; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g014690 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g014690
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr09:18567239..18576822
RNA-Seq ExpressionLcy09g014690
SyntenyLcy09g014690
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]3.7e-4327.81Show/hide
Query:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLIS-PQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKY
        WG+EL  KG RWR+G+G SI +Y D+W+P    F+++S PQ PL+ R V  L + S  WN+PLL D+F   + + I  IP+A               G Y
Subjt:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLIS-PQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKY

Query:  TVQSGYKLA--------TDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK-------
        +V+SGY+LA         +    V  + + +   W            WR + + LP    L  R++   P CPKC +  E+ +HA+W C+  K       
Subjt:  TVQSGYKLA--------TDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK-------

Query:  -----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSP
                               S+  +  +F    W +WN RN  +F+G     IQ   LL   +    EF +A    H    R      P    W  P
Subjt:  -----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSP

Query:  PDNHYKLNVDASLANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRL
        P             +   G  +++ N+ GE MA   +    S      E  A ++G+  A+D G T    EMD++   N +   ++Y     P++ ++  
Subjt:  PDNHYKLNVDASLANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRL

Query:  LATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM
        L           TPR GNKVAH LA  A        W+E+ P W    L  D+
Subjt:  LATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]3.3e-4427.33Show/hide
Query:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKYT
        WG+EL  KG RWR+GNG SI +Y D+W+P    F+++SP +      V  L + S  WN+PLL D+F   + +    IP+A               G Y+
Subjt:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKYT

Query:  VQSGYKLAT--------DGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK--------
        V+SGY+LA         +    V  + + +   W            WR + + LP    L  R++   P CP C +  E+ +HA+W C+  K        
Subjt:  VQSGYKLAT--------DGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK--------

Query:  ----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP
                              S+  +  +F    W +WN RN  +F+G      Q   LL   +    EF  A    H    R      P    W  PP
Subjt:  ----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP

Query:  DNHYKLNVDASLANGE--MGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQ-------YLNELA
           YK+NVD ++ +G+   G  +++ N+ GE MA   +  + S      E  A ++G+  A+D G T    EMD++   N +   ++        + E+ 
Subjt:  DNHYKLNVDASLANGE--MGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQ-------YLNELA

Query:  PVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM
         ++H  R +           TPR GNKVAH LA  A        W+E+ P W    L  D+
Subjt:  PVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]6.7e-4531.35Show/hide
Query:  RDHIWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLI-SPQRPLTDRNVNSLLSGSQ-SWNIPLLTDLFVQDDAEQIKDIPI--------------
        R  +WGR+L  KG RWRIGNG S+ IY D W+P   T +++ SP+ PL  R V+SL+   +  W   ++ D F  D+A+ I  IPI              
Subjt:  RDHIWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLI-SPQRPLTDRNVNSLLSGSQ-SWNIPLLTDLFVQDDAEQIKDIPI--------------

Query:  -AGKYTVQSGYKLA--TDGCNEV---SSSEESYC---SSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACK-----
          G Y+V+SGYK+A   + C +    SSSEE  C     W            WR  L+ LPT  NL  R V     C  CG+  E +IH  W CK     
Subjt:  -AGKYTVQSGYKLA--TDGCNEV---SSSEESYC---SSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACK-----

Query:  ------------------KEKSNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQ-EENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP
                           E  + +D       +W +WN RN   F  +     +    L++WA+ Y  EF EA++         G   +   I W  P 
Subjt:  ------------------KEKSNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQ-EENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP

Query:  DNHYKLNVDASL--ANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLR
        +  YK+N DAS   ++   G  +II N +G+ MA A K+     +V+ AEA A V+G+ LA + G+ P             L D    L+E   ++ + +
Subjt:  DNHYKLNVDASL--ANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLR

Query:  LLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQD
           T      F    REGNK AH LA  A       IW+ED P+  +S L  +
Subjt:  LLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQD

XP_023880912.1 uncharacterized protein LOC111993298 [Quercus suber]8.0e-3828.64Show/hide
Query:  IWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQ-RPLTDRNVNSLLS-GSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------G
        I  R++ + G RWRIG+GKSI+IY + W+P   + R++SPQ   L    V +L++  ++SWNI LL   F+  +  +I  IP++               G
Subjt:  IWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQ-RPLTDRNVNSLLS-GSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------G

Query:  KYTVQSGYKLATDGCNEVSSSEESYCSS----------W------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK---
        +Y V+SGY++    C E +SS  S   S          W            WR   N+LPT  NL  R++ +D RC  C +  ET  HALW+C+  K   
Subjt:  KYTVQSGYKLATDGCNEVSSSEESYCSS----------W------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK---

Query:  -------------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWV
                                   ++ + +F    W IW  RNK   + N    +  + L + A SY+ +F        G Q +          +W+
Subjt:  -------------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWV

Query:  SPPDNHYKLNVDASL--ANGEMGSDMIIINSKGEAM-AVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVI
         P D  +K N D ++   + E G  +I+ +SKG+ + A+AEK      +VE  EA A        ++ GLT    E DS++VW  L   ++  + +  +I
Subjt:  SPPDNHYKLNVDASL--ANGEMGSDMIIINSKGEAM-AVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVI

Query:  HQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCP
             +  +     F  T R+GN VAH LA  A  +  L +W+E  P
Subjt:  HQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCP

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.4e-3729.23Show/hide
Query:  RDHIWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPI---------------A
        R  +WGR++  KG RWRIGNG+++ +Y + WIPR  TF+ IS     TD  V  L+   Q W   L+   F  +DAE I  IP+                
Subjt:  RDHIWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPI---------------A

Query:  GKYTVQSGYKLATDGCNEVSSSEESYCSS---------W------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK---
        G Y+V+SGY++A      +   E+  CS+         W            WRA+ ++LPT  NL  ++V  +P C  C    ET  HAL  C + +   
Subjt:  GKYTVQSGYKLATDGCNEVSSSEESYCSS---------W------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK---

Query:  --SNSSD------------MTIF-------------VATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEF-----VEAQTKCHGDQDRPGDTDD
          SN ++            M  F              A LW+IW +RNK +F+G + N ++   ++  A + +  F      E   K  G+ +R      
Subjt:  --SNSSD------------MTIF-------------VATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEF-----VEAQTKCHGDQDRPGDTDD

Query:  PRTIEWVSPPDNHYKLNVDAS--LANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLN
            +W  PP+   K+NVDA+  + N   G  +++ +S G   A A K  R   +V  AEA A+  G+ +A  + +T    E DS  V +L++ +   L 
Subjt:  PRTIEWVSPPDNHYKLNVDAS--LANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLN

Query:  ELAPVIHQLRLLATTQHIRGFLL--TPREGNKVAHQLATHARTTKHLEIWLEDCP
        E+  +I  ++     Q+ + F    +PR+ N  AH LA  A   K   IWL++ P
Subjt:  ELAPVIHQLRLLATTQHIRGFLL--TPREGNKVAHQLATHARTTKHLEIWLEDCP

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein1.8e-4327.81Show/hide
Query:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLIS-PQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKY
        WG+EL  KG RWR+G+G SI +Y D+W+P    F+++S PQ PL+ R V  L + S  WN+PLL D+F   + + I  IP+A               G Y
Subjt:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLIS-PQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKY

Query:  TVQSGYKLA--------TDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK-------
        +V+SGY+LA         +    V  + + +   W            WR + + LP    L  R++   P CPKC +  E+ +HA+W C+  K       
Subjt:  TVQSGYKLA--------TDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK-------

Query:  -----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSP
                               S+  +  +F    W +WN RN  +F+G     IQ   LL   +    EF +A    H    R      P    W  P
Subjt:  -----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSP

Query:  PDNHYKLNVDASLANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRL
        P             +   G  +++ N+ GE MA   +    S      E  A ++G+  A+D G T    EMD++   N +   ++Y     P++ ++  
Subjt:  PDNHYKLNVDASLANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRL

Query:  LATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM
        L           TPR GNKVAH LA  A        W+E+ P W    L  D+
Subjt:  LATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM

A0A5E4FZN9 PREDICTED: retrotransposon1.6e-4427.33Show/hide
Query:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKYT
        WG+EL  KG RWR+GNG SI +Y D+W+P    F+++SP +      V  L + S  WN+PLL D+F   + +    IP+A               G Y+
Subjt:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKYT

Query:  VQSGYKLAT--------DGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK--------
        V+SGY+LA         +    V  + + +   W            WR + + LP    L  R++   P CP C +  E+ +HA+W C+  K        
Subjt:  VQSGYKLAT--------DGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK--------

Query:  ----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP
                              S+  +  +F    W +WN RN  +F+G      Q   LL   +    EF  A    H    R      P    W  PP
Subjt:  ----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP

Query:  DNHYKLNVDASLANGE--MGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQ-------YLNELA
           YK+NVD ++ +G+   G  +++ N+ GE MA   +  + S      E  A ++G+  A+D G T    EMD++   N +   ++        + E+ 
Subjt:  DNHYKLNVDASLANGE--MGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQ-------YLNELA

Query:  PVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM
         ++H  R +           TPR GNKVAH LA  A        W+E+ P W    L  D+
Subjt:  PVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM

A0A6J1DAR4 uncharacterized protein LOC1110189543.3e-4531.35Show/hide
Query:  RDHIWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLI-SPQRPLTDRNVNSLLSGSQ-SWNIPLLTDLFVQDDAEQIKDIPI--------------
        R  +WGR+L  KG RWRIGNG S+ IY D W+P   T +++ SP+ PL  R V+SL+   +  W   ++ D F  D+A+ I  IPI              
Subjt:  RDHIWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLI-SPQRPLTDRNVNSLLSGSQ-SWNIPLLTDLFVQDDAEQIKDIPI--------------

Query:  -AGKYTVQSGYKLA--TDGCNEV---SSSEESYC---SSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACK-----
          G Y+V+SGYK+A   + C +    SSSEE  C     W            WR  L+ LPT  NL  R V     C  CG+  E +IH  W CK     
Subjt:  -AGKYTVQSGYKLA--TDGCNEV---SSSEESYC---SSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACK-----

Query:  ------------------KEKSNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQ-EENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP
                           E  + +D       +W +WN RN   F  +     +    L++WA+ Y  EF EA++         G   +   I W  P 
Subjt:  ------------------KEKSNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQ-EENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPP

Query:  DNHYKLNVDASL--ANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLR
        +  YK+N DAS   ++   G  +II N +G+ MA A K+     +V+ AEA A V+G+ LA + G+ P             L D    L+E   ++ + +
Subjt:  DNHYKLNVDASL--ANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLR

Query:  LLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQD
           T      F    REGNK AH LA  A       IW+ED P+  +S L  +
Subjt:  LLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQD

A0A803PF28 Uncharacterized protein2.0e-3928.81Show/hide
Query:  IWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDI--------------PIAGKYT
        IWGREL +KG RW +G+G+SI +  D W+PR+ +F L +  +   +  V+SLL  + SW +  +   F QDD   +  I                 G Y+
Subjt:  IWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDI--------------PIAGKYT

Query:  VQSGYKL-----ATDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEKSNSSDMTIFVA
        V SGYKL     AT  C+ +SS +  +   W            WR   + LPT + L  R +  D RC  C +  E   HALW    +     D   F+ 
Subjt:  VQSGYKL-----ATDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEKSNSSDMTIFVA

Query:  TLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPPDNHYKLNVDASLANGEMGSDM--IIINSKGEAM
          W +W  RNK +FQ   +  ++++  + WA    ++ +E Q   H  Q+ P      + ++W+ PP +   +N DASL  G+ G  +  +I +SKG  +
Subjt:  TLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPPDNHYKLNVDASLANGEMGSDM--IIINSKGEAM

Query:  AVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTK
            +F      V  AEA A++ G+ LA+   +       DS  +   +H      ++   +I ++  +  T     FL  PR+ N VA+ LA  +R  +
Subjt:  AVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTK

Query:  HLEIWLEDCPIWAQSSLAQD
           IW +  P  A ++L  D
Subjt:  HLEIWLEDCPIWAQSSLAQD

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)1.8e-4327.81Show/hide
Query:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLIS-PQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKY
        WG+EL  KG RWR+G+G SI +Y D+W+P    F+++S PQ PL+ R V  L + S  WN+PLL D+F   + + I  IP+A               G Y
Subjt:  WGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLIS-PQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIA---------------GKY

Query:  TVQSGYKLA--------TDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK-------
        +V+SGY+LA         +    V  + + +   W            WR + + LP    L  R++   P CPKC +  E+ +HA+W C+  K       
Subjt:  TVQSGYKLA--------TDGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEK-------

Query:  -----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSP
                               S+  +  +F    W +WN RN  +F+G     IQ   LL   +    EF +A    H    R      P    W  P
Subjt:  -----------------------SNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSP

Query:  PDNHYKLNVDASLANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRL
        P             +   G  +++ N+ GE MA   +    S      E  A ++G+  A+D G T    EMD++   N +   ++Y     P++ ++  
Subjt:  PDNHYKLNVDASLANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHDRDQYLNELAPVIHQLRL

Query:  LATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM
        L           TPR GNKVAH LA  A        W+E+ P W    L  D+
Subjt:  LATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.6e-1825.49Show/hide
Query:  GRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQS---WNIPLLTDLFVQDDAEQIKDIPIA---------------GK
        G  L  KG R  IG+G++I I  D  I  +   R ++ +    +  +N+L     S   W+   ++    Q D   I  I +A               G+
Subjt:  GRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQS---WNIPLLTDLFVQDDAEQIKDIPIA---------------GK

Query:  YTVQSGYKLAT-------DGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWAC-----------
        YTV+SGY L T          N    S +     W            WRA    L T   L  R +  DP CP+C + NE+  HAL+ C           
Subjt:  YTVQSGYKLAT-------DGCNEVSSSEESYCSSW------------WRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWAC-----------

Query:  ----------KKEKSNSSDMTIFVA--------------TLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTI
                     + N S++  FV                +W IW +RN  VF  N+      + +L  A +   +++ A T+ H     P        I
Subjt:  ----------KKEKSNSSDMTIFVA--------------TLWSIWNSRNKDVFQGNRNNYIQEENLLDWASSYISEFVEAQTKCHGDQDRPGDTDDPRTI

Query:  EWVSPPDNHYKLNVDA--SLANGEMGSDMIIINSKGEAMAVAE-KFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHD---RDQYLN
        EW +PP  + K N DA   +   E     II N  G  ++    K   TS  +E AE +AL+  +      G T V+ E D + + NL++         N
Subjt:  EWVSPPDNHYKLNVDA--SLANGEMGSDMIIINSKGEAMAVAE-KFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDSKIVWNLLHD---RDQYLN

Query:  ELAPVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQD
         L  +       A+ Q   GF+   R+GNK+AH LA +  T           PIW       D
Subjt:  ELAPVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTAGCAGATCATTTGAGCCAGGAGGAGTTTGAGAAGACTACGAGGCGAGATTCTAGAGACTCGGGAGCCTTAGGCTCCAATGTGAATCACACCTTTGCATACGC
ATCATGGAGTTCTTGTATTTATAGATGCAACGATCAATCCCCAAAAGATGGATCGGGTTACAGTATTTTGGTTACATCATCTGATGTGAGTATGGTAAAAGGGGAGCAAC
AAGCTACACCTGTGGCAATGGATGAAATTATTCAAGCTACTCCAGCAAGAGTTACAGAAGAGATGAACCTTCATCTAGATCGTGTATTTGTAGCTACGGATATACTACCC
CCAGGAAGATATCCTAAAAGCACAGTTGGGAAGCAGACCATCTTATGTTTGGAGAGGGATCATATATGGGGACGAGAATTAGCTGTGAAAGGAGGAAGGTGGAGAATTGG
AAACGGAAAATCTATTGACATCTATAACGATCAGTGGATTCCGAGAACGAAAACTTTCAGGTTGATATCTCCTCAAAGACCGTTAACTGACCGTAACGTTAACAGTCTCC
TGTCCGGTAGTCAATCCTGGAATATTCCATTACTAACAGATCTCTTTGTGCAGGATGATGCAGAACAAATTAAGGATATCCCAATAGCAGGAAAGTATACAGTCCAGAGC
GGATATAAACTTGCAACAGATGGGTGTAATGAGGTGTCTTCATCAGAGGAATCCTATTGCAGCTCTTGGTGGAGGGCCAGTCTGAATATCCTCCCAACCAACATGAATCT
TGTCATTCGTAGGGTCCATAATGATCCCCGTTGCCCAAAGTGTGGAAAAGCAAATGAAACAACTATTCATGCTCTGTGGGCCTGCAAGAAGGAGAAATCAAACTCTAGTG
ACATGACAATCTTTGTGGCAACTCTATGGTCCATTTGGAACAGCAGAAATAAAGATGTTTTCCAGGGAAACCGGAACAACTACATTCAGGAAGAGAACCTTTTAGATTGG
GCGTCAAGTTACATTTCAGAATTCGTGGAGGCACAAACAAAGTGCCACGGAGACCAGGATCGACCAGGAGATACTGATGATCCCCGAACAATAGAGTGGGTATCACCGCC
TGACAACCATTACAAGTTAAATGTGGATGCGTCACTAGCAAACGGGGAGATGGGGTCGGACATGATTATCATAAACTCAAAGGGAGAAGCGATGGCAGTGGCAGAAAAGT
TCAGGAGAACGAGTTGCAATGTAGAATGGGCAGAAGCTCAGGCGTTGGTAGATGGAGTGCATCTAGCTATGGATTCAGGCTTAACACCAGTTTGGGCAGAGATGGATTCC
AAAATTGTTTGGAATTTACTTCATGATCGAGATCAATATCTAAATGAGTTAGCTCCAGTAATCCACCAACTCAGACTTTTGGCCACAACTCAACACATCAGGGGTTTCCT
TCTAACCCCAAGGGAAGGCAATAAAGTAGCTCACCAGTTAGCTACCCATGCTCGCACAACAAAGCATTTAGAAATTTGGTTAGAAGACTGTCCTATTTGGGCTCAAAGCA
GTTTAGCTCAAGATATGCAGTTGATGAATGTCCCAACCGTTTCTTTTGGCTCCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCTAGCAGATCATTTGAGCCAGGAGGAGTTTGAGAAGACTACGAGGCGAGATTCTAGAGACTCGGGAGCCTTAGGCTCCAATGTGAATCACACCTTTGCATACGC
ATCATGGAGTTCTTGTATTTATAGATGCAACGATCAATCCCCAAAAGATGGATCGGGTTACAGTATTTTGGTTACATCATCTGATGTGAGTATGGTAAAAGGGGAGCAAC
AAGCTACACCTGTGGCAATGGATGAAATTATTCAAGCTACTCCAGCAAGAGTTACAGAAGAGATGAACCTTCATCTAGATCGTGTATTTGTAGCTACGGATATACTACCC
CCAGGAAGATATCCTAAAAGCACAGTTGGGAAGCAGACCATCTTATGTTTGGAGAGGGATCATATATGGGGACGAGAATTAGCTGTGAAAGGAGGAAGGTGGAGAATTGG
AAACGGAAAATCTATTGACATCTATAACGATCAGTGGATTCCGAGAACGAAAACTTTCAGGTTGATATCTCCTCAAAGACCGTTAACTGACCGTAACGTTAACAGTCTCC
TGTCCGGTAGTCAATCCTGGAATATTCCATTACTAACAGATCTCTTTGTGCAGGATGATGCAGAACAAATTAAGGATATCCCAATAGCAGGAAAGTATACAGTCCAGAGC
GGATATAAACTTGCAACAGATGGGTGTAATGAGGTGTCTTCATCAGAGGAATCCTATTGCAGCTCTTGGTGGAGGGCCAGTCTGAATATCCTCCCAACCAACATGAATCT
TGTCATTCGTAGGGTCCATAATGATCCCCGTTGCCCAAAGTGTGGAAAAGCAAATGAAACAACTATTCATGCTCTGTGGGCCTGCAAGAAGGAGAAATCAAACTCTAGTG
ACATGACAATCTTTGTGGCAACTCTATGGTCCATTTGGAACAGCAGAAATAAAGATGTTTTCCAGGGAAACCGGAACAACTACATTCAGGAAGAGAACCTTTTAGATTGG
GCGTCAAGTTACATTTCAGAATTCGTGGAGGCACAAACAAAGTGCCACGGAGACCAGGATCGACCAGGAGATACTGATGATCCCCGAACAATAGAGTGGGTATCACCGCC
TGACAACCATTACAAGTTAAATGTGGATGCGTCACTAGCAAACGGGGAGATGGGGTCGGACATGATTATCATAAACTCAAAGGGAGAAGCGATGGCAGTGGCAGAAAAGT
TCAGGAGAACGAGTTGCAATGTAGAATGGGCAGAAGCTCAGGCGTTGGTAGATGGAGTGCATCTAGCTATGGATTCAGGCTTAACACCAGTTTGGGCAGAGATGGATTCC
AAAATTGTTTGGAATTTACTTCATGATCGAGATCAATATCTAAATGAGTTAGCTCCAGTAATCCACCAACTCAGACTTTTGGCCACAACTCAACACATCAGGGGTTTCCT
TCTAACCCCAAGGGAAGGCAATAAAGTAGCTCACCAGTTAGCTACCCATGCTCGCACAACAAAGCATTTAGAAATTTGGTTAGAAGACTGTCCTATTTGGGCTCAAAGCA
GTTTAGCTCAAGATATGCAGTTGATGAATGTCCCAACCGTTTCTTTTGGCTCCTTGTAG
Protein sequenceShow/hide protein sequence
MMLADHLSQEEFEKTTRRDSRDSGALGSNVNHTFAYASWSSCIYRCNDQSPKDGSGYSILVTSSDVSMVKGEQQATPVAMDEIIQATPARVTEEMNLHLDRVFVATDILP
PGRYPKSTVGKQTILCLERDHIWGRELAVKGGRWRIGNGKSIDIYNDQWIPRTKTFRLISPQRPLTDRNVNSLLSGSQSWNIPLLTDLFVQDDAEQIKDIPIAGKYTVQS
GYKLATDGCNEVSSSEESYCSSWWRASLNILPTNMNLVIRRVHNDPRCPKCGKANETTIHALWACKKEKSNSSDMTIFVATLWSIWNSRNKDVFQGNRNNYIQEENLLDW
ASSYISEFVEAQTKCHGDQDRPGDTDDPRTIEWVSPPDNHYKLNVDASLANGEMGSDMIIINSKGEAMAVAEKFRRTSCNVEWAEAQALVDGVHLAMDSGLTPVWAEMDS
KIVWNLLHDRDQYLNELAPVIHQLRLLATTQHIRGFLLTPREGNKVAHQLATHARTTKHLEIWLEDCPIWAQSSLAQDMQLMNVPTVSFGSL