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Lcy09g014110 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g014110
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr09:15795990..15799031
RNA-Seq ExpressionLcy09g014110
SyntenyLcy09g014110
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0755499.1 hypothetical protein [Gossypium gossypioides]8.1e-1630.1Show/hide
Query:  KVWERLD----RYLCN-PEFESLIKDVKASNLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSN
        +VW +LD      L N  E+ S +    A N  W     LIA + WAIW  RNKF H  ++        +I  +  +Y+++           L+     +
Subjt:  KVWERLD----RYLCN-PEFESLIKDVKASNLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSN

Query:  PVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKKNRE
         V+W PPP  + K+NVDA  S          ++R+D+G + G+     +  L   +AE  A+L G++ A+ MGF ++++ESD  LV+N I+K + +
Subjt:  PVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKKNRE

XP_006471930.1 uncharacterized protein LOC102617744 [Citrus sinensis]1.5e-1434.42Show/hide
Query:  DLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDD
        + EL+   CWAIW  RNK     +     +        LE YQ    +K   +   +      +  RW PPP+N LKLNVDAA +S     G+  VLRD 
Subjt:  DLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDD

Query:  KGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLI
         GRV  A      F  D + AE  AI  G+++A       ++VE+DC  V  L+
Subjt:  KGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLI

XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]1.6e-1635.9Show/hide
Query:  ELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNP---VRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRD
        +L A T WAIW DRN   H   +    +R  WI  Y + Y  A   K      R+  + +S P    RW PP  + +K+N DAA  S   STG+  ++RD
Subjt:  ELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNP---VRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRD

Query:  DKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIK
          G +  A +  L   L+   AE+R ILE ++LA S  + +++VESDC   I L++
Subjt:  DKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.4e-1734.59Show/hide
Query:  DLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPV--RWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLR
        DL L A T W IW DRN   H +++ P   + +W+  +L+ +  A            +T+ N  PV   W P  S  LKLN DAA      ST   C++R
Subjt:  DLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPV--RWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLR

Query:  DDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK
        D    +  A++  + F L   +AE+R ILEG++ A +  F  + VESD +L I LI+ +
Subjt:  DDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK

XP_023880097.1 uncharacterized protein LOC111992470 [Quercus suber]5.3e-1527.52Show/hide
Query:  EFRNAIDDCELRAINPVGEQVTWYDTREGIKVWERLDRYLCNPEFESLIKDVKAS--NLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRD
        EF +  D+ +++AI     +V W DT+  + V     R     EF  ++ ++  +  ++DW+      A T W++W +RN  T   +   +    K  R+
Subjt:  EFRNAIDDCELRAINPVGEQVTWYDTREGIKVWERLDRYLCNPEFESLIKDVKAS--NLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRD

Query:  YLEKYQNANWKKVEAIDRRLQTKLNSNPVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMG
        Y E+ ++    ++ +    L          W PP + + K+N D A  S   S GI  V+R+++G + G+ +  +D  L     E RA+ EG+RLA  +G
Subjt:  YLEKYQNANWKKVEAIDRRLQTKLNSNPVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMG

Query:  FGKILVESDCMLVINLIK
          KI++ESD + V+N ++
Subjt:  FGKILVESDCMLVINLIK

TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047867.9e-1735.9Show/hide
Query:  ELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNP---VRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRD
        +L A T WAIW DRN   H   +    +R  WI  Y + Y  A   K      R+  + +S P    RW PP  + +K+N DAA  S   STG+  ++RD
Subjt:  ELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNP---VRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRD

Query:  DKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIK
          G +  A +  L   L+   AE+R ILE ++LA S  + +++VESDC   I L++
Subjt:  DKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIK

A0A6J1DX30 uncharacterized protein LOC1110248743.6e-1734.59Show/hide
Query:  DLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPV--RWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLR
        DL L A T W IW DRN   H +++ P   + +W+  +L+ +  A            +T+ N  PV   W P  S  LKLN DAA      ST   C++R
Subjt:  DLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPV--RWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLR

Query:  DDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK
        D    +  A++  + F L   +AE+R ILEG++ A +  F  + VESD +L I LI+ +
Subjt:  DDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK

A0A7J9D462 Uncharacterized protein3.9e-1630.1Show/hide
Query:  KVWERLD----RYLCN-PEFESLIKDVKASNLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSN
        +VW +LD      L N  E+ S +    A N  W     LIA + WAIW  RNKF H  ++        +I  +  +Y+++           L+     +
Subjt:  KVWERLD----RYLCN-PEFESLIKDVKASNLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSN

Query:  PVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKKNRE
         V+W PPP  + K+NVDA  S          ++R+D+G + G+     +  L   +AE  A+L G++ A+ MGF ++++ESD  LV+N I+K + +
Subjt:  PVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKKNRE

A0A7N2RE64 RNase H domain-containing protein3.7e-1431.06Show/hide
Query:  MGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPVR--WHPPPSNFLKLNVDAAWSSLPPSTGIRCV
        M D+ L+ TT W IW +RN+  H +   P ++   W ++ LE +  AN            T+   +PV   W PP  ++ K N + A  +    TGI  V
Subjt:  MGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPVR--WHPPPSNFLKLNVDAAWSSLPPSTGIRCV

Query:  LRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK
        +RD  G V  A +  +   L     E +A+ EG+R A  MG    L ESD + V+N ++++
Subjt:  LRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK

A0A803QHU3 Uncharacterized protein4.4e-1528.64Show/hide
Query:  YDTREGIKVWERLDRYLCNPEFESLIKD---VKASNLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRL--
        +  R    VW++++ +       S+ K    V  S +    ++ELI  T W+IWM+RN+  H  +  P  +   +  +YL  Y+ A   K    D  +  
Subjt:  YDTREGIKVWERLDRYLCNPEFESLIKD---VKASNLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRL--

Query:  QTKLNSNPVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK
        Q +       W PP +  LKLNVDAA  +    TGI  V+RD  G VR A A  +  +      E +AI   +   + +     +VE+D +LV N I+  
Subjt:  QTKLNSNPVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK

Query:  NREVGS
        +  + S
Subjt:  NREVGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-0926.44Show/hide
Query:  SNLDWMGDLE-----------LIATTCWAIWMDRNK--FTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPVRWHPPPSNFLKLNV
        +NL W+ +LE           L+    W +W  RN+  F   E   P  +R + + D+ E++      + +A   +++  L+   V+W  PP  ++K N 
Subjt:  SNLDWMGDLE-----------LIATTCWAIWMDRNK--FTHNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLNSNPVRWHPPPSNFLKLNV

Query:  DAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLI
        DA W    P  GI  +LR++ G V    A  L    +   AEL A+   +       + +I+ ESD   ++NL+
Subjt:  DAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLI

AT4G29090.1 Ribonuclease H-like superfamily protein2.1e-0926.54Show/hide
Query:  NLDWMGDLELIATTCWAIWMDRNKFT-HNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLN-SNPVRWHPPPSNFLKLNVDAAWSSLPPSTG
        N  W    +L+    W +W +RN+      E   + +  +   D LE+++     + EA     + ++N S+  RW PPP  ++K N DA W+      G
Subjt:  NLDWMGDLELIATTCWAIWMDRNKFT-HNEEIPPRNIRGKWIRDYLEKYQNANWKKVEAIDRRLQTKLN-SNPVRWHPPPSNFLKLNVDAAWSSLPPSTG

Query:  IRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLI
        I  VLR++KG V+   A  L        AEL A+   +       +  ++ ESD  ++I ++
Subjt:  IRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATTTAGAAATGCTATTGATGACTGTGAGCTAAGAGCTATTAATCCGGTGGGAGAACAAGTCACATGGTACGACACTAGAGAAGGGATCAAAGTTTGGGAGAG
ATTAGACAGATATCTCTGCAATCCAGAATTTGAATCTCTTATAAAAGATGTGAAGGCTTCTAATCTCGACTGGATGGGTGACCTAGAATTGATAGCTACTACATGTTGGG
CGATATGGATGGATAGGAACAAATTCACTCACAACGAAGAAATTCCCCCACGTAATATAAGGGGCAAATGGATAAGGGACTACCTGGAAAAGTATCAGAATGCAAACTGG
AAGAAGGTCGAAGCAATTGATAGAAGGTTGCAAACAAAGCTGAACTCAAATCCTGTCCGGTGGCATCCGCCGCCAAGTAATTTCTTAAAATTGAATGTAGATGCAGCGTG
GAGCTCTTTACCCCCATCAACAGGAATCAGATGTGTATTAAGGGATGATAAGGGTCGTGTGAGGGGAGCATCTGCTTCTCACCTGGATTTTGACCTGGATGGAACAATGG
CGGAGTTGAGAGCGATCCTCGAAGGAATTCGCTTGGCGATTTCTATGGGGTTTGGCAAAATTTTGGTGGAGTCAGATTGCATGTTAGTGATAAATCTAATTAAAAAAAAA
AATAGAGAAGTGGGGTCAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATTTAGAAATGCTATTGATGACTGTGAGCTAAGAGCTATTAATCCGGTGGGAGAACAAGTCACATGGTACGACACTAGAGAAGGGATCAAAGTTTGGGAGAG
ATTAGACAGATATCTCTGCAATCCAGAATTTGAATCTCTTATAAAAGATGTGAAGGCTTCTAATCTCGACTGGATGGGTGACCTAGAATTGATAGCTACTACATGTTGGG
CGATATGGATGGATAGGAACAAATTCACTCACAACGAAGAAATTCCCCCACGTAATATAAGGGGCAAATGGATAAGGGACTACCTGGAAAAGTATCAGAATGCAAACTGG
AAGAAGGTCGAAGCAATTGATAGAAGGTTGCAAACAAAGCTGAACTCAAATCCTGTCCGGTGGCATCCGCCGCCAAGTAATTTCTTAAAATTGAATGTAGATGCAGCGTG
GAGCTCTTTACCCCCATCAACAGGAATCAGATGTGTATTAAGGGATGATAAGGGTCGTGTGAGGGGAGCATCTGCTTCTCACCTGGATTTTGACCTGGATGGAACAATGG
CGGAGTTGAGAGCGATCCTCGAAGGAATTCGCTTGGCGATTTCTATGGGGTTTGGCAAAATTTTGGTGGAGTCAGATTGCATGTTAGTGATAAATCTAATTAAAAAAAAA
AATAGAGAAGTGGGGTCAGGTTGA
Protein sequenceShow/hide protein sequence
MEEFRNAIDDCELRAINPVGEQVTWYDTREGIKVWERLDRYLCNPEFESLIKDVKASNLDWMGDLELIATTCWAIWMDRNKFTHNEEIPPRNIRGKWIRDYLEKYQNANW
KKVEAIDRRLQTKLNSNPVRWHPPPSNFLKLNVDAAWSSLPPSTGIRCVLRDDKGRVRGASASHLDFDLDGTMAELRAILEGIRLAISMGFGKILVESDCMLVINLIKKK
NREVGSG