; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g018140 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g018140
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein
Genome locationChr09:38983382..38984105
RNA-Seq ExpressionLcy09g018140
SyntenyLcy09g018140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-2639.73Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDV---
        M GP CSGF WNDE KCIVAEKEVFD W  SH +AKGLLNK F HY+EL++VFGKDRA+GG     A         D G NN  G   +   A PD    
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDV---

Query:  ---NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCI
           +LG ++  +D+  T T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+W   Q     + R  + + L A P+L+  +R  LM I
Subjt:  ---NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCI

Query:  LFADPKMTNMMLSVPPTLR
        L  +       L VP  ++
Subjt:  LFADPKMTNMMLSVPPTLR

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-2639.73Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVP---APPDV
        M GP CSGF WNDE KCIVAEKEVFD WVKSH +AKGLLNK F HY+EL++VFGKDRA+G       E   N + +D  +  +       VP    PP  
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVP---APPDV

Query:  NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFA
        + G ++  +D+  T T+R S   + S   KR RA +  ++ DI+R ++  +  Q  +IA+W   Q     + R  V   L A P+L   +R  LM IL  
Subjt:  NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFA

Query:  DPKMTNMMLSVPPTLRLRF
        +       L VP  ++  +
Subjt:  DPKMTNMMLSVPPTLRLRF

KAA0064259.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-2640.09Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG
        M GP CSGF WNDE KCIVAEKEV D WVKSH++AKGLLNK F HY+EL++VFGKDRA+GG     A         D G NN  G + + V A P     
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG

Query:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM
         D +F+ + +           S   KR R    A++ DI+R ++     Q  +IA W   Q     + R  V   L A P+L+  +R  LM IL  +   
Subjt:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM

Query:  TNMMLSVPPTLR
            L VP  ++
Subjt:  TNMMLSVPPTLR

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]2.0e-2737.98Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG
        M GP CSGF WN+  KCI  EK VFD WVK H +A+GLLNKPFP++ +L  VFG+DRA+GG C  P E +  T  D + D+     +D+ +P P  +   
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG

Query:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM
        +    ED+P TPTS     GSS+  K+ R SY  + +D  R S+     +  KIA W   +   E      +   L   P +  D+ + +   L  DP M
Subjt:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM

Query:  TNMMLSVP
         +  L  P
Subjt:  TNMMLSVP

XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]1.5e-3542.79Show/hide
Query:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLGADVEFED
        GF WND+ KCI AEKEVFD WVKSH +AKGL NKP PHY++L   FGKDRA+G     P + A +       D +F+ AQD+Y+P PP  N   D   ED
Subjt:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLGADVEFED

Query:  VPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKMTNMMLSV
        +P TPTS+P+   SS   KR R+ Y +E +D++R ++ MQ     K+A W D ++ ++  RR  V + L   P L  ++ V L+ IL  + K +   L V
Subjt:  VPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKMTNMMLSV

Query:  PPTLRLRF
        P   +  F
Subjt:  PPTLRLRF

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein1.8e-2639.73Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDV---
        M GP CSGF WNDE KCIVAEKEVFD W  SH +AKGLLNK F HY+EL++VFGKDRA+GG     A         D G NN  G   +   A PD    
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDV---

Query:  ---NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCI
           +LG ++  +D+  T T+R S   + S   KR R  +  ++ DI+R ++     Q  +IA+W   Q     + R  + + L A P+L+  +R  LM I
Subjt:  ---NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCI

Query:  LFADPKMTNMMLSVPPTLR
        L  +       L VP  ++
Subjt:  LFADPKMTNMMLSVPPTLR

A0A5A7VBC5 Retrotransposon protein8.1e-2739.73Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVP---APPDV
        M GP CSGF WNDE KCIVAEKEVFD WVKSH +AKGLLNK F HY+EL++VFGKDRA+G       E   N + +D  +  +       VP    PP  
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVP---APPDV

Query:  NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFA
        + G ++  +D+  T T+R S   + S   KR RA +  ++ DI+R ++  +  Q  +IA+W   Q     + R  V   L A P+L   +R  LM IL  
Subjt:  NLGADVEFEDVPITPTSRPSTTGS-SQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFA

Query:  DPKMTNMMLSVPPTLRLRF
        +       L VP  ++  +
Subjt:  DPKMTNMMLSVPPTLRLRF

A0A5A7VFF1 Retrotransposon protein8.1e-2740.09Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG
        M GP CSGF WNDE KCIVAEKEV D WVKSH++AKGLLNK F HY+EL++VFGKDRA+GG     A         D G NN  G + + V A P     
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG

Query:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM
         D +F+ + +           S   KR R    A++ DI+R ++     Q  +IA W   Q     + R  V   L A P+L+  +R  LM IL  +   
Subjt:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM

Query:  TNMMLSVPPTLR
            L VP  ++
Subjt:  TNMMLSVPPTLR

A0A5D3C7T4 Uncharacterized protein9.5e-2837.98Show/hide
Query:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG
        M GP CSGF WN+  KCI  EK VFD WVK H +A+GLLNKPFP++ +L  VFG+DRA+GG C  P E +  T  D + D+     +D+ +P P  +   
Subjt:  MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLG

Query:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM
        +    ED+P TPTS     GSS+  K+ R SY  + +D  R S+     +  KIA W   +   E      +   L   P +  D+ + +   L  DP M
Subjt:  ADVEFEDVPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKM

Query:  TNMMLSVP
         +  L  P
Subjt:  TNMMLSVP

A0A6J1DW73 uncharacterized protein LOC1110250187.3e-3642.79Show/hide
Query:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLGADVEFED
        GF WND+ KCI AEKEVFD WVKSH +AKGL NKP PHY++L   FGKDRA+G     P + A +       D +F+ AQD+Y+P PP  N   D   ED
Subjt:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLGADVEFED

Query:  VPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKMTNMMLSV
        +P TPTS+P+   SS   KR R+ Y +E +D++R ++ MQ     K+A W D ++ ++  RR  V + L   P L  ++ V L+ IL  + K +   L V
Subjt:  VPITPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKMTNMMLSV

Query:  PPTLRLRF
        P   +  F
Subjt:  PPTLRLRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein2.3e-0527.78Show/hide
Query:  SGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASG
        +GF W+     ++A+ ++++ ++++H  A+    K  P Y  L F+FGK+ + G
Subjt:  SGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASG

AT4G02210.1 unknown protein5.0e-0526.56Show/hide
Query:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEAD
        GF W++E + + A+  V+  ++K+H  A+  + +P P+Y++L  + G        C V  +  D
Subjt:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEAD

AT4G02210.2 unknown protein5.0e-0526.56Show/hide
Query:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEAD
        GF W++E + + A+  V+  ++K+H  A+  + +P P+Y++L  + G        C V  +  D
Subjt:  GFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGTCCGGGCTGTAGTGGCTTCTGTTGGAATGACGAGTTCAAATGCATCGTGGCTGAGAAGGAAGTTTTTGATGTGTGGGTGAAGTCGCACTCTAGTGCCAAGGG
ACTGCTGAACAAGCCATTTCCTCACTACGAGGAACTCGCTTTCGTGTTCGGAAAAGATCGGGCGAGTGGCGGCGGGTGCACTGTTCCAGCAGAAGAGGCAGACAACACCC
AAGGGGACGACGACGGCGATAACAATTTCCAGGGGGCGCAGGATTATTATGTACCCGCTCCTCCGGACGTTAATCTGGGCGCAGATGTCGAGTTTGAGGACGTCCCCATC
ACACCCACAAGCCGACCGAGCACTACAGGGTCCTCGCAGAGTCGGAAGCGGAGCAGAGCATCATATGAAGCGGAAGCCCTTGATATTATGAGGCAGTCAGTGGTTATGCA
AGAGACACAGTTCACGAAGATCGCTGACTGGTCGGACACCCAGGACACACGGGAGTTCAAGAGGCGGGACACGGTTGGGGAGATGCTCCTGGCGCACCCGAAGCTATCGG
ACGACGAGAGAGTATCTCTTATGTGCATCCTCTTCGCCGACCCCAAGATGACGAACATGATGCTCTCGGTGCCACCGACCCTTAGGCTCCGATTCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGTCCGGGCTGTAGTGGCTTCTGTTGGAATGACGAGTTCAAATGCATCGTGGCTGAGAAGGAAGTTTTTGATGTGTGGGTGAAGTCGCACTCTAGTGCCAAGGG
ACTGCTGAACAAGCCATTTCCTCACTACGAGGAACTCGCTTTCGTGTTCGGAAAAGATCGGGCGAGTGGCGGCGGGTGCACTGTTCCAGCAGAAGAGGCAGACAACACCC
AAGGGGACGACGACGGCGATAACAATTTCCAGGGGGCGCAGGATTATTATGTACCCGCTCCTCCGGACGTTAATCTGGGCGCAGATGTCGAGTTTGAGGACGTCCCCATC
ACACCCACAAGCCGACCGAGCACTACAGGGTCCTCGCAGAGTCGGAAGCGGAGCAGAGCATCATATGAAGCGGAAGCCCTTGATATTATGAGGCAGTCAGTGGTTATGCA
AGAGACACAGTTCACGAAGATCGCTGACTGGTCGGACACCCAGGACACACGGGAGTTCAAGAGGCGGGACACGGTTGGGGAGATGCTCCTGGCGCACCCGAAGCTATCGG
ACGACGAGAGAGTATCTCTTATGTGCATCCTCTTCGCCGACCCCAAGATGACGAACATGATGCTCTCGGTGCCACCGACCCTTAGGCTCCGATTCCTCTGA
Protein sequenceShow/hide protein sequence
MFGPGCSGFCWNDEFKCIVAEKEVFDVWVKSHSSAKGLLNKPFPHYEELAFVFGKDRASGGGCTVPAEEADNTQGDDDGDNNFQGAQDYYVPAPPDVNLGADVEFEDVPI
TPTSRPSTTGSSQSRKRSRASYEAEALDIMRQSVVMQETQFTKIADWSDTQDTREFKRRDTVGEMLLAHPKLSDDERVSLMCILFADPKMTNMMLSVPPTLRLRFL