; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g013300 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g013300
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationChr09:14804707..14805426
RNA-Seq ExpressionLcy09g013300
SyntenyLcy09g013300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]9.1e-5850.52Show/hide
Query:  LQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFK
        +QGWK +FFS+GGKE+ IKSV QAIP Y MS FRLPK  C+++  M ARFWWGS++  +K+HW  WE +C PKE+GGLNFRDL   N+ L+AKQVWR+ +
Subjt:  LQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFK

Query:  NPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIHISGTSGRELISVSEFITPS
        NPN+L ++V+  KY   + +L A   +N S FW+GF+W RD++  GLR R+GNG + + F DPW+P   +F+P  I+   G   + V++ I P+
Subjt:  NPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIHISGTSGRELISVSEFITPS

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.5e-6051.17Show/hide
Query:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR
        + NIL + +V    +YLG+P+   RNRR  F YIK RVW+ LQGWK   FSIGGKE+ IK+VAQAIP Y MSCFRLPK L  + H + ARFWWGS+   +
Subjt:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR

Query:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF
        KIHW  W +L  PK  GG+ FRDL   NK LLAKQ WR+  +PN + ++V+ G+Y +  S ++A I  N S  WR  +W RD+++ GLR RIGNG S   
Subjt:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF

Query:  FKDPWLPEEVTFK
        + D W+P + T K
Subjt:  FKDPWLPEEVTFK

XP_030477990.1 uncharacterized protein LOC115695032 [Cannabis sativa]1.3e-5643.1Show/hide
Query:  NILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKI
        NILGMPI      YLG+P+   R++++ F  IK+R+W+ L  W    FS+GGKE+ +K+V Q+IPTY MSCF+LP   C +I S+M+ FWWGST  K+KI
Subjt:  NILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKI

Query:  HWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFK
        HWK+W+ LC+ K  GGL F++    N+ LLAKQ WRLF+NP  L  +V+ G+Y  +   L A      S+ W+G  W R++++ G+R ++GNG       
Subjt:  HWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFK

Query:  DPWLPEEVTFKPIHISGTSGRELISVSEFITP
        DPW+P      P+  +G       +V+++ITP
Subjt:  DPWLPEEVTFKPIHISGTSGRELISVSEFITP

XP_030483769.1 uncharacterized protein LOC115700339 [Cannabis sativa]9.1e-5844.16Show/hide
Query:  ILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIH
        ILGMPI      YLG+P+   R++ + F++IK+++W+ +  W    FSIGGKE+ +K+V Q+IPTY MSCFRL K  C+++ +MMARFWWGS    +KIH
Subjt:  ILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIH

Query:  WKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKD
        WKKW+ LC+ K  GG+ FR     N+ LLAKQ WR+F+ PN L ++V+ G+Y   +  + A     CS+ W+G VW R+++  GLR ++G+G S     D
Subjt:  WKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKD

Query:  PWLPEEVTFKPIHISGTSGRELISVSEFITP
         W+P    FK     G S      VS++ITP
Subjt:  PWLPEEVTFKPIHISGTSGRELISVSEFITP

XP_030496634.1 uncharacterized protein LOC115712492 [Cannabis sativa]7.7e-5744.1Show/hide
Query:  LGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHW
        LGMPI     +YLG+P+   R+++E F+ +K+R+WQ L  W    FS+GGKE+ +K+V Q+IPTY MSCFRLP T C  + SMMA FWWGST    KIHW
Subjt:  LGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHW

Query:  KKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDP
        + W+ LC+ K  GG+ FR     NK LLAKQ WR+ + PN L ++++  +Y    + L+A +  + S+ W+G  W R+++  GLR +IGNG +     D 
Subjt:  KKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDP

Query:  WLPEEVTFKPIHISGTSGRELISVSEFIT
        W+P    FKP+  +G    + ++VS FIT
Subjt:  WLPEEVTFKPIHISGTSGRELISVSEFIT

TrEMBL top hitse value%identityAlignment
A0A803NHG3 Uncharacterized protein5.0e-6251.63Show/hide
Query:  MTLANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDA
        + LA  LG+ +V N GKYLG+ S   RN+++ F  IK RVW  L+GWKG+ FS+G KE+ IK++ QAIP Y MSC+RL K+    IH M ARFWWGST  
Subjt:  MTLANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDA

Query:  KRKIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRST
        K+KIHW KWE LCRPKE GGL FRDL   N+ LLAKQ+WR  + P  L +KV+   Y    S+L A    + S  WR  VW ++II  G R R+GNG+  
Subjt:  KRKIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRST

Query:  DFFKDPWLPEEVTFK
           +DPWLP   +FK
Subjt:  DFFKDPWLPEEVTFK

A0A803PM68 Uncharacterized protein7.5e-6653.99Show/hide
Query:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR
        LA ++G+ +V N GKYLG+PS   R +++ F +IK +VW  L+GWKG+FFS  GKEI IK++ QAIPTY MSCFRLPK   + IHSM ARFWWGS++   
Subjt:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR

Query:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF
        KIHW KW  LC+ KE GGL FRDL   N+ LLAKQ+WR  + PN L +KV+   Y     +L+A    + S  WR  VW + IIQ G R RIGNG S   
Subjt:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF

Query:  FKDPWLPEEVTFK
         +DPWLP  VTFK
Subjt:  FKDPWLPEEVTFK

A0A803PV25 Uncharacterized protein9.1e-6453.05Show/hide
Query:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR
        LA  +G+ +V N GKYLG+PS   R +++ F +I  +VW  L+GWKG+FFS  GKE+ IK++ QAIPTY MSCFRLPK   + IHSM ARFWWGS++   
Subjt:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR

Query:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF
        KIHW KW  LC+ KE GGL FRDL   N+ LLAKQ+WR  + PN L +KV+   Y     +L+A    + S  WR  VW + IIQ G R RIGNG S   
Subjt:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF

Query:  FKDPWLPEEVTFK
          DPWLP  VTFK
Subjt:  FKDPWLPEEVTFK

A0A803PWX1 Uncharacterized protein3.3e-6654.46Show/hide
Query:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR
        LANI+G+ +V N GKYLG+PS   R +++ F +IK +VW  L+GWKG+FFS  GKE+ IK+V QAIPTY MSCFRLPK   + IHSM ARFWWGS++   
Subjt:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR

Query:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF
        KIHW KW+ LC+ KE GGL FRDL   N+ LLAKQVWR  + PN L ++V+   Y     +++A    + S  WR  VW + IIQ G R RIGNG S   
Subjt:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF

Query:  FKDPWLPEEVTFK
          DPWLP  VTFK
Subjt:  FKDPWLPEEVTFK

A0A803Q154 Uncharacterized protein1.7e-6250.47Show/hide
Query:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR
        LA +L + +V+N GKYLG+PS F R+++E F  IK RVWQ ++GWKG+ FS+ GKE+ IK++ QA+P Y MSCF+LPK+    +HSM ARFWWGS+  ++
Subjt:  LANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKR

Query:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF
        K+HW KW  +C+PKE GGL FRDL   N+ LLAKQVWR  ++P LLS++V+   Y    S+LDA    + S  WR  +W + ++  G R RIG+G     
Subjt:  KIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDF

Query:  FKDPWLPEEVTF
          DPWLP  VTF
Subjt:  FKDPWLPEEVTF

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003105.7e-3139.22Show/hide
Query:  AIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKE-MGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLD
        A+P Y MSCFRL K LC  + S M  FWW S + KRKI W  W+ LC+ KE  GGL FRDL   N+ LLAKQ +R+   P+ L ++++  +Y   +S+++
Subjt:  AIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKE-MGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLD

Query:  APIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIH
          +    S  WR  +  R+++  GL   IG+G  T  + D W+ +E    P++
Subjt:  APIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIH

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.6e-3134.5Show/hide
Query:  AIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDA
        A+PTY M+CF LPKT+C  I S++A FWW +    + +HWK W+ L   K  GG+ F+D+   N  LL KQ+WR+   P  L AKV   +Y  ++  L+A
Subjt:  AIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDA

Query:  PIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIHISGTSGRELISVSEFITPS
        P+    S  W+    +++I++ G R  +GNG     ++  WL  +     + +     +E  SVS  +  S
Subjt:  PIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIHISGTSGRELISVSEFITPS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.1e-3239.22Show/hide
Query:  AIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKE-MGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLD
        A+P Y MSCFRL K LC  + S M  FWW S + KRKI W  W+ LC+ KE  GGL FRDL   N+ LLAKQ +R+   P+ L ++++  +Y   +S+++
Subjt:  AIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIHWKKWEALCRPKE-MGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLD

Query:  APIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIH
          +    S  WR  +  R+++  GL   IG+G  T  + D W+ +E    P++
Subjt:  APIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPEEVTFKPIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTAGCAAATATTTTAGGAATGCCTATTGTGTCCAATCTTGGAAAATATTTGGGTGTTCCTTCTTGTTTTACCAGGAACAGACGGGAGGATTTCACGTAT
ATAAAACAGCGAGTTTGGCAAACGTTACAGGGGTGGAAAGGAAATTTTTTCTCCATTGGGGGAAAGGAAATTCCTATTAAAAGTGTAGCTCAGGCCATTCCAACA
TATATTATGAGTTGTTTCCGTCTGCCAAAAACTCTATGTGATGATATACATAGTATGATGGCTCGTTTCTGGTGGGGCTCTACTGATGCAAAACGGAAAATCCAT
TGGAAGAAATGGGAGGCATTGTGTCGGCCTAAGGAAATGGGAGGTTTGAACTTTCGAGATCTGGCAACCCTTAATAAAGTTTTATTAGCTAAACAGGTATGGAGA
TTATTCAAAAATCCAAATCTGTTGTCTGCCAAAGTTATTCTAGGAAAGTACGCTCGTCAGACCTCCCTTTTAGATGCTCCTATCAAGCAAAATTGTTCTGTTTTC
TGGCGTGGGTTTGTATGGGCTCGTGACATTATTCAAATGGGGTTGCGCGAAAGGATTGGTAATGGTAGATCTACTGATTTTTTCAAGGATCCTTGGTTGCCAGAG
GAGGTTACTTTCAAGCCTATTCATATTTCAGGCACGTCTGGTAGGGAGTTGATTTCTGTTTCGGAGTTTATTACTCCATCTGTTGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTTAGCAAATATTTTAGGAATGCCTATTGTGTCCAATCTTGGAAAATATTTGGGTGTTCCTTCTTGTTTTACCAGGAACAGACGGGAGGATTTCACGTAT
ATAAAACAGCGAGTTTGGCAAACGTTACAGGGGTGGAAAGGAAATTTTTTCTCCATTGGGGGAAAGGAAATTCCTATTAAAAGTGTAGCTCAGGCCATTCCAACA
TATATTATGAGTTGTTTCCGTCTGCCAAAAACTCTATGTGATGATATACATAGTATGATGGCTCGTTTCTGGTGGGGCTCTACTGATGCAAAACGGAAAATCCAT
TGGAAGAAATGGGAGGCATTGTGTCGGCCTAAGGAAATGGGAGGTTTGAACTTTCGAGATCTGGCAACCCTTAATAAAGTTTTATTAGCTAAACAGGTATGGAGA
TTATTCAAAAATCCAAATCTGTTGTCTGCCAAAGTTATTCTAGGAAAGTACGCTCGTCAGACCTCCCTTTTAGATGCTCCTATCAAGCAAAATTGTTCTGTTTTC
TGGCGTGGGTTTGTATGGGCTCGTGACATTATTCAAATGGGGTTGCGCGAAAGGATTGGTAATGGTAGATCTACTGATTTTTTCAAGGATCCTTGGTTGCCAGAG
GAGGTTACTTTCAAGCCTATTCATATTTCAGGCACGTCTGGTAGGGAGTTGATTTCTGTTTCGGAGTTTATTACTCCATCTGTTGGGTAG
Protein sequenceShow/hide protein sequence
MTLANILGMPIVSNLGKYLGVPSCFTRNRREDFTYIKQRVWQTLQGWKGNFFSIGGKEIPIKSVAQAIPTYIMSCFRLPKTLCDDIHSMMARFWWGSTDAKRKIH
WKKWEALCRPKEMGGLNFRDLATLNKVLLAKQVWRLFKNPNLLSAKVILGKYARQTSLLDAPIKQNCSVFWRGFVWARDIIQMGLRERIGNGRSTDFFKDPWLPE
EVTFKPIHISGTSGRELISVSEFITPSVG