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Lcy09g016830 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g016830
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRAB6-interacting golgin
Genome locationChr09:30882419..30882652
RNA-Seq ExpressionLcy09g016830
SyntenyLcy09g016830
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5561548.1 hypothetical protein DKX38_006505 [Salix brachista]1.3e-1367.61Show/hide
Query:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        MKNSG+IS++  +   L+R+D+ EE+SRSA A+FRAKEE+IE+KKME+RDKV AHLGR EEA KRL EIRE
Subjt:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]2.5e-1778.08Show/hide
Query:  MKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +KNSGMISS+VN   IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE
Subjt:  MKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]1.5e-1779.17Show/hide
Query:  MKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +KNSGMISS+V N IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE
Subjt:  MKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]2.7e-1984.51Show/hide
Query:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        ++NSGMI SHVNAIGS ++EDQ EELSRSAFALFRAKEE+IERKKMEMRDKVEA LGRAEEA KRL EIRE
Subjt:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]5.0e-1880.56Show/hide
Query:  MKNSG-MISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +KNSG MISS+VNAIGS V+EDQ EE+SRSA A+FRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE
Subjt:  MKNSG-MISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin1.2e-1778.08Show/hide
Query:  MKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +KNSGMISS+VN   IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE
Subjt:  MKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

A0A1S3CFV6 RAB6-interacting golgin7.1e-1879.17Show/hide
Query:  MKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +KNSGMISS+V N IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE
Subjt:  MKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

A0A5D3CH78 RAB6-interacting golgin7.1e-1879.17Show/hide
Query:  MKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +KNSGMISS+V N IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE
Subjt:  MKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

A0A5N5N3I5 RAB6-interacting golgin6.2e-1467.61Show/hide
Query:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        MKNSG+IS++  +   L+R+D+ EE+SRSA A+FRAKEE+IE+KKME+RDKV AHLGR EEA KRL EIRE
Subjt:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

A0A6J1CNF1 RAB6-interacting golgin1.3e-1984.51Show/hide
Query:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        ++NSGMI SHVNAIGS ++EDQ EELSRSAFALFRAKEE+IERKKMEMRDKVEA LGRAEEA KRL EIRE
Subjt:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)2.6e-1256.34Show/hide
Query:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +K+SG IS +    GS + +++ EELS+SAFALF+AKE++IER+KME++D+V+  LG AEEA +RL EIRE
Subjt:  MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT2G36410.1 Family of unknown function (DUF662)1.3e-0850Show/hide
Query:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        SSH++      RED  EE++RSA + FRAKE++IE+++ME+R++++A LGR E+  KRL+ IRE
Subjt:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT2G36410.2 Family of unknown function (DUF662)1.3e-0850Show/hide
Query:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        SSH++      RED  EE++RSA + FRAKE++IE+++ME+R++++A LGR E+  KRL+ IRE
Subjt:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT2G36410.3 Family of unknown function (DUF662)1.3e-0850Show/hide
Query:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        SSH++      RED  EE++RSA + FRAKE++IE+++ME+R++++A LGR E+  KRL+ IRE
Subjt:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT3G09980.1 Family of unknown function (DUF662)1.6e-0952.31Show/hide
Query:  ISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        +S  ++    + +ED  EE+SR+A + FRAKEE+IE+KKME+R++V+A LGR EE  KRL  IRE
Subjt:  ISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCTAGTGAGGGAGGATCAAGTCGAGGAGCTTTCGAGATCGGCATTCGCATTGTTTCGAGCCAA
GGAAGAGAAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCACCTTGGACGAGCTGAAGAAGCGATGAAGCGATTGACGGAGATTCGCGAAGTAAGTT
TGATCGAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCTAGTGAGGGAGGATCAAGTCGAGGAGCTTTCGAGATCGGCATTCGCATTGTTTCGAGCCAA
GGAAGAGAAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCACCTTGGACGAGCTGAAGAAGCGATGAAGCGATTGACGGAGATTCGCGAAGTAAGTT
TGATCGAGCATTGA
Protein sequenceShow/hide protein sequence
MKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIREVSLIEH