CuGenDBv2

Gene ID	Lcy09g013670
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	Chr09:15274700..15289914
RNA-Seq Expression	Lcy09g013670
Synteny	Lcy09g013670
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-160

97.61

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD TAVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+L HLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

KAG7016636.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-160

97.61

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD TAVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+L HLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022157893.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia]

2.7e-160

97.27

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDD TAVPRTHIDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANIL HLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022939256.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata]

1.6e-160

97.61

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD TAVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+L HLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

1.3e-159

97.27

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD TAVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+L HLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

1.1e-159

97.6

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELED+ TAVPRTHIDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANIL HLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

1.1e-159

97.6

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELED+ TAVPRTHIDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANIL HLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A6J1DUL2 U3 small nucleolar ribonucleoprotein protein IMP4

1.3e-160

97.27

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDD TAVPRTHIDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANIL HLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

7.5e-161

97.61

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD TAVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+L HLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

6.4e-160

97.27

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD TAVPRTHIDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+L HLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

1.3e-88

56.85

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  ER   E+K K+R ALEE + IPTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GT  EA PH+I++ F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL +LFPVPK D++RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

1.6e-88

56.51

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL +LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

2.8e-88

56.51

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL +LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

1.6e-88

56.51

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL +LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

2.8e-88

56.51

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE + IPTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL +LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

8.6e-133

76.87

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR +RL++EY+YRKSLEG ER +YE+KR IREAL+EGKPIPTELRN EA LR+EI+LED  TAVPR+HIDDEYANA+E DPKIL+TTSR+PSAPL +F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
         KELK VFPN+QR+NRG QVISEIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G MPE YPH+I NNFTT++G+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        R  NIL H+FP PK D KR+VTF+NQSDYISFR+H+Y+K  GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKRKF+G+
Subjt:  RTANILMHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

AT4G01560.1 Ribosomal RNA processing Brix domain protein

1.4e-37

36.16

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Query:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEG-----KPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAP
        +R  +Y K    K+    EK++KIR        ALE G     K IP  + N   +       +D+         +       EI PK+L+TT R  S  
Subjt:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEG-----KPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAP

Query:  LTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTT
              EL  V PN+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +IK+    G      P ++LNNFTT
Subjt:  LTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTT

Query:  KLGERTANILMHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKT
        +LG R       LFP P P+   +RVVTF NQ D+I FRHH Y           G  ++I+  L+E GPRF L+L  ++ GT D    + EWV +P M T
Subjt:  KLGERTANILMHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKT

Query:  TKKRKFL
        +++R FL
Subjt:  TKKRKFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTGCGAAGAAACATTCGACTGAGGAGGGAGTATTTGTACCGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTCTATGAGAAGAAGCGGAAGATTAGAGAAGCCCTCGA
AGAGGGAAAACCTATTCCTACTGAACTCAGGAATGAGGAAGCGGCACTTCGTAAAGAAATTGAACTCGAGGATGATCGCACGGCAGTCCCAAGGACACACATTGATGATG
AGTATGCAAATGCTTCAGAAATTGATCCTAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTTTTTCCGAAT
GCACAACGAATGAATCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGCCGTGCTCACGAATTTACAGATGTCATTTTAGTTCATGAACATCGTGGTGTGCCAGA
TGGTTTAATTATCAGCCATCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCAGGCATGAAATTAAGGACAAAAAAGCTATGGGAACGATGCCTG
AGGCCTACCCGCACATAATTTTGAATAATTTTACCACGAAGTTGGGTGAAAGGACGGCCAACATCTTAATGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTG
GTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCTAAATCAATTGAGCTGAAGGAGATTGGTCCTCGGTTTGAATT
GCGACTGTATCAGATAAAGTTAGGAACTGTTGATCAAACGGAAGCACAGAATGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCAAGTTCCTTGGTGATT
GA

mRNA sequence

Show/hide mRNA sequence

CATCTTCGCCTTAAGCGATCCGCCGGCCGCAGTGCATCTCCCCTCCTCTGATTATCTTCTCCAGCGAGCACAGGACCCACGGCGGCGTTGGTGTAGTAGCAGTTCGCAGA
GGGCATTTTTTCCGACTGTTTTGCAGCGTTTTTAGTGCAGTGGGTCGTGAACAACCTGTCTGTGCGGCGTGGGTCTTTGTTCGTGGGTGTTTTCCAGCGAGATCTGGCGG
CCAGCAGCTCCTAGTGTCGCCACCGTCGTTGTCGCCGCCACTCTCCGGTTCAGAGCCGCCGTCGCTGTCTTTCTTTCGCTCGTGCCTCCGCATCCTGCCGCTAGCTGTTT
GCACTGATTTTCTACTTTCTTGTTGGCACTGACTCTAGGTGGGGGTTTGACGAATAAACCAAAGCAATGTTGCGAAGAAACATTCGACTGAGGAGGGAGTATTTGTACCG
AAAGAGTTTAGAAGGCAAGGAGCGTTTGCTCTATGAGAAGAAGCGGAAGATTAGAGAAGCCCTCGAAGAGGGAAAACCTATTCCTACTGAACTCAGGAATGAGGAAGCGG
CACTTCGTAAAGAAATTGAACTCGAGGATGATCGCACGGCAGTCCCAAGGACACACATTGATGATGAGTATGCAAATGCTTCAGAAATTGATCCTAAAATTTTGATAACT
ACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTTTTTCCGAATGCACAACGAATGAATCGTGGTGGTCAGGTGATCTCAGAGATTAT
AGAGACCTGCCGTGCTCACGAATTTACAGATGTCATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTATCAGCCATCTTCCTTTTGGTCCAACTGCATATT
TTGGATTGTTGAATGTGGTTACCAGGCATGAAATTAAGGACAAAAAAGCTATGGGAACGATGCCTGAGGCCTACCCGCACATAATTTTGAATAATTTTACCACGAAGTTG
GGTGAAAGGACGGCCAACATCTTAATGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTGGTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCA
TATTTATGAGAAGCATGGAGGTGCTAAATCAATTGAGCTGAAGGAGATTGGTCCTCGGTTTGAATTGCGACTGTATCAGATAAAGTTAGGAACTGTTGATCAAACGGAAG
CACAGAATGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCAAGTTCCTTGGTGATTGAGAAATGGCAAAAGAAGCAGATTTTGTATTCTATATATATATT
CTTTTTAAATTTCTTTGCATAATCACATTTTTATTAAAGATTAAATTTTGTTCGGTTGGGGATACCGAATTTTCTCTAGATTATTGATAGATTTAGTTCAGTCTTGATAT
TAGTTGTTTTGTTACTGACATGATTGTACAAGTTTGAAAGAGAAGTGCAATTGGCAAGGGGTTGAATA

Protein sequence

Show/hide protein sequence

MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDRTAVPRTHIDDEYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPN
AQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILMHLFPVPKPDTKRV
VTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

Lcy09g013670 (gene) of Sponge gourd (P93075) v1 genome