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Lcy09g014380 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g014380
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr09:16663976..16667425
RNA-Seq ExpressionLcy09g014380
SyntenyLcy09g014380
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]3.8e-1029.78Show/hide
Query:  EALERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRAN-----PKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKH
        + LE   V +W+IW +RN IVH+    SP       NN + DF +A      P   +  + E   + I        ++ D +   Q +N  IGV++RD +
Subjt:  EALERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRAN-----PKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKH

Query:  GFLQAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEIQKSLE
        G + A LN          + EA+A+ +G+ LA  L + R+ +  D+L+VIQ++NDN      +   L  I+ + +S E
Subjt:  GFLQAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEIQKSLE

XP_023891683.1 uncharacterized protein LOC112003714 [Quercus suber]1.1e-0927.88Show/hide
Query:  EALERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMH---TDASVFGQQKNCGIGVVLRDKHGF
        E +  + + AW IW +RN + H        +   WINNY+ D+L AN     S Q  +E  D   +    + +    D +VF Q +  G+GV++RD +G 
Subjt:  EALERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMH---TDASVFGQQKNCGIGVVLRDKHGF

Query:  LQAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTL
        + A L+   +     L+ EA A+ E +   + + ++     S+SL+V+ ++   I   +AIA  +
Subjt:  LQAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTL

XP_030941862.1 uncharacterized protein LOC115966858 [Quercus lobata]3.2e-0930.2Show/hide
Query:  ERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSG-QIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVL
        E   + AW IWN+RN+  H      P        NY  +  +++P  A +G Q+  +      R     ++ D ++F     CG+GVV+R++ G +   L
Subjt:  ERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSG-QIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVL

Query:  NSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDN
        +   Q    PLE E  A+ EG++LAK L++K + I  D+  V+ +I+D+
Subjt:  NSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDN

XP_030964645.1 uncharacterized protein LOC115985893 [Quercus lobata]4.2e-0929.5Show/hide
Query:  AWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEA
        AW IW +RN + H        +  +W  +Y+ D+L AN       +   EV   + +      + D +VF QQK  G+GVV+RD  G + A ++   +  
Subjt:  AWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEA

Query:  TTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSI
           LE EA A+ E +  A  + ++     SDSL+V+ ++
Subjt:  TTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSI

XP_030969909.1 uncharacterized protein LOC115990203 [Quercus lobata]5.5e-0927.32Show/hide
Query:  ERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLN
        E   + AWS+WN+RNN+ H  Q  S  +       Y  +    +P    +   +E       +G   V +TD ++F   K CGIGVV+R++ G L   ++
Subjt:  ERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLN

Query:  SSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTL------------WDIKEIQKSLEC
         + +     LE EA AV EG+ LA +L +K + I +D+  V  S+  +    ++I   +            W++   ++S  C
Subjt:  SSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTL------------WDIKEIQKSLEC

TrEMBL top hitse value%identityAlignment
A0A5C7IIT4 Uncharacterized protein4.5e-0933.53Show/hide
Query:  ERICVGAWSIWNDRNNIVHH--HQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVD---IISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFL
        E +CV  W +W  RN +V+    Q        +W  +++ DF  A  K   +G + ++ V      S      ++TDA++  + K  GIGVV+RD +G +
Subjt:  ERICVGAWSIWNDRNNIVHH--HQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVD---IISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFL

Query:  QAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDI
         A L  S      P   EA+AVL G RLA    +   SI SDSLSV+  IN    +   I   L DI
Subjt:  QAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDI

A0A6J1DZK3 uncharacterized protein LOC1110249683.5e-0927.71Show/hide
Query:  VGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQ
        +  W++WNDR+ +++  +IP  +I+ EWI  Y  + +R    N    +I          G  + M+TDA+V   ++  G+GV+LR+ +  +   +     
Subjt:  VGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQ

Query:  EATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEIQKSLE
           TPL A+ +A+ EG+ LA  L V R+ + +DSL  +  I D  P      + + DI+   +  +
Subjt:  EATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEIQKSLE

A0A7J6HML3 Uncharacterized protein4.5e-0928.22Show/hide
Query:  WSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEAT
        W +W  RNN V  H+I    I   W  + +S  L  + K + +  ++     I  +    +++TDAS+   Q+ CG+  V+RD  G L     S      
Subjt:  WSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEAT

Query:  TPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEIQKSLE
        + L AEA AV  G++LA   ++    + SDS S+I+++N +    T     + DIK ++   +
Subjt:  TPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEIQKSLE

A0A7N2LJB8 RNase H domain-containing protein2.0e-0929.5Show/hide
Query:  AWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEA
        AW IW +RN + H        +  +W  +Y+ D+L AN       +   EV   + +      + D +VF QQK  G+GVV+RD  G + A ++   +  
Subjt:  AWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEA

Query:  TTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSI
           LE EA A+ E +  A  + ++     SDSL+V+ ++
Subjt:  TTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSI

A0A7N2MTJ9 Uncharacterized protein1.3e-1126.63Show/hide
Query:  EALERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLV-MHTDASVFGQQKNCGIGVVLRDKHGFLQ
        E  + +C+ AW++W++RN I H  +  S      W + YM ++  A         + + V   I   E++  ++ D +VF  QK  G+GV++RD+ G L+
Subjt:  EALERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLV-MHTDASVFGQQKNCGIGVVLRDKHGFLQ

Query:  AVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEI
        A L+         +EAEA+A  +G+  A+ + +    I  DSL +  ++ ++    +++A  +  I+E+
Subjt:  AVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G09490.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.6e-0429.76Show/hide
Query:  LVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIP
        + + TDA+   + K+ G G V+R+          S+++    PL AEAIA+   ++ A+ + + +LS+ SDS  +I +I    P
Subjt:  LVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNSSSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCATTAGAGCGTATATGTGTGGGAGCATGGTCAATTTGGAACGATAGGAATAACATTGTACATCACCATCAGATTCCTAGCCCAATTATTAGATGTGAA
TGGATTAACAACTACATGTCAGATTTTTTAAGGGCAAATCCGAAAAATGCTACTAGTGGCCAAATAGAGGAAGAAGTTGTGGATATAATTTCGAGAGGGGAGGAT
CTTGTTATGCATACCGATGCATCTGTTTTTGGTCAGCAGAAAAATTGTGGGATTGGAGTTGTTTTGCGTGATAAACATGGATTTCTACAGGCGGTGTTGAATTCA
TCTTCCCAGGAGGCTACCACCCCTTTGGAAGCGGAAGCGATCGCAGTCCTTGAAGGAATGCGTCTGGCTAAATTTTTAAATGTAAAGCGACTATCCATATTGTCT
GACTCTTTGTCGGTAATTCAGTCGATCAACGACAATATTCCGGTGGATACGGCCATTGCTACTACTCTATGGGATATCAAAGAAATTCAAAAATCTCTTGAGTGC
GGGATATGTAATGGACTATCTATTGATAGAAATGGAGGGCTAGAAGTCATTTTTAGATATGGGAGTATTGGGATAGAAGGGTATACTTACTACATTCTTATCTCA
TTGCGGAGTGAGTTTGATTTTAGATTTATGATGAACGTTGTTGCTCCATCCCTTCCTGATAGAGTAGACCTCTTCATCTCTCAACAGAGTATAACAAGTATAGCC
CCAATTAGACAAGGTGAAAATAACACTGAATTTGAGGATATCCCCGAAGAAGAAGATATCCCTGAGGAAAAAGATATCCCGAAAGTTGAAGATATAGATGAAGAA
GATACTAGAGAAATGGAGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCATTAGAGCGTATATGTGTGGGAGCATGGTCAATTTGGAACGATAGGAATAACATTGTACATCACCATCAGATTCCTAGCCCAATTATTAGATGTGAA
TGGATTAACAACTACATGTCAGATTTTTTAAGGGCAAATCCGAAAAATGCTACTAGTGGCCAAATAGAGGAAGAAGTTGTGGATATAATTTCGAGAGGGGAGGAT
CTTGTTATGCATACCGATGCATCTGTTTTTGGTCAGCAGAAAAATTGTGGGATTGGAGTTGTTTTGCGTGATAAACATGGATTTCTACAGGCGGTGTTGAATTCA
TCTTCCCAGGAGGCTACCACCCCTTTGGAAGCGGAAGCGATCGCAGTCCTTGAAGGAATGCGTCTGGCTAAATTTTTAAATGTAAAGCGACTATCCATATTGTCT
GACTCTTTGTCGGTAATTCAGTCGATCAACGACAATATTCCGGTGGATACGGCCATTGCTACTACTCTATGGGATATCAAAGAAATTCAAAAATCTCTTGAGTGC
GGGATATGTAATGGACTATCTATTGATAGAAATGGAGGGCTAGAAGTCATTTTTAGATATGGGAGTATTGGGATAGAAGGGTATACTTACTACATTCTTATCTCA
TTGCGGAGTGAGTTTGATTTTAGATTTATGATGAACGTTGTTGCTCCATCCCTTCCTGATAGAGTAGACCTCTTCATCTCTCAACAGAGTATAACAAGTATAGCC
CCAATTAGACAAGGTGAAAATAACACTGAATTTGAGGATATCCCCGAAGAAGAAGATATCCCTGAGGAAAAAGATATCCCGAAAGTTGAAGATATAGATGAAGAA
GATACTAGAGAAATGGAGGGATAA
Protein sequenceShow/hide protein sequence
MEALERICVGAWSIWNDRNNIVHHHQIPSPIIRCEWINNYMSDFLRANPKNATSGQIEEEVVDIISRGEDLVMHTDASVFGQQKNCGIGVVLRDKHGFLQAVLNS
SSQEATTPLEAEAIAVLEGMRLAKFLNVKRLSILSDSLSVIQSINDNIPVDTAIATTLWDIKEIQKSLECGICNGLSIDRNGGLEVIFRYGSIGIEGYTYYILIS
LRSEFDFRFMMNVVAPSLPDRVDLFISQQSITSIAPIRQGENNTEFEDIPEEEDIPEEKDIPKVEDIDEEDTREMEG