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Lcy09g017100 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g017100
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein
Genome locationChr09:32125582..32125878
RNA-Seq ExpressionLcy09g017100
SyntenyLcy09g017100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-1241.76Show/hide
Query:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP
        G++ +     ++ T+++I KIA     K + E +    LY +LQ+IPG+ +DD L+VA SLL D  M+  F+D+P EWKY  CM +LGR P
Subjt:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP

KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1242.86Show/hide
Query:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP
        G++ +     ++ T+++I KIA     K + E +    LY ELQ+IPG+ +DD L+VA SLL D  M+  F+D+P EWKY  CM +LGR P
Subjt:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP

KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-0437.84Show/hide
Query:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP
        ++ +     ++ T+++I KIA     K + E +    LYAELQ+IPG+ +DD L+V  SLL D  M+  F+D+P
Subjt:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]2.8e-0540Show/hide
Query:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP
        G++ +     ++ T+++I KIA     K + E +    LYAELQ+IPG+ +DD L+VA SLL D  M+  F+D+P
Subjt:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]9.0e-0437.84Show/hide
Query:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP
        ++ +     ++ T+++I KIA     K + E +    LYAELQ+IPG+ +DD L+V  SLL D  M+  F+D+P
Subjt:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992484.3e-0437.84Show/hide
Query:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP
        ++ +     ++ T+++I KIA     K + E +    LYAELQ+IPG+ +DD L+V  SLL D  M+  F+D+P
Subjt:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP

A0A5A7U7F7 Retrotransposon protein3.3e-1241.76Show/hide
Query:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP
        G++ +     ++ T+++I KIA     K + E +    LY +LQ+IPG+ +DD L+VA SLL D  M+  F+D+P EWKY  CM +LGR P
Subjt:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP

A0A5A7VG45 Retrotransposon protein1.5e-1242.86Show/hide
Query:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP
        G++ +     ++ T+++I KIA     K + E +    LY ELQ+IPG+ +DD L+VA SLL D  M+  F+D+P EWKY  CM +LGR P
Subjt:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAP

A0A5A7VGQ0 Retrotransposon protein4.3e-0437.84Show/hide
Query:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP
        ++ +     ++ T+++I KIA     K + E +    LYAELQ+IPG+ +DD L+V  SLL D  M+  F+D+P
Subjt:  NMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP

A0A5D3C7T4 Uncharacterized protein1.4e-0540Show/hide
Query:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP
        G++ +     ++ T+++I KIA     K + E +    LYAELQ+IPG+ +DD L+VA SLL D  M+  F+D+P
Subjt:  GNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACATGGCAGAGGTCTTAGAGAATGAGCTCCAACTGACTACACAACAGATTGAAAAGATTGCATTCTTGCCGACGAGGAAGGATAAGACGGAGCGAAAT
CGTCGAAATGAGTTGTATGCAGAGCTGCAGTCGATACCTGGAGTGTCTATAGACGACGACCTCATGGTCGCATGGTCACTACTTTCTGATGAGAACATGATGACC
CACTTCATAGACTTCCCTTTGGAGTGGAAGTATGATTACTGTATGGAAGTCCTTGGCAGGGCACCCAGACAGCCAAGACAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACATGGCAGAGGTCTTAGAGAATGAGCTCCAACTGACTACACAACAGATTGAAAAGATTGCATTCTTGCCGACGAGGAAGGATAAGACGGAGCGAAAT
CGTCGAAATGAGTTGTATGCAGAGCTGCAGTCGATACCTGGAGTGTCTATAGACGACGACCTCATGGTCGCATGGTCACTACTTTCTGATGAGAACATGATGACC
CACTTCATAGACTTCCCTTTGGAGTGGAAGTATGATTACTGTATGGAAGTCCTTGGCAGGGCACCCAGACAGCCAAGACAGCCATGA
Protein sequenceShow/hide protein sequence
MGNMAEVLENELQLTTQQIEKIAFLPTRKDKTERNRRNELYAELQSIPGVSIDDDLMVAWSLLSDENMMTHFIDFPLEWKYDYCMEVLGRAPRQPRQP