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Lcy09g016530 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g016530
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr09:29510846..29513361
RNA-Seq ExpressionLcy09g016530
SyntenyLcy09g016530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONK66393.1 uncharacterized protein A4U43_C06F7380 [Asparagus officinalis]1.6e-0943.75Show/hide
Query:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRD
        ALK M   K+PG DG  A F+++YWD IG++V    V  EK +++  L+G++++    +YLGL   T +NK EMFKRL +
Subjt:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRD

VFQ85560.1 unnamed protein product [Cuscuta campestris]3.2e-1040Show/hide
Query:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS-----SKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFS
        +L DM P KAPG DG HA FYQK W ++G  V      SK+V +E+A +I+ L+GI     +G+YLG++       N +F  + D +   L+GWK  L +
Subjt:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS-----SKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFS

XP_021763810.1 uncharacterized protein LOC110728475 [Chenopodium quinoa]7.7e-1228.25Show/hide
Query:  MALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS----------------------------------------SKNVDSEKAKDISALIGIQILDSIGQ
        +AL DM+P KAPG+DG H  F+QK+W II ++V                                         SKNV   + ++I  L+G++ +D   +
Subjt:  MALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS----------------------------------------SKNVDSEKAKDISALIGIQILDSIGQ

Query:  YLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLGD---VVPAFGGGLQTILEGLIGLVGRICSELR--VKRAW
        YLG+     ++K  +F  L+D +WK +QGWK  L S      ++ A    + T L G+  +  R+  E+   + R W
Subjt:  YLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLGD---VVPAFGGGLQTILEGLIGLVGRICSELR--VKRAW

XP_021840305.1 uncharacterized protein LOC110780188 [Spinacia oleracea]6.5e-1130.97Show/hide
Query:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEV------------------------------SSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERN
        A+  M+P KAPG DG HA F+QK+WD+IG +V                               SK V +E+ K+I   +G++ +    +YLGL     R+
Subjt:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEV------------------------------SSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERN

Query:  KNEMFKRLRDSVWKILQGWKGNLFS----------LGDVVPAFGGGLQTILEGLI
        K  +F  L++ +WK LQGWK  L S          +   +P +   +  IL+ LI
Subjt:  KNEMFKRLRDSVWKILQGWKGNLFS----------LGDVVPAFGGGLQTILEGLI

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]4.0e-0846.97Show/hide
Query:  VSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLG
        + SKN   +    I   + +   +S+GQYLGL  QT RNK ++F  ++D VWK LQGWKG LFS+G
Subjt:  VSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLG

TrEMBL top hitse value%identityAlignment
A0A484M9N3 Uncharacterized protein1.6e-1040Show/hide
Query:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS-----SKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFS
        +L DM P KAPG DG HA FYQK W ++G  V      SK+V +E+A +I+ L+GI     +G+YLG++       N +F  + D +   L+GWK  L +
Subjt:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS-----SKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFS

A0A5P1EL44 Uncharacterized protein7.8e-1043.75Show/hide
Query:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRD
        ALK M   K+PG DG  A F+++YWD IG++V    V  EK +++  L+G++++    +YLGL   T +NK EMFKRL +
Subjt:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRD

A0A6J1DUG8 uncharacterized protein LOC1110241351.9e-0846.97Show/hide
Query:  VSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLG
        + SKN   +    I   + +   +S+GQYLGL  QT RNK ++F  ++D VWK LQGWKG LFS+G
Subjt:  VSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLG

A0A7N2RB16 CCHC-type domain-containing protein1.1e-0828.19Show/hide
Query:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS--------------------------------------------------SKNVDSEKAKDISALIG
        AL+ M P KAPG DG    FYQK+W+ IGD+VS                                                  SK V  EK +DI + +G
Subjt:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVS--------------------------------------------------SKNVDSEKAKDISALIG

Query:  IQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFS-------LGDVVPAFGGGLQTILEGLIGLVGRICSELRVKRAW
        +  +    +YLGL     RNK      +++ VW  LQGWK  L S       L  VV A      +  +  +GL   I  E+++++ W
Subjt:  IQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFS-------LGDVVPAFGGGLQTILEGLIGLVGRICSELRVKRAW

A0A803QJM9 Uncharacterized protein1.3e-0933.09Show/hide
Query:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEV--------------------------------SSKNVDS------EKAKD-ISALIGIQILDSIGQYL
        ALK +NP K+PGSDG  A FY +YW I+GD V                                +SK+V S      + AK+    ++G+ I +   +YL
Subjt:  ALKDMNPGKAPGSDGAHARFYQKYWDIIGDEV--------------------------------SSKNVDS------EKAKD-ISALIGIQILDSIGQYL

Query:  GLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLG
        GL   +ER+K EMF  +++ +W+ L  W   LFS+G
Subjt:  GLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTAAAAGATATGAACCCTGGAAAAGCCCCAGGTTCGGATGGGGCCCACGCTCGTTTCTACCAAAAGTATTGGGATATTATAGGTGATGAGGTTTCGAGCAAGAA
TGTAGACTCTGAAAAAGCTAAGGATATCAGCGCGCTAATAGGAATCCAAATCTTAGATTCTATAGGCCAATATCTTGGGTTGTCGATGCAAACAGAGAGAAACAAGAACG
AGATGTTTAAAAGACTTAGAGATAGTGTTTGGAAAATTCTGCAAGGTTGGAAAGGTAACCTCTTCTCATTGGGAGATGTTGTGCCCGCTTTTGGTGGGGGTCTTCAGACA
ATTTTAGAAGGGCTCATTGGCTTAGTTGGAAGAATATGTTCTGAATTAAGAGTAAAGAGGGCATGGGCTTTAGGGATTTGCATCTTTTCAACAAGGCAATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTAAAAGATATGAACCCTGGAAAAGCCCCAGGTTCGGATGGGGCCCACGCTCGTTTCTACCAAAAGTATTGGGATATTATAGGTGATGAGGTTTCGAGCAAGAA
TGTAGACTCTGAAAAAGCTAAGGATATCAGCGCGCTAATAGGAATCCAAATCTTAGATTCTATAGGCCAATATCTTGGGTTGTCGATGCAAACAGAGAGAAACAAGAACG
AGATGTTTAAAAGACTTAGAGATAGTGTTTGGAAAATTCTGCAAGGTTGGAAAGGTAACCTCTTCTCATTGGGAGATGTTGTGCCCGCTTTTGGTGGGGGTCTTCAGACA
ATTTTAGAAGGGCTCATTGGCTTAGTTGGAAGAATATGTTCTGAATTAAGAGTAAAGAGGGCATGGGCTTTAGGGATTTGCATCTTTTCAACAAGGCAATGCTAG
Protein sequenceShow/hide protein sequence
MALKDMNPGKAPGSDGAHARFYQKYWDIIGDEVSSKNVDSEKAKDISALIGIQILDSIGQYLGLSMQTERNKNEMFKRLRDSVWKILQGWKGNLFSLGDVVPAFGGGLQT
ILEGLIGLVGRICSELRVKRAWALGICIFSTRQC