCAATCTGCTGAACAAATCTGAAGCAGACCTTTCAGAAATCTCCTTTTTGGTTGCCGAGATCGATCGTCTGGTTGCTGAG
GTCGAGAGAATCTCTTTCGTCCATTGCCCGCGCTCGCTGAATGTTGAAGCTCACAATCTCGCGCGCCTAGCTGCTTTCAGTTTTTTGGAGGGCTTTAGATGTCTT
TTGGATACTTCTTCCAATTCGGAAGGAGGTTTAGTTTTGTTGGGCCGGTTTGGGCCAGAATTTTTCTCCCCCAGTTTTATCGGGGCTGTTGTTTAG
Protein sequenceShow/hide protein sequence
MNVLFGLNNDAWKPIDYWVWMIENLIEKELEAAILIMWEIWNHRNNLLHNTASPSQNSIIRAVDSKISEGDDYLNSVSAMGLPRLKTQLSQAPRIPPHPDSWRLN
VDASRNDHNSIGGVGWIWRDSSGSSICEGFTRIKGRWSIKMLEMKAILEGLHSLPTIRASRANLDIPPIVVMYDAIGVINLLNKSEADLSEISFLVAEIDRLVAE
VERISFVHCPRSLNVEAHNLARLAAFSFLEGFRCLLDTSSNSEGGLVLLGRFGPEFFSPSFIGAVV