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Lcy09g014090 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g014090
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotodermal factor 1-like
Genome locationChr09:15781093..15781476
RNA-Seq ExpressionLcy09g014090
SyntenyLcy09g014090
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647347.1 hypothetical protein Csa_003649 [Cucumis sativus]3.7e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

XP_011657562.2 protodermal factor 1 isoform X1 [Cucumis sativus]3.7e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

XP_016900774.1 PREDICTED: protodermal factor 1-like isoform X1 [Cucumis melo]4.9e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

XP_016900775.1 PREDICTED: protodermal factor 1-like isoform X2 [Cucumis melo]4.9e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

XP_031743089.1 protodermal factor 1 isoform X2 [Cucumis sativus]3.7e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

TrEMBL top hitse value%identityAlignment
A0A0A0KGQ1 Uncharacterized protein1.8e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

A0A151U278 Uncharacterized protein C1orf170 isogeny family3.4e-1758.62Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSS
        PG+IWG  G WGTLG+AFG  N PG GA+LSLPQALSNTR D L  LYREG A+ +NS+VNNRFP    +Q    FVA   ++K ++
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSS

A0A1S4DXR0 protodermal factor 1-like isoform X12.4e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

A0A1S4DYH9 protodermal factor 1-like isoform X22.4e-1876.92Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSNTR D L  LYREGAAA +NSMVNNR+P
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFP

A0A6J1D1H1 protodermal factor 1-like2.0e-1754.46Show/hide
Query:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSSWTKTHNKFSQNSH
        PG+IWG  G WGT+G+AFGI NAPG GATLSLPQALSN+R D L  LYREGAA+ +NSMVNNRFP     Q    FV+   + K ++      K +    
Subjt:  PGLIWG-WGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSSWTKTHNKFSQNSH

Query:  F
        F
Subjt:  F

SwissProt top hitse value%identityAlignment
Q9S728 Protodermal factor 16.0e-1146.15Show/hide
Query:  PGLIWG-WGGWGTLGNAFGI----KNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSS
        P LIWG  G WGT+G AFG      + PG    ++L QALSNTR D +  LYREG A+ +NSMVN++FP     Q    FVA   + K ++
Subjt:  PGLIWG-WGGWGTLGNAFGI----KNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSS

Arabidopsis top hitse value%identityAlignment
AT2G42840.1 protodermal factor 14.3e-1246.15Show/hide
Query:  PGLIWG-WGGWGTLGNAFGI----KNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSS
        P LIWG  G WGT+G AFG      + PG    ++L QALSNTR D +  LYREG A+ +NSMVN++FP     Q    FVA   + K ++
Subjt:  PGLIWG-WGGWGTLGNAFGI----KNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCCAGGACTAATATGGGGGTGGGGTGGTTGGGGAACACTGGGCAATGCTTTTGGCATAAAAAACGCTCCAGGTGTTGGAGCTACTCTCAGCTTACCACAAGCACT
CTCAAATACACGAATTGATGACCTTCAAGAACTTTATCGAGAAGGAGCTGCGGCTGTTATGAACTCCATGGTGAACAACAGGTTCCCTTTACTTGACAAGAGGCAATTCT
CATTTGAATTTGTTGCAGATTTCATTAATGAAAAGATGTCTTCATGGACAAAAACACACAACAAATTCAGCCAAAATTCACACTTTCCCAAAAAACATGAAGGTTCGGAG
AAGGACTTATCGAACGGTGACGGGCGAGTGAATAGGAGGAGGATGATAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCCAGGACTAATATGGGGGTGGGGTGGTTGGGGAACACTGGGCAATGCTTTTGGCATAAAAAACGCTCCAGGTGTTGGAGCTACTCTCAGCTTACCACAAGCACT
CTCAAATACACGAATTGATGACCTTCAAGAACTTTATCGAGAAGGAGCTGCGGCTGTTATGAACTCCATGGTGAACAACAGGTTCCCTTTACTTGACAAGAGGCAATTCT
CATTTGAATTTGTTGCAGATTTCATTAATGAAAAGATGTCTTCATGGACAAAAACACACAACAAATTCAGCCAAAATTCACACTTTCCCAAAAAACATGAAGGTTCGGAG
AAGGACTTATCGAACGGTGACGGGCGAGTGAATAGGAGGAGGATGATAGGGTGA
Protein sequenceShow/hide protein sequence
MFPGLIWGWGGWGTLGNAFGIKNAPGVGATLSLPQALSNTRIDDLQELYREGAAAVMNSMVNNRFPLLDKRQFSFEFVADFINEKMSSWTKTHNKFSQNSHFPKKHEGSE
KDLSNGDGRVNRRRMIG