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Lcy09g016400 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g016400
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionATP-dependent DNA helicase
Genome locationChr09:28834548..28852891
RNA-Seq ExpressionLcy09g016400
SyntenyLcy09g016400
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR010285 - DNA helicase Pif1-like
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454685.1 PREDICTED: ATP-dependent DNA helicase PIF1-like [Cucumis melo]3.8e-2664.58Show/hide
Query:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKKA
        T R+KGMIA AT T GVA +I+ GGRTAH RFNIPL+  E+SMC ISKQS++A+L+R+ ++IIWDE PMAK++ +E+V+RT RDIMD L PFG KA
Subjt:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKKA

XP_008465451.1 PREDICTED: ATP-dependent DNA helicase PIF4-like, partial [Cucumis melo]6.9e-2868.42Show/hide
Query:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        T R+KGMIALAT TSGVAA+I+SGGRTAHSRFNIPL+  E+SMC I KQS++A+L+R+A++IIWDE P+AK++ +E+VDRT RDIMD   PFG K
Subjt:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

XP_019242534.1 PREDICTED: uncharacterized protein LOC109222664, partial [Nicotiana attenuata]3.4e-2768.82Show/hide
Query:  RAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        R++GM+ALATTTSGVAA I+ GGRTAHSRF+IPLQTT++++  +SKQS  A+L+R+A++IIWDE PMAKR  +ETVDR+FRDIMD+ EPFG K
Subjt:  RAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

XP_022155233.1 ATP-dependent DNA helicase PIF1-like [Momordica charantia]4.9e-2670.79Show/hide
Query:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        MIA+AT TSGVAA IM GGRTAHSRFNIPLQ  ESSMC ISKQS++AEL+R+A++IIWDE P AK+  +E VDRTF+DIM++ +PFG K
Subjt:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

XP_022156991.1 uncharacterized protein LOC111023820 [Momordica charantia]5.8e-2770.79Show/hide
Query:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        MIALATTTSGV+A+++ GGRTAHSRFNIPLQ T+S+MC ISKQS + ELL++AR+IIWDE PMAKR+ +E++DR+FRDIMD  +PFG K
Subjt:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

TrEMBL top hitse value%identityAlignment
A0A1S3BZY9 ATP-dependent DNA helicase1.8e-2664.58Show/hide
Query:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKKA
        T R+KGMIA AT T GVA +I+ GGRTAH RFNIPL+  E+SMC ISKQS++A+L+R+ ++IIWDE PMAK++ +E+V+RT RDIMD L PFG KA
Subjt:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKKA

A0A1S3CQE3 ATP-dependent DNA helicase3.3e-2868.42Show/hide
Query:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        T R+KGMIALAT TSGVAA+I+SGGRTAHSRFNIPL+  E+SMC I KQS++A+L+R+A++IIWDE P+AK++ +E+VDRT RDIMD   PFG K
Subjt:  TTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

A0A1S4CBN9 ATP-dependent DNA helicase4.1e-2665.62Show/hide
Query:  VTTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        V  R++ MIALATTTSGVA  I+ GGRTAHS+F+IPLQTT++++  +SKQS  A+L+R+A++IIWDE PMAKR  +ETVDR+FRDIMD+ EPFG K
Subjt:  VTTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

A0A6J1DMF2 ATP-dependent DNA helicase2.4e-2670.79Show/hide
Query:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        MIA+AT TSGVAA IM GGRTAHSRFNIPLQ  ESSMC ISKQS++AEL+R+A++IIWDE P AK+  +E VDRTF+DIM++ +PFG K
Subjt:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

A0A6J1DWM7 ATP-dependent DNA helicase2.8e-2770.79Show/hide
Query:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
        MIALATTTSGV+A+++ GGRTAHSRFNIPLQ T+S+MC ISKQS + ELL++AR+IIWDE PMAKR+ +E++DR+FRDIMD  +PFG K
Subjt:  MIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGTGACAAGCAAAAAACCTGTAACAACAAGAGCAAAGGGAATGATTGCATTAGCAACTACAACATCAGGTGTTGCTGCTACAATAATGTCAGGAGGT
CGAACAGCACATTCACGATTCAACATACCATTGCAAACAACAGAGTCATCTATGTGTGTCATATCCAAACAAAGTAGTAAGGCTGAATTGCTAAGAAGGGCAAGG
ATTATTATATGGGATGAAACACCAATGGCAAAGAGGTTTGTACTTGAAACAGTTGATAGAACATTTAGAGATATAATGGATAGTTTAGAACCATTTGGCAAAAAG
GCCCGCTTCAGCACAATTGGGTCTCTTCACCTCCTCCTCGTCCAAGACATCGAGATGGCTCCAAAAACTCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAGTGACAAGCAAAAAACCTGTAACAACAAGAGCAAAGGGAATGATTGCATTAGCAACTACAACATCAGGTGTTGCTGCTACAATAATGTCAGGAGGT
CGAACAGCACATTCACGATTCAACATACCATTGCAAACAACAGAGTCATCTATGTGTGTCATATCCAAACAAAGTAGTAAGGCTGAATTGCTAAGAAGGGCAAGG
ATTATTATATGGGATGAAACACCAATGGCAAAGAGGTTTGTACTTGAAACAGTTGATAGAACATTTAGAGATATAATGGATAGTTTAGAACCATTTGGCAAAAAG
GCCCGCTTCAGCACAATTGGGTCTCTTCACCTCCTCCTCGTCCAAGACATCGAGATGGCTCCAAAAACTCCGTAA
Protein sequenceShow/hide protein sequence
MGRVTSKKPVTTRAKGMIALATTTSGVAATIMSGGRTAHSRFNIPLQTTESSMCVISKQSSKAELLRRARIIIWDETPMAKRFVLETVDRTFRDIMDSLEPFGKK
ARFSTIGSLHLLLVQDIEMAPKTP