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Lcy09g017630 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g017630
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr09:35441851..35442532
RNA-Seq ExpressionLcy09g017630
SyntenyLcy09g017630
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8481389.1 hypothetical protein CXB51_026139 [Gossypium anomalum]1.7e-2842.6Show/hide
Query:  FEVERGI-SQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLW-PRTTLEPLLPPKIRRPPGRPKRQ
        ++VE G  SQ+ VDL E +CSCR+WDLTGIPC+HA+  I+  ++ PE +V   Y KQT + +YS F+ PV G   W P + + P+LPP +RRPPGRP + 
Subjt:  FEVERGI-SQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLW-PRTTLEPLLPPKIRRPPGRPKRQ

Query:  RRRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIARSSTRRRKDRTFMGLNIPINEIETGATT
        RR++ DE   + +     V  +CS+CK  GHN RSC+G +              G NIP+   + G  T
Subjt:  RRRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIARSSTRRRKDRTFMGLNIPINEIETGATT

PNX90576.1 sucrose-phosphate synthase-like protein, partial [Trifolium pratense]1.3e-2840.38Show/hide
Query:  MFEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQR
        +F V  GI Q  V+L EKTC+CR W+L+GIPCVHAI  +++   KPE+FV   Y K T V+ Y+  I P NG  LWP     P+ PP +RR PGRPK+ R
Subjt:  MFEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQR

Query:  RRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA----------RSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDGRQNNEGETQRNERN
        R+  DE  P   K+ I  VT C+RCK  GHN RSC+G  A          +S+T  +      G+N      +TGA +   T + G  N   +T      
Subjt:  RRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA----------RSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDGRQNNEGETQRNERN

Query:  IGTQQSTN
          +Q   N
Subjt:  IGTQQSTN

RHN71616.1 putative transcription factor interactor and regulator CCHC(Zn) family [Medicago truncatula]1.8e-3047.52Show/hide
Query:  FEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRR
        F V  G     +++ E+TCSCR W+L+GIPC HA+ +IYY  + P+E+V   Y KQT ++ Y  FI P NG  LWP   L P+LPP +RR PGRPK+ RR
Subjt:  FEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRR

Query:  RDVDE--VAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA
        +D DE     S K +  Q   +C+RCK  GHN R+C+G  A
Subjt:  RDVDE--VAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA

XP_031397476.1 uncharacterized protein LOC116208272 [Punica granatum]4.4e-2940.83Show/hide
Query:  SQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVA
        S+  VDL   TCSCR WDL GIPC+HA+  I +   KPE+FVH  Y + T   +Y +FIKP  G   W ++  +P+ PPK++RPPGRPK+QR++  +E  
Subjt:  SQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVA

Query:  PSHKKQHIQVVTKCSRCKGTGHNARSCRGP-IARSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDG
          +K +       C +C G+ HN R+C+GP IA SS ++ K+ +     +PI    T A+ D      G
Subjt:  PSHKKQHIQVVTKCSRCKGTGHNARSCRGP-IARSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDG

XP_039690759.1 uncharacterized protein LOC120580713 [Medicago truncatula]4.4e-2939.49Show/hide
Query:  MFEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQR
        MF V  G     V+L +KTC+CR WDL+GIPC HAI  IYY +   +++V   Y KQ  ++ Y + I P NG  LWP    EP+LPP  RR PGRPK+ R
Subjt:  MFEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQR

Query:  RRDVDEVAPSHKK-QHIQVVTKCSRCKGTGHNARSCRGPIARSSTRRRKDRTFMGLNIPI---NEIETGATTDAMTLEDGRQNNEGETQRNERNI
        R++ DE   + KK +  QV  +C RCK  GHN R+C G            +T     IP+    +I T +    +  + G+ NN    Q N  N+
Subjt:  RRDVDEVAPSHKK-QHIQVVTKCSRCKGTGHNARSCRGPIARSSTRRRKDRTFMGLNIPI---NEIETGATTDAMTLEDGRQNNEGETQRNERNI

TrEMBL top hitse value%identityAlignment
A0A1S3U0L5 uncharacterized protein LOC1067606513.0e-2846.72Show/hide
Query:  FEVERGISQNK--VDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQ
        FEV  G + +K  VD++  +CSC  WDL GIPC HA+ +I+Y  + PE++VH  Y K+     Y+  I P+NG  LWPR+  EPLLPP  + PPGRPK+ 
Subjt:  FEVERGISQNK--VDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQ

Query:  RRRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCR
        RRR+ DE     K     +  KCS C   GHN RSC+
Subjt:  RRRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCR

A0A1S3U0L8 uncharacterized protein LOC1067606572.3e-2846.72Show/hide
Query:  FEVERGISQNK--VDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQ
        FEV  G + +K  VD++  +CSC  W+L GIPC HA+ +I+Y  + PE++VH  Y KQ     Y+  I P+NG  LWPR+  EPLLPP  ++PPGRPK+ 
Subjt:  FEVERGISQNK--VDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQ

Query:  RRRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCR
        RRR+ DE     K     +  KCS C   GHN RSC+
Subjt:  RRRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCR

A0A2K3MIG9 Sucrose-phosphate synthase-like protein (Fragment)6.1e-2940.38Show/hide
Query:  MFEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQR
        +F V  GI Q  V+L EKTC+CR W+L+GIPCVHAI  +++   KPE+FV   Y K T V+ Y+  I P NG  LWP     P+ PP +RR PGRPK+ R
Subjt:  MFEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQR

Query:  RRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA----------RSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDGRQNNEGETQRNERN
        R+  DE  P   K+ I  VT C+RCK  GHN RSC+G  A          +S+T  +      G+N      +TGA +   T + G  N   +T      
Subjt:  RRDVDEVAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA----------RSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDGRQNNEGETQRNERN

Query:  IGTQQSTN
          +Q   N
Subjt:  IGTQQSTN

A0A396J0S1 Putative transcription factor interactor and regulator CCHC(Zn) family8.6e-3147.52Show/hide
Query:  FEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRR
        F V  G     +++ E+TCSCR W+L+GIPC HA+ +IYY  + P+E+V   Y KQT ++ Y  FI P NG  LWP   L P+LPP +RR PGRPK+ RR
Subjt:  FEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRR

Query:  RDVDE--VAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA
        +D DE     S K +  Q   +C+RCK  GHN R+C+G  A
Subjt:  RDVDE--VAPSHKKQHIQVVTKCSRCKGTGHNARSCRGPIA

A0A6P8DW92 uncharacterized protein LOC1162082722.1e-2940.83Show/hide
Query:  SQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVA
        S+  VDL   TCSCR WDL GIPC+HA+  I +   KPE+FVH  Y + T   +Y +FIKP  G   W ++  +P+ PPK++RPPGRPK+QR++  +E  
Subjt:  SQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVA

Query:  PSHKKQHIQVVTKCSRCKGTGHNARSCRGP-IARSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDG
          +K +       C +C G+ HN R+C+GP IA SS ++ K+ +     +PI    T A+ D      G
Subjt:  PSHKKQHIQVVTKCSRCKGTGHNARSCRGP-IARSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase1.6e-0531.71Show/hide
Query:  VDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEP-LLPPKIRRPP
        V LN  TC+CR +     PC+HA+     LK  P ++V + Y  +     Y+    PV     WP     P L PP  +  P
Subjt:  VDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEP-LLPPKIRRPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTTGAGGTAGAGAGGGGTATTTCACAAAATAAGGTGGACTTGAATGAAAAAACGTGTAGTTGTAGATCATGGGATTTAACAGGCATACCATGTGTTCATGCTAT
ACAAAGTATATATTATCTTAAAAAAAAACCTGAGGAGTTTGTACACAAGTCTTACCATAAGCAGACATTGGTGAATGTTTACTCCTACTTCATCAAACCGGTCAATGGTC
ACCCTTTATGGCCAAGAACCACATTAGAACCGCTGCTACCACCTAAGATTCGGAGGCCCCCTGGCAGGCCGAAGAGGCAGAGAAGAAGAGATGTTGATGAAGTTGCACCG
TCACATAAGAAGCAACACATTCAAGTTGTTACTAAGTGTAGTCGATGTAAAGGTACAGGACATAATGCCAGATCTTGTAGGGGGCCAATAGCACGAAGTTCAACAAGGCG
TAGGAAAGATAGAACCTTCATGGGATTGAACATTCCTATTAATGAGATTGAAACTGGAGCTACTACTGACGCAATGACACTTGAAGATGGTAGACAAAACAATGAAGGTG
AAACACAGAGGAACGAAAGAAATATTGGAACCCAACAATCTACAAATCAACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTTTGAGGTAGAGAGGGGTATTTCACAAAATAAGGTGGACTTGAATGAAAAAACGTGTAGTTGTAGATCATGGGATTTAACAGGCATACCATGTGTTCATGCTAT
ACAAAGTATATATTATCTTAAAAAAAAACCTGAGGAGTTTGTACACAAGTCTTACCATAAGCAGACATTGGTGAATGTTTACTCCTACTTCATCAAACCGGTCAATGGTC
ACCCTTTATGGCCAAGAACCACATTAGAACCGCTGCTACCACCTAAGATTCGGAGGCCCCCTGGCAGGCCGAAGAGGCAGAGAAGAAGAGATGTTGATGAAGTTGCACCG
TCACATAAGAAGCAACACATTCAAGTTGTTACTAAGTGTAGTCGATGTAAAGGTACAGGACATAATGCCAGATCTTGTAGGGGGCCAATAGCACGAAGTTCAACAAGGCG
TAGGAAAGATAGAACCTTCATGGGATTGAACATTCCTATTAATGAGATTGAAACTGGAGCTACTACTGACGCAATGACACTTGAAGATGGTAGACAAAACAATGAAGGTG
AAACACAGAGGAACGAAAGAAATATTGGAACCCAACAATCTACAAATCAACCATAG
Protein sequenceShow/hide protein sequence
MMFEVERGISQNKVDLNEKTCSCRSWDLTGIPCVHAIQSIYYLKKKPEEFVHKSYHKQTLVNVYSYFIKPVNGHPLWPRTTLEPLLPPKIRRPPGRPKRQRRRDVDEVAP
SHKKQHIQVVTKCSRCKGTGHNARSCRGPIARSSTRRRKDRTFMGLNIPINEIETGATTDAMTLEDGRQNNEGETQRNERNIGTQQSTNQP