; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g016200 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g016200
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr09:27279552..27280034
RNA-Seq ExpressionLcy09g016200
SyntenyLcy09g016200
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465177.1 PREDICTED: uncharacterized protein LOC103502841 [Cucumis melo]8.6e-1853.12Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKH
        MLE +RM+LQRWFFE +ND +YQ T  TK+ E  LR+ I    S++VN VNN  YQVIDG +Q+ + L  + CSC  WD L+I C H  AV T KH
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKH

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]5.2e-2346.21Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN
        MLEV+RM+LQRWF+ERKN  D+Q T  TKS E +LRE I++G +M V  VNN +YQVID   Q                               KHL   
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN

Query:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP
        GYVS +YSN+ LR TYSG +HP+G++ SW+IP
Subjt:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]6.6e-1841.67Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN
        MLEV+RM+LQRWF++R+NDVD+Q T  TKSAE +L E I+   +M+V  VNN +YQ                                      KHL   
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN

Query:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP
        GYVS +YSN+ L  TYSG +HP+G++ SW+IP
Subjt:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]9.2e-2043.41Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN
        +L+ IR +LQ WF+E+          LT  AE ELRE  N   S +V+ +NN  Y+VIDG N   V+L  + CSC  WD ++I C HA AV+   +L I 
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN

Query:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSW
         +V  +Y  STL  TY G V+PIGN   W
Subjt:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSW

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]2.6e-2242.64Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN
        +L+ IR LLQ WF+ER        T LT  AE ELR+  N   + +V+ +NN  Y+V+DG N + V++I++ CSCC WD  +I C HA AVL+  +L   
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN

Query:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSW
         +VS +Y ++T   TY   +HPIGN   W
Subjt:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSW

TrEMBL top hitse value%identityAlignment
A0A1S3CNA2 uncharacterized protein LOC1035028414.2e-1853.12Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKH
        MLE +RM+LQRWFFE +ND +YQ T  TK+ E  LR+ I    S++VN VNN  YQVIDG +Q+ + L  + CSC  WD L+I C H  AV T KH
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKH

A0A5D3CGP0 SWIM-type domain-containing protein4.2e-1853.12Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKH
        MLE +RM+LQRWFFE +ND +YQ T  TK+ E  LR+ I    S++VN VNN  YQVIDG +Q+ + L  + CSC  WD L+I C H  AV T KH
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKH

A0A5D3DJR8 MuDR family transposase2.7e-1740.62Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN
        +L+ IR +LQ WF++R+       T LT  AE ELR    N  S  VN +N+  +QVIDG  Q  V L  + C+C  WD  +I C HA AVL  ++++  
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN

Query:  GYVSPFYSNSTLRCTYSGIVHPIGNEGS
         +VS ++ +STL  TY+G V P+GN  +
Subjt:  GYVSPFYSNSTLRCTYSGIVHPIGNEGS

A0A6J1C328 uncharacterized protein LOC1110069942.5e-2346.21Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN
        MLEV+RM+LQRWF+ERKN  D+Q T  TKS E +LRE I++G +M V  VNN +YQVID   Q                               KHL   
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN

Query:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP
        GYVS +YSN+ LR TYSG +HP+G++ SW+IP
Subjt:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP

A0A6J1DNQ8 uncharacterized protein LOC1110223473.2e-1841.67Show/hide
Query:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN
        MLEV+RM+LQRWF++R+NDVD+Q T  TKSAE +L E I+   +M+V  VNN +YQ                                      KHL   
Subjt:  MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSIN

Query:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP
        GYVS +YSN+ L  TYSG +HP+G++ SW+IP
Subjt:  GYVSPFYSNSTLRCTYSGIVHPIGNEGSWDIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGTCATTCGGATGTTATTGCAAAGGTGGTTTTTTGAACGTAAGAACGATGTTGACTATCAAGCTACCTATCTGACAAAGTCCGCTGAATTAGAATTG
CGTGAAATGATCAACAATGGACACTCAATGCAGGTCAATCTAGTAAACAACCATTTGTACCAAGTAATTGATGGTTCGAATCAACATGATGTGGATCTAATCAAT
AGAAGATGTTCTTGTTGCAAATGGGACCAACTACAAATCCTTTGTTTTCATGCATTTGCTGTCTTAACTCGTAAGCACTTATCGATAAATGGTTACGTGTCCCCA
TTTTATTCCAACAGTACTTTGCGTTGCACATACTCTGGGATAGTCCATCCTATTGGAAATGAAGGTAGTTGGGATATACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGTCATTCGGATGTTATTGCAAAGGTGGTTTTTTGAACGTAAGAACGATGTTGACTATCAAGCTACCTATCTGACAAAGTCCGCTGAATTAGAATTG
CGTGAAATGATCAACAATGGACACTCAATGCAGGTCAATCTAGTAAACAACCATTTGTACCAAGTAATTGATGGTTCGAATCAACATGATGTGGATCTAATCAAT
AGAAGATGTTCTTGTTGCAAATGGGACCAACTACAAATCCTTTGTTTTCATGCATTTGCTGTCTTAACTCGTAAGCACTTATCGATAAATGGTTACGTGTCCCCA
TTTTATTCCAACAGTACTTTGCGTTGCACATACTCTGGGATAGTCCATCCTATTGGAAATGAAGGTAGTTGGGATATACCATAG
Protein sequenceShow/hide protein sequence
MLEVIRMLLQRWFFERKNDVDYQATYLTKSAELELREMINNGHSMQVNLVNNHLYQVIDGSNQHDVDLINRRCSCCKWDQLQILCFHAFAVLTRKHLSINGYVSP
FYSNSTLRCTYSGIVHPIGNEGSWDIP