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Lcy09g016800 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g016800
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr09:30605090..30605626
RNA-Seq ExpressionLcy09g016800
SyntenyLcy09g016800
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.5e-2557.14Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW
        MA RLGNAIG FEDV+S      WG  LRVRVR D+ +PL RG+K+NLDGPM G WIPI+YERLP+F   CG + HI +DC D      + S   QYG W
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW

Query:  LRYGG
        LR+ G
Subjt:  LRYGG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]8.9e-1847.57Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKI-NLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGE
        MA  LG  +G  E+++      + G  +RVRV+ID+S+PLRRG+K+ N DG     W P+RYE+LP+FC  CG IGH  R+C    K  T N S  QYG+
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKI-NLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGE

Query:  WLR
        WLR
Subjt:  WLR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.5e-3054.62Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSA-PQYGE
        MA RLGNAIG+F DVD       WG +LR+RV IDI++PLRRG+KIN+DGPM G WIPI+YERLP+FC FCG+IGH S DC   Y     +S A  +YG 
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSA-PQYGE

Query:  WLRYGG--RGDMIARSSAKDLRLDSSAPSS
        WLR+ G   G    R      R DS   SS
Subjt:  WLRYGG--RGDMIARSSAKDLRLDSSAPSS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.2e-2338.92Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW
        MA RLGNA+G FE+ D  +    WG  LRVRV +DIS+PLRRG+K+NLDGP+ G+WIPI+YERLP+FC  CG+               +++    QYG W
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW

Query:  LRYGG------------RGDMIARSSAKDLRLDSSAPSSPVNQLLSQSPVAMDIGTSNDSPLL-TPR
        LRY G            + D++ +S        S++P    +Q +  +P    I    +SP+  TP+
Subjt:  LRYGG------------RGDMIARSSAKDLRLDSSAPSSPVNQLLSQSPVAMDIGTSNDSPLL-TPR

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.6e-1743.81Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSS---APQY
        + E +GNA+G F D+D ++    WG T+R+RV +D+ +PLRRG+K+ L       W+  +YERLP +C FCG +GH  R+C D  K ++A+ S   + QY
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSS---APQY

Query:  GEWLR
        G WLR
Subjt:  GEWLR

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054817.3e-2657.14Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW
        MA RLGNAIG FEDV+S      WG  LRVRVR D+ +PL RG+K+NLDGPM G WIPI+YERLP+F   CG + HI +DC D      + S   QYG W
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW

Query:  LRYGG
        LR+ G
Subjt:  LRYGG

A0A6J1D765 uncharacterized protein LOC1110179024.3e-1847.57Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKI-NLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGE
        MA  LG  +G  E+++      + G  +RVRV+ID+S+PLRRG+K+ N DG     W P+RYE+LP+FC  CG IGH  R+C    K  T N S  QYG+
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKI-NLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGE

Query:  WLR
        WLR
Subjt:  WLR

A0A6J1DU55 uncharacterized protein LOC1110231351.7e-3054.62Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSA-PQYGE
        MA RLGNAIG+F DVD       WG +LR+RV IDI++PLRRG+KIN+DGPM G WIPI+YERLP+FC FCG+IGH S DC   Y     +S A  +YG 
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSA-PQYGE

Query:  WLRYGG--RGDMIARSSAKDLRLDSSAPSS
        WLR+ G   G    R      R DS   SS
Subjt:  WLRYGG--RGDMIARSSAKDLRLDSSAPSS

A0A6J1DX30 uncharacterized protein LOC1110248744.5e-2338.92Show/hide
Query:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW
        MA RLGNA+G FE+ D  +    WG  LRVRV +DIS+PLRRG+K+NLDGP+ G+WIPI+YERLP+FC  CG+               +++    QYG W
Subjt:  MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEW

Query:  LRYGG------------RGDMIARSSAKDLRLDSSAPSSPVNQLLSQSPVAMDIGTSNDSPLL-TPR
        LRY G            + D++ +S        S++P    +Q +  +P    I    +SP+  TP+
Subjt:  LRYGG------------RGDMIARSSAKDLRLDSSAPSSPVNQLLSQSPVAMDIGTSNDSPLL-TPR

A0A7N2L6E7 CCHC-type domain-containing protein4.0e-1640.34Show/hide
Query:  LGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVK-INLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEWLRY
        +GN++G F ++D ++C     + +R+RV + I +PLRRG   ++LDG  F  W+  +YERLP FC  CG +GH  + C DF  +    S+  QYGEWL+ 
Subjt:  LGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVK-INLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEWLRY

Query:  GG--RGDMI-ARSSAKDLR
        GG  +G+    RS+++D R
Subjt:  GG--RGDMI-ARSSAKDLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAACGATTGGGCAACGCAATTGGATCGTTTGAGGATGTGGATAGCAAAAATTGTTTCCATTTTTGGGGAGTGACTCTTCGTGTAAGAGTTCGCATTGACATTTC
ACGTCCACTTAGGCGAGGAGTCAAGATCAATCTGGACGGCCCAATGTTCGGTAGCTGGATTCCTATTCGGTATGAGCGTTTACCAGAATTTTGCTCATTTTGTGGCATTA
TTGGCCATATATCAAGGGATTGTGGAGATTTTTACAAATTTACTACAGCCAATAGCTCAGCCCCTCAGTATGGAGAATGGTTACGTTACGGAGGAAGGGGGGATATGATT
GCTCGGTCGTCGGCGAAGGATTTAAGGCTCGACTCCAGTGCTCCTTCTTCTCCGGTGAATCAACTACTATCTCAATCCCCTGTGGCTATGGATATCGGAACGTCTAACGA
CTCCCCTTTACTCACGCCACGAGGTTTCAGTCGATCAGGATTTTCTTTGACTGACAGAAGAAAGAGCTTCCCAGAATCTTCTCAACCGGCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAACGATTGGGCAACGCAATTGGATCGTTTGAGGATGTGGATAGCAAAAATTGTTTCCATTTTTGGGGAGTGACTCTTCGTGTAAGAGTTCGCATTGACATTTC
ACGTCCACTTAGGCGAGGAGTCAAGATCAATCTGGACGGCCCAATGTTCGGTAGCTGGATTCCTATTCGGTATGAGCGTTTACCAGAATTTTGCTCATTTTGTGGCATTA
TTGGCCATATATCAAGGGATTGTGGAGATTTTTACAAATTTACTACAGCCAATAGCTCAGCCCCTCAGTATGGAGAATGGTTACGTTACGGAGGAAGGGGGGATATGATT
GCTCGGTCGTCGGCGAAGGATTTAAGGCTCGACTCCAGTGCTCCTTCTTCTCCGGTGAATCAACTACTATCTCAATCCCCTGTGGCTATGGATATCGGAACGTCTAACGA
CTCCCCTTTACTCACGCCACGAGGTTTCAGTCGATCAGGATTTTCTTTGACTGACAGAAGAAAGAGCTTCCCAGAATCTTCTCAACCGGCATTTTAA
Protein sequenceShow/hide protein sequence
MAERLGNAIGSFEDVDSKNCFHFWGVTLRVRVRIDISRPLRRGVKINLDGPMFGSWIPIRYERLPEFCSFCGIIGHISRDCGDFYKFTTANSSAPQYGEWLRYGGRGDMI
ARSSAKDLRLDSSAPSSPVNQLLSQSPVAMDIGTSNDSPLLTPRGFSRSGFSLTDRRKSFPESSQPAF