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Lcy09g015560 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g015560
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionzf-RVT domain-containing protein
Genome locationChr09:23158298..23158976
RNA-Seq ExpressionLcy09g015560
SyntenyLcy09g015560
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN73452.1 hypothetical protein VITISV_028992 [Vitis vinifera]1.2e-2134.48Show/hide
Query:  AKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFI
        AK +W    P K+K   W +AH  +NTN+ LQ R PY SL P WC LCK + E  +H+F  CP+    W+++ K  G    L  +  D+L     G    
Subjt:  AKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFI

Query:  NIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIYYA
             LW      F W++W+ERN R+F+    S +  +D++++Y+
Subjt:  NIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIYYA

CAN80039.1 hypothetical protein VITISV_040551 [Vitis vinifera]4.5e-2139.37Show/hide
Query:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN
        K +W    P K+K F+W +AHK +NTN++LQ R PY +LSP  C LC    E  +H+F  C L    W R+ +S       L ++ D+L+S   G  F  
Subjt:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN

Query:  IKGLLWMNIARAFFWVLWKERNRRVFQ
           +LW N   A  WV+W+ERN R+F+
Subjt:  IKGLLWMNIARAFFWVLWKERNRRVFQ

RVW25634.1 putative ribonuclease H protein [Vitis vinifera]3.5e-2135.92Show/hide
Query:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN
        K +W    P K+K F+W +AHK +NTN++LQ R PY +LSP  C LC    E  +H+F  C L    W R+ +S         ++ D+LAS   G  F  
Subjt:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN

Query:  IKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIY
           +LW N   A  WV+W+ERN R+F+    + +  +D +++
Subjt:  IKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIY

RVW74542.1 putative ribonuclease H protein [Vitis vinifera]2.6e-2139.84Show/hide
Query:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN
        K +W    P K+K F+W +AHK +NTN++LQ R PY +LSP  C LC    E  +H+F  C L    W R+ +S         ++ D+LAS   G  F  
Subjt:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN

Query:  IKGLLWMNIARAFFWVLWKERNRRVFQG
           +LW N   A  WV+W+ERN R+F+G
Subjt:  IKGLLWMNIARAFFWVLWKERNRRVFQG

XP_030505044.1 uncharacterized protein LOC115720016 [Cannabis sativa]5.9e-2134.53Show/hide
Query:  PYLAKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGH
        P   K +W+     ++K F+W +AH  +N ++VLQRR P++ +SPGWC  CKSS E  EH+F  C  +   WS + + FG   +L  ++  +L S + G 
Subjt:  PYLAKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGH

Query:  PFINIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDA
             + +LW     A  W +W ERN R+F+ ++ S  +
Subjt:  PFINIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDA

TrEMBL top hitse value%identityAlignment
A0A438CR03 Putative ribonuclease H protein1.7e-2135.92Show/hide
Query:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN
        K +W    P K+K F+W +AHK +NTN++LQ R PY +LSP  C LC    E  +H+F  C L    W R+ +S         ++ D+LAS   G  F  
Subjt:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN

Query:  IKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIY
           +LW N   A  WV+W+ERN R+F+    + +  +D +++
Subjt:  IKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIY

A0A438EGK9 Transposon TX1 uncharacterized 149 kDa protein2.9e-2132.28Show/hide
Query:  GNISLIEPYL---AKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMG
        G++ +  P L   AK +W    P K+K   W +AH  +NTN+ LQ R PY SL P WC LCK + E  +H+F  CP+    W+++ K  G       +  
Subjt:  GNISLIEPYL---AKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMG

Query:  DILASVMLGHPFINIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIYYA
        D+L     G         LW        W++W+ERN R+F+    S +  +D++++Y+
Subjt:  DILASVMLGHPFINIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIYYA

A0A438GQT9 Putative ribonuclease H protein1.3e-2139.84Show/hide
Query:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN
        K +W    P K+K F+W +AHK +NTN++LQ R PY +LSP  C LC    E  +H+F  C L    W R+ +S         ++ D+LAS   G  F  
Subjt:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN

Query:  IKGLLWMNIARAFFWVLWKERNRRVFQG
           +LW N   A  WV+W+ERN R+F+G
Subjt:  IKGLLWMNIARAFFWVLWKERNRRVFQG

A5AG22 zf-RVT domain-containing protein2.2e-2139.37Show/hide
Query:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN
        K +W    P K+K F+W +AHK +NTN++LQ R PY +LSP  C LC    E  +H+F  C L    W R+ +S       L ++ D+L+S   G  F  
Subjt:  KIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFIN

Query:  IKGLLWMNIARAFFWVLWKERNRRVFQ
           +LW N   A  WV+W+ERN R+F+
Subjt:  IKGLLWMNIARAFFWVLWKERNRRVFQ

A5AIV6 zf-RVT domain-containing protein5.7e-2234.48Show/hide
Query:  AKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFI
        AK +W    P K+K   W +AH  +NTN+ LQ R PY SL P WC LCK + E  +H+F  CP+    W+++ K  G    L  +  D+L     G    
Subjt:  AKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHPFI

Query:  NIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIYYA
             LW      F W++W+ERN R+F+    S +  +D++++Y+
Subjt:  NIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIYYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGGCAATATTAGTCTCATTGAGCCATATTTGGCAAAGATTATATGGAGAGACAATTACCCAAAGAAGATTAAATTCTTTCTCTGGGAACTAGCCCACAAATCCAT
CAACACAAATGAGGTTCTCCAGAGACGCATGCCTTACATGTCCCTTTCCCCTGGATGGTGCTCTTTATGTAAATCTAGTGATGAATTGCAGGAACACATTTTTGCTATTT
GCCCCCTTGCTTGGAATTTCTGGAGTAGGATCACAAAGTCTTTTGGGTGGTCCATGTCTCTCTTGGATAATATGGGGGATATCCTTGCCTCCGTTATGTTGGGTCATCCT
TTCATCAACATCAAAGGCCTTTTATGGATGAACATCGCTAGAGCTTTCTTTTGGGTCTTATGGAAAGAAAGAAATCGAAGAGTTTTCCAAGGAATAGATCCCTCTTTTGA
TGCTTTTTTTGACATTGTTATATACTATGCTATCTCTTGA
mRNA sequenceShow/hide mRNA sequence
GAGATGGCCCCTCAACCCAAATGGTTCTTTTTCCTCAAAATCCCTCCTCTTTGACATGACGGGCAATATTAGTCTCATTGAGCCATATTTGGCAAAGATTATATGGAGAG
ACAATTACCCAAAGAAGATTAAATTCTTTCTCTGGGAACTAGCCCACAAATCCATCAACACAAATGAGGTTCTCCAGAGACGCATGCCTTACATGTCCCTTTCCCCTGGA
TGGTGCTCTTTATGTAAATCTAGTGATGAATTGCAGGAACACATTTTTGCTATTTGCCCCCTTGCTTGGAATTTCTGGAGTAGGATCACAAAGTCTTTTGGGTGGTCCAT
GTCTCTCTTGGATAATATGGGGGATATCCTTGCCTCCGTTATGTTGGGTCATCCTTTCATCAACATCAAAGGCCTTTTATGGATGAACATCGCTAGAGCTTTCTTTTGGG
TCTTATGGAAAGAAAGAAATCGAAGAGTTTTCCAAGGAATAGATCCCTCTTTTGATGCTTTTTTTGACATTGTTATATACTATGCTATCTCTTGATGTAAACTCTCTCCC
CTTCTTGCTTCGTACACATATACTTCCCTTCTAAATAGTTGGGAAAGTCTTTTGTAATCTCTATGGATCTTGTATCCCTTTTGTAAATTTCATACATCAATGAAATTGTT
TCTTATAAAAAAAACTTCT
Protein sequenceShow/hide protein sequence
MTGNISLIEPYLAKIIWRDNYPKKIKFFLWELAHKSINTNEVLQRRMPYMSLSPGWCSLCKSSDELQEHIFAICPLAWNFWSRITKSFGWSMSLLDNMGDILASVMLGHP
FINIKGLLWMNIARAFFWVLWKERNRRVFQGIDPSFDAFFDIVIYYAIS