; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g010960 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g010960
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr09:11706761..11707432
RNA-Seq ExpressionLcy09g010960
SyntenyLcy09g010960
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0009694 - jasmonic acid metabolic process (biological process)
GO:0009850 - auxin metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016451.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-11690.95Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIFSEMQWE APSKFTFATLL ACANTFAL+QGKQIHGFMVRNNYEID+ VSGALVDMYCKCRQLEYALKVFENAASRDV+LWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELF +MMME+GI PDHVTFQGILLACVYENLVELGRQYFDSM DKFCIIPRLEHYEC+IELYGRHGNMDELE FINNMPFDPT PMLE++LDAC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHG+SRL E VA+RLNEQNL
Subjt:  RKHGNSRLAERVAVRLNEQNL

XP_022141462.1 pentatricopeptide repeat-containing protein At3g26540-like [Momordica charantia]8.6e-11993.67Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIF+EMQWETAPSKFTFATLLGACANTFA+EQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCR++EYALKVFEN ASRDVILWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELFRLM+MEEG+KPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHG MDELENFINNMPFDPT PMLERIL+AC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHGNS+L E VAVRLNE+NL
Subjt:  RKHGNSRLAERVAVRLNEQNL

XP_022938461.1 pentatricopeptide repeat-containing protein At3g26540 [Cucurbita moschata]2.0e-11590.5Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIFSEMQWE APSKFTFATLL ACANTFAL+QGKQIHGFMVRNNYEID+ VSGALVDMYCKCRQLEYALKVFENAASRDV+LWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELF +MMME+GI PDHVTFQGILLACVYENLVELGRQYFDSM DKFCIIPRLEHYEC+IELYGRHGNMDELE FINNMPFDPT PMLE++LDAC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHG+SRL E VA+RL EQNL
Subjt:  RKHGNSRLAERVAVRLNEQNL

XP_022993859.1 pentatricopeptide repeat-containing protein At3g26540 [Cucurbita maxima]1.8e-11691.86Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIFSEMQWE APSKFTFATLL ACANTFAL+QGKQIHGFMVRNNYEIDI VSGALVDMYCKCRQLEYALKVFENAASRDV+LWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELF++MMME+GI PDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELE FI NMPFDPT PMLE++LDAC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHG+SRL E VA+RLNEQNL
Subjt:  RKHGNSRLAERVAVRLNEQNL

XP_023550069.1 pentatricopeptide repeat-containing protein At3g26540 [Cucurbita pepo subsp. pepo]8.9e-11691.4Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIFSEMQWE APSKFTFATLL ACANTFAL+QGKQIHGFMVRNNYEIDI VSGALVDMYCKCRQLEYALKVFENAASRDV+LWNSIILGCCHN 
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELF++MMME+GI PDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELE FINNMPFDPT  MLE++LDAC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHG+SRL E VA+RLNEQNL
Subjt:  RKHGNSRLAERVAVRLNEQNL

TrEMBL top hitse value%identityAlignment
A0A0A0KFE0 Uncharacterized protein3.6e-10784.09Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIFSEMQ ET P+ FTFATLLGACAN FALE GKQIHGFMVRNNY IDIV++GALVDMYCKCR+L+YALKVFE+ ASRDV+LWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        R M+ I+LF+LM MEEGIKPDHVTFQGILLAC++ENLVELGR+YFDSMS+KFC+IPRLEHYECM+ELYG+HGNMDELE FINNMPFDPT PMLERI +AC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQN
        R+HG+SRLAE VA+RLNEQN
Subjt:  RKHGNSRLAERVAVRLNEQN

A0A5D3DJG9 Pentatricopeptide repeat-containing protein1.4e-10684.09Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMT FSEMQ ET P+ FTFATLLGACAN FALEQGKQIHGFMVRNNY IDIV++GALVDMYCKCR+LEYALKVFE+ ASRDV+LWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        R M+ IELF+ M MEEGIKPDHVTFQG+LLAC++ENL+ELGR+YFDSMS+KFCIIPRLEHYECM+ELYG+HGNMDELE FINNMPFDPT PMLERI +AC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQN
        R+HG+S LAE VAVRLNEQN
Subjt:  RKHGNSRLAERVAVRLNEQN

A0A6J1CJX1 pentatricopeptide repeat-containing protein At3g26540-like4.2e-11993.67Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIF+EMQWETAPSKFTFATLLGACANTFA+EQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCR++EYALKVFEN ASRDVILWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELFRLM+MEEG+KPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHG MDELENFINNMPFDPT PMLERIL+AC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHGNS+L E VAVRLNE+NL
Subjt:  RKHGNSRLAERVAVRLNEQNL

A0A6J1FD79 pentatricopeptide repeat-containing protein At3g265409.6e-11690.5Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIFSEMQWE APSKFTFATLL ACANTFAL+QGKQIHGFMVRNNYEID+ VSGALVDMYCKCRQLEYALKVFENAASRDV+LWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELF +MMME+GI PDHVTFQGILLACVYENLVELGRQYFDSM DKFCIIPRLEHYEC+IELYGRHGNMDELE FINNMPFDPT PMLE++LDAC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHG+SRL E VA+RL EQNL
Subjt:  RKHGNSRLAERVAVRLNEQNL

A0A6J1K1B7 pentatricopeptide repeat-containing protein At3g265408.7e-11791.86Show/hide
Query:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        MSEQAMTIFSEMQWE APSKFTFATLL ACANTFAL+QGKQIHGFMVRNNYEIDI VSGALVDMYCKCRQLEYALKVFENAASRDV+LWNSIILGCCHNR
Subjt:  MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
        RGMIVIELF++MMME+GI PDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELE FI NMPFDPT PMLE++LDAC
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRLNEQNL
        RKHG+SRL E VA+RLNEQNL
Subjt:  RKHGNSRLAERVAVRLNEQNL

SwissProt top hitse value%identityAlignment
O49399 Pentatricopeptide repeat-containing protein At4g188408.3e-4037.73Show/hide
Query:  QAMTIFSEMQWETA--PSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR
        + + +F++M  ++   P  FT  ++L ACA+  +L QG+ +H ++ ++  EI+  ++ ALVDMY KC +++ AL+VF   + RDV  WNSII     +  
Subjt:  QAMTIFSEMQWETA--PSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR

Query:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR
        G   +E+F   M+ EG KP+ +TF G+L AC +  +++  R+ F+ MS  + + P +EHY CM++L GR G ++E E  +N +P D  + +LE +L AC+
Subjt:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR

Query:  KHGNSRLAERVAVRLNEQNL
        + G    AER+A RL E NL
Subjt:  KHGNSRLAERVAVRLNEQNL

Q9FIB2 Putative pentatricopeptide repeat-containing protein At5g099503.7e-4042.63Show/hide
Query:  FTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRRGMIVIELFRLMMMEEGIKP
        F +AT+L A A+   LE+G ++H   VR   E D+VV  ALVDMY KC +L+YAL+ F     R+   WNS+I G   + +G   ++LF  M ++    P
Subjt:  FTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRRGMIVIELFRLMMMEEGIKP

Query:  DHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACRKHGNSRLAE
        DHVTF G+L AC +  L+E G ++F+SMSD + + PR+EH+ CM ++ GR G +D+LE+FI  MP  P   +   +L AC +  N R AE
Subjt:  DHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACRKHGNSRLAE

Q9LRV2 Pentatricopeptide repeat-containing protein At3g265403.9e-6657.21Show/hide
Query:  SEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR
        SEQA++ F  MQ E  PSK+T ATLL  CAN  AL  GK IHGF++R+ Y+ID+V+ GA+VDMY KCR  +YA++VF+ AA+RD+ILWNSII GCC N R
Subjt:  SEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR

Query:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR
           V ELF +++  EG+KPDHVTF GIL AC+ E  VELG QYF SMS K+ I P++EHY+CMIELY ++G + +LE F+  MPFDP   ML RI DAC+
Subjt:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR

Query:  KHGNSRLAERVAVRL
        ++  S+L    A RL
Subjt:  KHGNSRLAERVAVRL

Q9SIT7 Pentatricopeptide repeat-containing protein At2g136001.4e-3938.84Show/hide
Query:  SEQAMTIFSEMQWET-APSKFTFATLLGACANTFALEQGKQI------HGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIIL
        +E+A+++F  ++ E+  P+ ++FA +L ACA+   L  G Q       HGF  ++  E DI V  +L+DMY KC  +E    VF     RD + WN++I+
Subjt:  SEQAMTIFSEMQWET-APSKFTFATLLGACANTFALEQGKQI------HGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIIL

Query:  GCCHNRRGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLE
        G   N  G   +ELFR  M+E G KPDH+T  G+L AC +   VE GR YF SM+  F + P  +HY CM++L GR G ++E ++ I  MP  P + +  
Subjt:  GCCHNRRGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLE

Query:  RILDACRKHGNSRLAERVAVRLNE
         +L AC+ H N  L + VA +L E
Subjt:  RILDACRKHGNSRLAERVAVRLNE

Q9SY02 Pentatricopeptide repeat-containing protein At4g027503.0e-4238.43Show/hide
Query:  SEQAMTIFSEMQWETAP-SKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        S +A+ +F +M+ E    ++ +F++ L  CA+  ALE GKQ+HG +V+  YE    V  AL+ MYCKC  +E A  +F+  A +D++ WN++I G   + 
Subjt:  SEQAMTIFSEMQWETAP-SKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
         G + +  F   M  EG+KPD  T   +L AC +  LV+ GRQYF +M+  + ++P  +HY CM++L GR G +++  N + NMPF+P A +   +L A 
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRL
        R HGN+ LAE  A ++
Subjt:  RKHGNSRLAERVAVRL

Arabidopsis top hitse value%identityAlignment
AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-4038.84Show/hide
Query:  SEQAMTIFSEMQWET-APSKFTFATLLGACANTFALEQGKQI------HGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIIL
        +E+A+++F  ++ E+  P+ ++FA +L ACA+   L  G Q       HGF  ++  E DI V  +L+DMY KC  +E    VF     RD + WN++I+
Subjt:  SEQAMTIFSEMQWET-APSKFTFATLLGACANTFALEQGKQI------HGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIIL

Query:  GCCHNRRGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLE
        G   N  G   +ELFR  M+E G KPDH+T  G+L AC +   VE GR YF SM+  F + P  +HY CM++L GR G ++E ++ I  MP  P + +  
Subjt:  GCCHNRRGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLE

Query:  RILDACRKHGNSRLAERVAVRLNE
         +L AC+ H N  L + VA +L E
Subjt:  RILDACRKHGNSRLAERVAVRLNE

AT3G26540.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-6757.21Show/hide
Query:  SEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR
        SEQA++ F  MQ E  PSK+T ATLL  CAN  AL  GK IHGF++R+ Y+ID+V+ GA+VDMY KCR  +YA++VF+ AA+RD+ILWNSII GCC N R
Subjt:  SEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR

Query:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR
           V ELF +++  EG+KPDHVTF GIL AC+ E  VELG QYF SMS K+ I P++EHY+CMIELY ++G + +LE F+  MPFDP   ML RI DAC+
Subjt:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR

Query:  KHGNSRLAERVAVRL
        ++  S+L    A RL
Subjt:  KHGNSRLAERVAVRL

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-4338.43Show/hide
Query:  SEQAMTIFSEMQWETAP-SKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR
        S +A+ +F +M+ E    ++ +F++ L  CA+  ALE GKQ+HG +V+  YE    V  AL+ MYCKC  +E A  +F+  A +D++ WN++I G   + 
Subjt:  SEQAMTIFSEMQWETAP-SKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNR

Query:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC
         G + +  F   M  EG+KPD  T   +L AC +  LV+ GRQYF +M+  + ++P  +HY CM++L GR G +++  N + NMPF+P A +   +L A 
Subjt:  RGMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDAC

Query:  RKHGNSRLAERVAVRL
        R HGN+ LAE  A ++
Subjt:  RKHGNSRLAERVAVRL

AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein5.9e-4137.73Show/hide
Query:  QAMTIFSEMQWETA--PSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR
        + + +F++M  ++   P  FT  ++L ACA+  +L QG+ +H ++ ++  EI+  ++ ALVDMY KC +++ AL+VF   + RDV  WNSII     +  
Subjt:  QAMTIFSEMQWETA--PSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRR

Query:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR
        G   +E+F   M+ EG KP+ +TF G+L AC +  +++  R+ F+ MS  + + P +EHY CM++L GR G ++E E  +N +P D  + +LE +L AC+
Subjt:  GMIVIELFRLMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACR

Query:  KHGNSRLAERVAVRLNEQNL
        + G    AER+A RL E NL
Subjt:  KHGNSRLAERVAVRLNEQNL

AT5G09950.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.6e-4142.63Show/hide
Query:  FTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRRGMIVIELFRLMMMEEGIKP
        F +AT+L A A+   LE+G ++H   VR   E D+VV  ALVDMY KC +L+YAL+ F     R+   WNS+I G   + +G   ++LF  M ++    P
Subjt:  FTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRRGMIVIELFRLMMMEEGIKP

Query:  DHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACRKHGNSRLAE
        DHVTF G+L AC +  L+E G ++F+SMSD + + PR+EH+ CM ++ GR G +D+LE+FI  MP  P   +   +L AC +  N R AE
Subjt:  DHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACRKHGNSRLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAACAGGCCATGACAATTTTCTCAGAGATGCAATGGGAAACAGCTCCTAGTAAATTCACCTTTGCAACTCTTCTAGGAGCCTGTGCAAACACTTTTGCACTAGA
GCAAGGCAAACAAATCCATGGCTTCATGGTTAGAAATAATTATGAGATAGACATTGTAGTTAGCGGAGCTTTAGTCGACATGTACTGCAAATGCCGCCAACTTGAGTATG
CTCTCAAGGTTTTTGAAAATGCGGCTTCTCGCGATGTGATTTTGTGGAACTCCATAATTTTAGGATGTTGCCACAACAGAAGGGGCATGATAGTAATTGAATTGTTTCGA
TTGATGATGATGGAAGAAGGAATTAAACCGGACCATGTGACCTTCCAAGGTATTTTGCTTGCTTGTGTATATGAAAATCTCGTTGAGTTGGGTAGGCAGTATTTCGATTC
AATGAGTGATAAGTTCTGCATCATACCTCGATTGGAGCACTATGAATGCATGATCGAGCTCTATGGCCGACATGGAAACATGGATGAGCTCGAAAATTTTATCAACAATA
TGCCCTTTGATCCCACTGCCCCAATGTTAGAAAGAATCCTCGATGCATGCAGAAAACACGGAAACTCGAGGTTGGCAGAAAGGGTAGCTGTACGACTTAATGAGCAGAAT
CTTTCAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAACAGGCCATGACAATTTTCTCAGAGATGCAATGGGAAACAGCTCCTAGTAAATTCACCTTTGCAACTCTTCTAGGAGCCTGTGCAAACACTTTTGCACTAGA
GCAAGGCAAACAAATCCATGGCTTCATGGTTAGAAATAATTATGAGATAGACATTGTAGTTAGCGGAGCTTTAGTCGACATGTACTGCAAATGCCGCCAACTTGAGTATG
CTCTCAAGGTTTTTGAAAATGCGGCTTCTCGCGATGTGATTTTGTGGAACTCCATAATTTTAGGATGTTGCCACAACAGAAGGGGCATGATAGTAATTGAATTGTTTCGA
TTGATGATGATGGAAGAAGGAATTAAACCGGACCATGTGACCTTCCAAGGTATTTTGCTTGCTTGTGTATATGAAAATCTCGTTGAGTTGGGTAGGCAGTATTTCGATTC
AATGAGTGATAAGTTCTGCATCATACCTCGATTGGAGCACTATGAATGCATGATCGAGCTCTATGGCCGACATGGAAACATGGATGAGCTCGAAAATTTTATCAACAATA
TGCCCTTTGATCCCACTGCCCCAATGTTAGAAAGAATCCTCGATGCATGCAGAAAACACGGAAACTCGAGGTTGGCAGAAAGGGTAGCTGTACGACTTAATGAGCAGAAT
CTTTCAATGTGA
Protein sequenceShow/hide protein sequence
MSEQAMTIFSEMQWETAPSKFTFATLLGACANTFALEQGKQIHGFMVRNNYEIDIVVSGALVDMYCKCRQLEYALKVFENAASRDVILWNSIILGCCHNRRGMIVIELFR
LMMMEEGIKPDHVTFQGILLACVYENLVELGRQYFDSMSDKFCIIPRLEHYECMIELYGRHGNMDELENFINNMPFDPTAPMLERILDACRKHGNSRLAERVAVRLNEQN
LSM