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Lcy09g014810 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g014810
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr09:19163916..19170157
RNA-Seq ExpressionLcy09g014810
SyntenyLcy09g014810
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEE63330.1 hypothetical protein OsJ_18141 [Oryza sativa Japonica Group]7.6e-0536.89Show/hide
Query:  HPRRFEERWRQTLEGYWKLNCDAS-WNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSLQVVHLLTGEE
        HP R   RW     G+ KLN D S +N+G++R  I  +++  DG +V A F      W +  +EA   I+GLK ++     ++V+E D L +V LL GEE
Subjt:  HPRRFEERWRQTLEGYWKLNCDAS-WNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSLQVVHLLTGEE

Query:  DDT
          T
Subjt:  DDT

KAF8695375.1 hypothetical protein HU200_037607 [Digitaria exilis]1.5e-0530.36Show/hide
Query:  EFTNLQGQGSRHPRRFEERWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSL
        E  N+  Q         E+W +   GY K+NCDA++NE  + GG   +++  +G +V+AG   ++        E +  ++G++ +  L   K V+E D+L
Subjt:  EFTNLQGQGSRHPRRFEERWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSL

Query:  QVVHLLTGEEDD
        QVVH  T +  D
Subjt:  QVVHLLTGEEDD

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]5.8e-0537.23Show/hide
Query:  RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTS-PKVVIELDSLQVVHLLTGEEDD
        RW       WKLN DASW+E  + GGI  IL    G +V AG   I  + +I  LE +  I GL+ + + S   + +E DS++V+ L+  E+ D
Subjt:  RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTS-PKVVIELDSLQVVHLLTGEEDD

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.2e-0532.14Show/hide
Query:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTSPKVV-
        TNL+G+ +       RR E+    +W+      WKLN +A+W      GGI  IL+   G ++ A  R I  +  I +LE +   EGL+++     + + 
Subjt:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTSPKVV-

Query:  IELDSLQVVHLL
        +E DSL+ +HLL
Subjt:  IELDSLQVVHLL

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]4.4e-0531.67Show/hide
Query:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSV------PLT
        TNL+G+ +       RR  +    RW+      WKLN DA+W      GGI  IL+   G ++ A  R I  +  I +LE +   EGL+++      P+ 
Subjt:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSV------PLT

Query:  SP---KVVIELDSLQVVHLL
              + +E DSL+ +HLL
Subjt:  SP---KVVIELDSLQVVHLL

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134125.7e-0632.14Show/hide
Query:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTSPKVV-
        TNL+G+ +       RR E+    +W+      WKLN +A+W      GGI  IL+   G ++ A  R I  +  I +LE +   EGL+++     + + 
Subjt:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTSPKVV-

Query:  IELDSLQVVHLL
        +E DSL+ +HLL
Subjt:  IELDSLQVVHLL

A0A6J1CQG0 uncharacterized protein LOC1110132162.8e-0537.23Show/hide
Query:  RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTS-PKVVIELDSLQVVHLLTGEEDD
        RW       WKLN DASW+E  + GGI  IL    G +V AG   I  + +I  LE +  I GL+ + + S   + +E DS++V+ L+  E+ D
Subjt:  RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSVPLTS-PKVVIELDSLQVVHLLTGEEDD

A0A6J1DSV1 uncharacterized protein LOC1110236082.2e-0531.67Show/hide
Query:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSV------PLT
        TNL+G+ +       RR  +    RW+      WKLN DA+W      GGI  IL+   G ++ A  R I  +  I +LE +   EGL+++      P+ 
Subjt:  TNLQGQGSRHP----RRFEE----RWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLKSV------PLT

Query:  SP---KVVIELDSLQVVHLL
              + +E DSL+ +HLL
Subjt:  SP---KVVIELDSLQVVHLL

B9FH08 RNase H domain-containing protein3.7e-0536.89Show/hide
Query:  HPRRFEERWRQTLEGYWKLNCDAS-WNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSLQVVHLLTGEE
        HP R   RW     G+ KLN D S +N+G++R  I  +++  DG +V A F      W +  +EA   I+GLK ++     ++V+E D L +V LL GEE
Subjt:  HPRRFEERWRQTLEGYWKLNCDAS-WNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSLQVVHLLTGEE

Query:  DDT
          T
Subjt:  DDT

I1PUN6 RNase H domain-containing protein3.7e-0536.89Show/hide
Query:  HPRRFEERWRQTLEGYWKLNCDAS-WNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSLQVVHLLTGEE
        HP R   RW     G+ KLN D S +N+G++R  I  +++  DG +V A F      W +  +EA   I+GLK ++     ++V+E D L +V LL GEE
Subjt:  HPRRFEERWRQTLEGYWKLNCDAS-WNEGNKRGGIDLILQQGDGTLVTAGFRSIHWQWKICWLEALVAIEGLK-SVPLTSPKVVIELDSLQVVHLLTGEE

Query:  DDT
          T
Subjt:  DDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGAATATTCGCGATTAGATAGGTTTCTTATAAGCGTTGGAATGCAGGGTCATTGCAGTGTTTTTAAGGTGTATCATCTGGCTCACTTAGCTTCGGACCAT
AGACCTATTTTGGCGAAGCGGATGGAAGAGTTCACAAATCTTCAAGGCCAAGGTTCAAGACACCCAAGGAGATTTGAGGAGCGATGGCGTCAAACTCTTGAGGGT
TATTGGAAACTTAACTGCGATGCCTCGTGGAATGAGGGAAATAAACGAGGTGGAATTGACTTGATTCTTCAACAAGGGGATGGAACGTTGGTGACCGCAGGGTTT
AGAAGCATTCATTGGCAATGGAAGATCTGTTGGTTGGAAGCCCTAGTTGCAATTGAAGGGTTGAAATCGGTGCCATTGACATCTCCTAAAGTGGTTATTGAGTTG
GATTCTCTTCAAGTGGTTCATCTACTTACAGGTGAAGAAGATGACACATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCGAATATTCGCGATTAGATAGGTTTCTTATAAGCGTTGGAATGCAGGGTCATTGCAGTGTTTTTAAGGTGTATCATCTGGCTCACTTAGCTTCGGACCAT
AGACCTATTTTGGCGAAGCGGATGGAAGAGTTCACAAATCTTCAAGGCCAAGGTTCAAGACACCCAAGGAGATTTGAGGAGCGATGGCGTCAAACTCTTGAGGGT
TATTGGAAACTTAACTGCGATGCCTCGTGGAATGAGGGAAATAAACGAGGTGGAATTGACTTGATTCTTCAACAAGGGGATGGAACGTTGGTGACCGCAGGGTTT
AGAAGCATTCATTGGCAATGGAAGATCTGTTGGTTGGAAGCCCTAGTTGCAATTGAAGGGTTGAAATCGGTGCCATTGACATCTCCTAAAGTGGTTATTGAGTTG
GATTCTCTTCAAGTGGTTCATCTACTTACAGGTGAAGAAGATGACACATAA
Protein sequenceShow/hide protein sequence
MTEYSRLDRFLISVGMQGHCSVFKVYHLAHLASDHRPILAKRMEEFTNLQGQGSRHPRRFEERWRQTLEGYWKLNCDASWNEGNKRGGIDLILQQGDGTLVTAGF
RSIHWQWKICWLEALVAIEGLKSVPLTSPKVVIELDSLQVVHLLTGEEDDT