; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g019660 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g019660
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr09:44471079..44471985
RNA-Seq ExpressionLcy09g019660
SyntenyLcy09g019660
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3475057.1 reverse transcriptase [Gossypium australe]1.6e-4243.17Show/hide
Query:  DREVEGEFEGL--------NVVLKSMSKFHINATIDSE--VGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPK
        D   EG  EGL         V L+S SK HI+  +  E     WRFTGFYG P   ++  SWNLLRRL+   S PWLV GDFNEI+ S EK GGS+R   
Subjt:  DREVEGEFEGL--------NVVLKSMSKFHINATIDSE--VGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPK

Query:  QMQVFRDAIDESELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFE
        +M+ FR+ ++E +L D+GF G  FTW +    +  ++ERLDR + NA +  LF  AN+ HL   +SDHCP+L++  S    R  AR  +F+FE  WT  E
Subjt:  QMQVFRDAIDESELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFE

Query:  ECKDVVEKGWCRSIRGTRVAKESLVEA
          ++ ++K W  S  GT V K   ++A
Subjt:  ECKDVVEKGWCRSIRGTRVAKESLVEA

KAA3480968.1 reverse transcriptase [Gossypium australe]7.2e-4340.15Show/hide
Query:  RRALGPVAAESHENHMLECPGGGELPGIQGYAPDGARDRSPTGVPVRIEDREVEGEFEG--------LNVVLKSMSKFHINATIDSE--VGQWRFTGFYG
        RR L     E +E  MLE P  GE  G    + + A        P+     E EG   G        L+V LKS SK+HI+  I  E     WRFTGFYG
Subjt:  RRALGPVAAESHENHMLECPGGGELPGIQGYAPDGARDRSPTGVPVRIEDREVEGEFEG--------LNVVLKSMSKFHINATIDSE--VGQWRFTGFYG

Query:  DPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYS
         P    +   W+LL+RL+  S  PWLV GDFNEI+ S EKCGG  R  K+M+VFR+ + + +L D+GF G  +TW +    E  ++ERLDRG+ N  +  
Subjt:  DPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYS

Query:  LFPFANVRHLDFRLSDHCPLLIDA-KSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGWCRSIRGTRVAKESL
        LFP  +++HL + +SDHCPLL++  K V    GR     F FE  WT  +  ++V+ + W    R TR  KE L
Subjt:  LFPFANVRHLDFRLSDHCPLLIDA-KSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGWCRSIRGTRVAKESL

KAF4379607.1 hypothetical protein F8388_023624 [Cannabis sativa]2.1e-4244.19Show/hide
Query:  EVEGEFEGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDE
        EVEG   G  V +KS S  HI+A +     + WRFTGFYG+P  +SR  SW LL RL  L +LPW+ GGDFNEI+   EK GG+ RS   M  F+ A+D+
Subjt:  EVEGEFEGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDE

Query:  SELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGWC
          L DMG+ G  FTW  +R     VQERLDR  CN  ++ LFP  NV   DF  SDH P++   ++V   + + +K  FRFE  W + EEC D+V + W 
Subjt:  SELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGWC

Query:  RSIRGTRVAKESLVE
            G   ++ES+++
Subjt:  RSIRGTRVAKESLVE

XP_028073297.1 uncharacterized protein LOC114275455 [Camellia sinensis]4.7e-4242.79Show/hide
Query:  EGLNVVLKSMSKFHINATIDSEVGQ--WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTD
        EG+ V +KS S  HI+  +D+ +G+  WRFTGFYG P++A R  SW LLR+LS    +PWL  GDFNEI+ S+EKCG   RSP +M+ FR+ I ++ L D
Subjt:  EGLNVVLKSMSKFHINATIDSEVGQ--WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTD

Query:  MGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSW--FRFEEVWTQFEECKDVVEKGWCRSI
        +GF GP+FTW   R    +V+ERLD G  N  +  LFP A V  +    SDH P+ +D     + R      +  +RFE +W +   C+ +V   W  S 
Subjt:  MGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSW--FRFEEVWTQFEECKDVVEKGWCRSI

Query:  R
        R
Subjt:  R

XP_038688711.1 uncharacterized protein LOC119987879 [Tripterygium wilfordii]6.1e-4246.39Show/hide
Query:  EGLNVVLKSMSKFHINATID--SEVGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTD
        EG +V LKS S  HI+       E   WR TGFYG P    R +SWNLLRRL   SSLPWLV GDFNEI+DS EK GG VR  + M  F+  +++ +L D
Subjt:  EGLNVVLKSMSKFHINATID--SEVGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTD

Query:  MGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW
        +G++G  FTW   R ++ V+ ER+DR + +A + +LFP A V H+   +SDH P+L+D+   P      R+  FRFEE+WT+ E   +VV++GW
Subjt:  MGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW

TrEMBL top hitse value%identityAlignment
A0A2N9FNH6 Reverse transcriptase domain-containing protein2.9e-4547.67Show/hide
Query:  EGLNVVLKSMSKFHINATIDS-EVGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM
        EG+ V   S S  HI+ TI S    +W FTGFYG+PD + R  SW LLRRL     +PWLV GDFNE++D+ EK G   R   QM+ FR A+ + EL DM
Subjt:  EGLNVVLKSMSKFHINATIDS-EVGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM

Query:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW
        G+ G  FTW+  R     V ERLDRG+C+A ++SLFP A +RH+ F  SDH  L++D  S    RG+     FRFE +W Q E C++VV + W
Subjt:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW

A0A2N9HWM9 Reverse transcriptase domain-containing protein4.4e-4645.08Show/hide
Query:  EGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM
        + +++ ++S SK HI+  +D+  G+ WRFTGFYGDPD A R HSW LLRRL G+S+  WLV GDFNEI  S EK G   R P+QM  FR+ +++  LTD+
Subjt:  EGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM

Query:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW
        GF G  FTW   R++   V ERLDRG+    +  LFP A ++H  F  SDH  LL++  +V +   + +K  F FE  W + E C++V+ + W
Subjt:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW

A0A2N9J3U0 Reverse transcriptase domain-containing protein2.9e-4547.67Show/hide
Query:  EGLNVVLKSMSKFHINATIDS-EVGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM
        EG+ V   S S  HI+ TI S    +W FTGFYG+PD + R  SW LLRRL     +PWLV GDFNE++D+ EK G   R   QM+ FR A+ + EL DM
Subjt:  EGLNVVLKSMSKFHINATIDS-EVGQWRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM

Query:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW
        G+ G  FTW+  R     V ERLDRG+C+A ++SLFP A +RH+ F  SDH  L++D  S    RG+     FRFE +W Q E C++VV + W
Subjt:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW

A0A2N9J5D9 CCHC-type domain-containing protein7.5e-4645.08Show/hide
Query:  EGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM
        + +++ ++S SK HI+  +D+  G+ WRFTGFYGDPD A R HSW LLRRL G+S+  WLV GDFNEI  S EK G   R P QM  FR+ +++  LTD+
Subjt:  EGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM

Query:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW
        GF G  FTW   R++   V ERLDRG+    +  LFP A ++H  F  SDH  LL++  +V +   + +K  F FE  W + E C++V+ + W
Subjt:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW

A0A2N9J6I3 Uncharacterized protein2.2e-4544.56Show/hide
Query:  EGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM
        + +++ ++S SK HI+  +D+  G+ WR TGFYGDPD A R HSW LLRRL G+S+  WLV GDFNEI  S EK G   R P+QM  FR+ +++  LTD+
Subjt:  EGLNVVLKSMSKFHINATIDSEVGQ-WRFTGFYGDPDVASRGHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDM

Query:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW
        GF G  FTW   R++   V ERLDRG+    +  LFP A ++H  F  SDH  LL++  +V +   + +K  F FE  W + E C++V+ + W
Subjt:  GFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40390.1 DNAse I-like superfamily protein5.0e-1028.17Show/hide
Query:  ASRGHSWNLLRRLSGLSSL---PWLVGGDFNEIVDSKEKCG--GSVRSPKQMQVFRDAIDESELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFY
        A R   W+ + RLS  S L   PWLV GDFN+I    E      S  S + ++  +  + +S+L D+  +G L+TW   +    +++ +LDR + N  + 
Subjt:  ASRGHSWNLLRRLSGLSSL---PWLVGGDFNEIVDSKEKCG--GSVRSPKQMQVFRDAIDESELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFY

Query:  SLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRF
        + FP A+        SDH   ++   + P    +    +F F
Subjt:  SLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRF

AT1G43760.1 DNAse I-like superfamily protein1.2e-0822.99Show/hide
Query:  SMSKFHINATIDSEVGQWRFTGFYGDPDVASRGHSWN------LLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRS--PKQMQVFRDAIDESELTDMG
        S S+ +  A +DS +  WR    Y   ++      W+      + ++   L     ++ GDF++I  + +       S   + ++ F++ + +S+L D+ 
Subjt:  SMSKFHINATIDSEVGQWRFTGFYGDPDVASRGHSWN------LLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRS--PKQMQVFRDAIDESELTDMG

Query:  FKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRF
         +G  +TW   +D   +++ +LDR + N  ++S FP A        +SDH P +I  +++P    +  K  FR+
Subjt:  FKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDFRLSDHCPLLIDAKSVPNCRGRARKSWFRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGTATGGGAGAAGAAAGAGCGACGAGCCCTAGGACCCGTGGCCGCCGAGAGCCATGAAAATCATATGCTGGAATGTCCGGGGGGTGGGGAGCTCCCGGGC
ATTCAAGGATATGCACCAGATGGTGCAAGAGATAGATCCCCAACTGGTGTTCCTGTCAGAATCGAAGATAGGGAAGTAGAAGGCGAGTTTGAGGGGCTGAATGTG
GTACTGAAATCAATGAGCAAGTTCCATATAAATGCTACAATTGATTCAGAGGTGGGTCAGTGGAGGTTTACGGGCTTCTATGGGGACCCGGATGTGGCAAGCAGA
GGTCATTCGTGGAATCTCCTTAGAAGGCTCAGCGGCTTGTCATCGTTGCCATGGCTTGTAGGGGGAGATTTTAATGAGATAGTGGACTCAAAAGAGAAGTGTGGA
GGTTCTGTTAGGAGTCCGAAACAAATGCAAGTATTTCGGGATGCGATTGATGAGAGTGAGCTAACTGATATGGGCTTCAAGGGCCCTCTTTTCACCTGGTATAAG
CGGAGGGATAGGGAGGTGGTGGTGCAAGAGAGGCTAGACCGAGGGATGTGTAATGCAGGTTTCTACTCTTTGTTTCCCTTCGCAAATGTCAGGCATCTTGATTTC
CGTCTATCTGACCATTGCCCTTTACTGATAGACGCTAAATCTGTGCCGAATTGTCGAGGTCGTGCGAGGAAATCCTGGTTTCGTTTTGAGGAGGTGTGGACCCAG
TTTGAGGAATGCAAGGATGTGGTGGAGAAAGGGTGGTGTCGGTCTATCAGGGGGACTAGAGTTGCCAAGGAGTCGTTAGTCGAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAGTATGGGAGAAGAAAGAGCGACGAGCCCTAGGACCCGTGGCCGCCGAGAGCCATGAAAATCATATGCTGGAATGTCCGGGGGGTGGGGAGCTCCCGGGC
ATTCAAGGATATGCACCAGATGGTGCAAGAGATAGATCCCCAACTGGTGTTCCTGTCAGAATCGAAGATAGGGAAGTAGAAGGCGAGTTTGAGGGGCTGAATGTG
GTACTGAAATCAATGAGCAAGTTCCATATAAATGCTACAATTGATTCAGAGGTGGGTCAGTGGAGGTTTACGGGCTTCTATGGGGACCCGGATGTGGCAAGCAGA
GGTCATTCGTGGAATCTCCTTAGAAGGCTCAGCGGCTTGTCATCGTTGCCATGGCTTGTAGGGGGAGATTTTAATGAGATAGTGGACTCAAAAGAGAAGTGTGGA
GGTTCTGTTAGGAGTCCGAAACAAATGCAAGTATTTCGGGATGCGATTGATGAGAGTGAGCTAACTGATATGGGCTTCAAGGGCCCTCTTTTCACCTGGTATAAG
CGGAGGGATAGGGAGGTGGTGGTGCAAGAGAGGCTAGACCGAGGGATGTGTAATGCAGGTTTCTACTCTTTGTTTCCCTTCGCAAATGTCAGGCATCTTGATTTC
CGTCTATCTGACCATTGCCCTTTACTGATAGACGCTAAATCTGTGCCGAATTGTCGAGGTCGTGCGAGGAAATCCTGGTTTCGTTTTGAGGAGGTGTGGACCCAG
TTTGAGGAATGCAAGGATGTGGTGGAGAAAGGGTGGTGTCGGTCTATCAGGGGGACTAGAGTTGCCAAGGAGTCGTTAGTCGAAGCCTAG
Protein sequenceShow/hide protein sequence
MRVWEKKERRALGPVAAESHENHMLECPGGGELPGIQGYAPDGARDRSPTGVPVRIEDREVEGEFEGLNVVLKSMSKFHINATIDSEVGQWRFTGFYGDPDVASR
GHSWNLLRRLSGLSSLPWLVGGDFNEIVDSKEKCGGSVRSPKQMQVFRDAIDESELTDMGFKGPLFTWYKRRDREVVVQERLDRGMCNAGFYSLFPFANVRHLDF
RLSDHCPLLIDAKSVPNCRGRARKSWFRFEEVWTQFEECKDVVEKGWCRSIRGTRVAKESLVEA