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Lcy09g014880 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g014880
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTransposase
Genome locationChr09:19383588..19383935
RNA-Seq ExpressionLcy09g014880
SyntenyLcy09g014880
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031739753.1 uncharacterized protein LOC116403284 [Cucumis sativus]3.5e-2346.96Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  +RLSK+YELGV+ F++F   +    S IRCPCLKCGN + H  + VR+HL +NG+D SY IWFWHGE+LP  S+ + +  F+    +++Y V
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            EM++  HE++S
Subjt:  NETIEMVQAAHEDFS

XP_031739988.1 uncharacterized protein LOC116403337 [Cucumis sativus]1.4e-2447.83Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  +RLSK+YELGV+ F++F   +    S IRCPCLKCGN + H  + VR+HL +NG+D SY IWFWHGE+LP  S+ + +  F     ++  DV
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            EM++ AHE++S
Subjt:  NETIEMVQAAHEDFS

XP_031741731.1 uncharacterized protein LOC116403926 [Cucumis sativus]1.6e-2348.7Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  +RLSK+YELGV+ F++F   +    S IRCPCLKCGN + H  + VR+HL +NG+D SY IWFWHGE+LP  S+ + +  F+     E+ DV
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            EM++ AHE++S
Subjt:  NETIEMVQAAHEDFS

XP_031742172.1 uncharacterized protein LOC116404095 [Cucumis sativus]5.9e-2347.83Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  +RLSK+YELGV+ F++F   +    S IRCPCLKCGN + ++ + VR+HL +NG+D SY IWFWHGE+LP  S+ + +  F+     E+ DV
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            EM++ AHE++S
Subjt:  NETIEMVQAAHEDFS

XP_031742381.1 uncharacterized protein LOC116404332 [Cucumis sativus]7.0e-2448.7Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  +RLSK+YELGV+ F++F   +    S IRCPCLKCGN + H  + VR+HL +NG+D SY IWFWHGE+LP  S+ + +  F+     E+ DV
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            EM++ AHE++S
Subjt:  NETIEMVQAAHEDFS

TrEMBL top hitse value%identityAlignment
A0A5A7TUX7 Transposase6.0e-2147.41Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGE-KLPKKSYENNTKTFNTFENDEEYD
        MD S M  +RL K+YELGV+ F+ F   +  D S IRCPCLKCGN +      +R+HL +NG+D SY IWFWHGE +LP+ S    +  F+T    E  D
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGE-KLPKKSYENNTKTFNTFENDEEYD

Query:  VNETIEMVQAAHEDFS
        V    EM++ AHE++S
Subjt:  VNETIEMVQAAHEDFS

A0A5A7TZY3 Transposase3.5e-2149.57Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  NR+S+EYELGVK F++F  RHA   S IRCPCLKCGN    D   VR HL  NG+D SY IWFWHGE    ++  N     N  E   + D+
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
           I MVQ   + FS
Subjt:  NETIEMVQAAHEDFS

A0A5A7U2S8 Transposase3.2e-2246.96Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD   M  +RLSKEYELGV+ F+ F   +    S IRCPCLKCGN + H  ++VR+HL +NG+D SY IWFWHG+    +S+   +  F+T    EE DV
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            E+++ AHE++S
Subjt:  NETIEMVQAAHEDFS

A0A5A7UL63 Transposase4.2e-2246.96Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  +RLSK+YELGV+ F+ F   +  D S IRCP LKCGN +      +R+HL +NG+D SY +WFWHGE+LP+      +  F+T+   EE DV
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            EM++ AHE++S
Subjt:  NETIEMVQAAHEDFS

A0A5D3CRI9 Transposase1.2e-2147.83Show/hide
Query:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV
        MD S M  +RLSK+Y LGV+ F+ F   +  D S IRCPCLK GN +      +R+HL +NG+D SY IWFWHGE+LP+ S    +  F+T    EE DV
Subjt:  MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDV

Query:  NETIEMVQAAHEDFS
            EM++ AHE++S
Subjt:  NETIEMVQAAHEDFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATTCTTTGATGAGAACAAATAGATTGTCAAAAGAATATGAGTTGGGTGTGAAAGGATTTTTAGAATTTGCTCTAAGACATGCATATGATCCATCCAGAATTCG
TTGTCCATGCTTAAAATGTGGAAACATTGATATGCATGATGGACAAGAAGTTAGAAACCATTTAATTATAAATGGAATGGATCTAAGTTATACCATATGGTTTTGGCATG
GTGAAAAACTTCCTAAGAAGTCATATGAAAACAACACAAAGACTTTCAACACATTCGAAAATGATGAAGAATATGATGTTAATGAGACAATTGAGATGGTGCAAGCAGCA
CATGAAGATTTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAATTCTTTGATGAGAACAAATAGATTGTCAAAAGAATATGAGTTGGGTGTGAAAGGATTTTTAGAATTTGCTCTAAGACATGCATATGATCCATCCAGAATTCG
TTGTCCATGCTTAAAATGTGGAAACATTGATATGCATGATGGACAAGAAGTTAGAAACCATTTAATTATAAATGGAATGGATCTAAGTTATACCATATGGTTTTGGCATG
GTGAAAAACTTCCTAAGAAGTCATATGAAAACAACACAAAGACTTTCAACACATTCGAAAATGATGAAGAATATGATGTTAATGAGACAATTGAGATGGTGCAAGCAGCA
CATGAAGATTTTTCTTAG
Protein sequenceShow/hide protein sequence
MDNSLMRTNRLSKEYELGVKGFLEFALRHAYDPSRIRCPCLKCGNIDMHDGQEVRNHLIINGMDLSYTIWFWHGEKLPKKSYENNTKTFNTFENDEEYDVNETIEMVQAA
HEDFS