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Lcy09g018230 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g018230
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr09:39584010..39584423
RNA-Seq ExpressionLcy09g018230
SyntenyLcy09g018230
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7821986.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]1.9e-0434.69Show/hide
Query:  LEAITILEGLKQLSESYREYSAMAKPPLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSFSS
        +EA+ +LEG+KQ          M    +++ESDA  VV LLN  + D S + L+I+EI +     + ++F +  R  N++AH LAH   +  NF ++S
Subjt:  LEAITILEGLKQLSESYREYSAMAKPPLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSFSS

XP_006473914.2 uncharacterized protein LOC102629934 [Citrus sinensis]3.0e-0541.43Show/hide
Query:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF
        PL++ESD+ EVV+L++      +EI  +I EI+DR K+   V  ++ PR CN LAH LA+++    +F F
Subjt:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF

XP_024042007.1 uncharacterized protein LOC112099133 [Citrus clementina]3.0e-0541.43Show/hide
Query:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF
        PL++ESD+ EVV+L++      +EI  +I EI+DR K+   V  ++ PR CN LAH LA+++    +F F
Subjt:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF

XP_024046617.1 uncharacterized protein LOC112100972 [Citrus clementina]2.5e-0437.14Show/hide
Query:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF
        P+++ESD+ EVV L++ +    +EI  ++ E+ DR K+   V  +Y PRNCN +AH LA ++    +F +
Subjt:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF

XP_024046691.1 uncharacterized protein LOC112101027 [Citrus clementina]3.5e-0642.86Show/hide
Query:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF
        PL+VESD+ EVV L+N  +   +EI  +  E++DR K+ N V  ++ PR CN LAH LA ++  + +F F
Subjt:  PLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSF

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAAGCTATCACCATTTTAGAAGGACTCAAGCAATTATCAGAGAGTTACAGAGAGTACTCGGCGATGGCTAAGCCTCCGTTGGTGGTGGAATCAGACGCC
GCCGAAGTTGTTAAGCTCCTTAACCACGATTCTGAAGATTGCTCGGAAATTTCGCTGATCATCGACGAGATTGAGGATCGGGCAAAGCAATCGAACGTGGTAGCT
TTCGAGTATTGTCCCAGAAATTGTAATCTTTTGGCGCATAGGCTAGCGCACGTGTCTGCTACTAAAGGCAATTTTTCCTTCAGTTCTTTTGAAATTTCTCAACCC
TTGAGAATGGATTCCGACCAATTTGGTTTTTGTTGTAAAGGCTGGTTTTTCTCCATTTTGGAGAAAGAAGTTGTTGTACCTAACTTTTATTTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAAGCTATCACCATTTTAGAAGGACTCAAGCAATTATCAGAGAGTTACAGAGAGTACTCGGCGATGGCTAAGCCTCCGTTGGTGGTGGAATCAGACGCC
GCCGAAGTTGTTAAGCTCCTTAACCACGATTCTGAAGATTGCTCGGAAATTTCGCTGATCATCGACGAGATTGAGGATCGGGCAAAGCAATCGAACGTGGTAGCT
TTCGAGTATTGTCCCAGAAATTGTAATCTTTTGGCGCATAGGCTAGCGCACGTGTCTGCTACTAAAGGCAATTTTTCCTTCAGTTCTTTTGAAATTTCTCAACCC
TTGAGAATGGATTCCGACCAATTTGGTTTTTGTTGTAAAGGCTGGTTTTTCTCCATTTTGGAGAAAGAAGTTGTTGTACCTAACTTTTATTTCCTTTAA
Protein sequenceShow/hide protein sequence
MLEAITILEGLKQLSESYREYSAMAKPPLVVESDAAEVVKLLNHDSEDCSEISLIIDEIEDRAKQSNVVAFEYCPRNCNLLAHRLAHVSATKGNFSFSSFEISQP
LRMDSDQFGFCCKGWFFSILEKEVVVPNFYFL