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Lcy09g017930 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g017930
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationChr09:38053038..38053567
RNA-Seq ExpressionLcy09g017930
SyntenyLcy09g017930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW44475.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.2e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

RVW96389.1 LINE-1 reverse transcriptase-like [Vitis vinifera]4.2e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

RVX05297.1 LINE-1 reverse transcriptase-like [Vitis vinifera]4.2e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

RVX06004.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.2e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

XP_030497549.1 uncharacterized protein LOC115713206 [Cannabis sativa]3.2e-0845.76Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKA
        M  +K+P PDGM + +++ YWN++ S ++E+ Q+FFQ+G   +  N TYICLIPK++ A
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKA

TrEMBL top hitse value%identityAlignment
A0A438E9N3 Transposon TX1 uncharacterized 149 kDa protein2.0e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

A0A438II49 LINE-1 reverse transcriptase-like2.0e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

A0A438J8M6 LINE-1 reverse transcriptase-like2.0e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

A0A438JAL5 LINE-1 retrotransposable element ORF2 protein2.0e-0844Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG
        MG  K+P PDG +  +W+  W+ +K  +VEMF+EFF++G F KS N T++ LIPKK  A        R ++L GG
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGG

A0A803PHZ0 Uncharacterized protein1.5e-0845.76Show/hide
Query:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKA
        M  +K+P PDGM + +++ YWN++ S ++E+ Q+FFQ+G   +  N TYICLIPK++ A
Subjt:  MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACATGAAATCCCCGAGCCCGGATGGCATGACGGAGGAATATTGGAAAAATTATTGGAACATTTTGAAGTCAAATATAGTAGAGATGTTCCAAGAATTT
TTCCAAAATGGCATTTTTAATAAAAGCACTAATAAGACATACATTTGCCTTATCCCTAAGAAGAAGAAAGCATCCAAAACGGCATCCTTACTTGAAAGGGTTTTG
GCATTAAGTGGAGGAGATGGATCAAAGGATGCCTTAGAAGCACAAACTTCTCGATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACATGAAATCCCCGAGCCCGGATGGCATGACGGAGGAATATTGGAAAAATTATTGGAACATTTTGAAGTCAAATATAGTAGAGATGTTCCAAGAATTT
TTCCAAAATGGCATTTTTAATAAAAGCACTAATAAGACATACATTTGCCTTATCCCTAAGAAGAAGAAAGCATCCAAAACGGCATCCTTACTTGAAAGGGTTTTG
GCATTAAGTGGAGGAGATGGATCAAAGGATGCCTTAGAAGCACAAACTTCTCGATTATAA
Protein sequenceShow/hide protein sequence
MGNMKSPSPDGMTEEYWKNYWNILKSNIVEMFQEFFQNGIFNKSTNKTYICLIPKKKKASKTASLLERVLALSGGDGSKDALEAQTSRL