; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy09g019860 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g019860
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionWD repeat-containing protein 82
Genome locationChr09:44879049..44892390
RNA-Seq ExpressionLcy09g019860
SyntenyLcy09g019860
Gene Ontology termsGO:0080182 - histone H3-K4 trimethylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048188 - Set1C/COMPASS complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR037867 - COMPASS component Swd2/WDR82


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017777.1 Protein ANTHESIS POMOTING FACTOR 1 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6497.56Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

XP_022935475.1 protein ANTHESIS POMOTING FACTOR 1 isoform X1 [Cucurbita moschata]2.0e-6497.56Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

XP_022935476.1 protein ANTHESIS POMOTING FACTOR 1 isoform X2 [Cucurbita moschata]2.0e-6497.56Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

XP_022983487.1 protein ANTHESIS POMOTING FACTOR 1 [Cucurbita maxima]2.6e-6496.75Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYV+SGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

XP_023528635.1 protein ANTHESIS POMOTING FACTOR 1 isoform X1 [Cucurbita pepo subsp. pepo]2.0e-6497.56Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

TrEMBL top hitse value%identityAlignment
A0A5A7UHC6 WD repeat-containing protein 822.3e-6395.12Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKR E+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAAS+VLTFWIPNT+K TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

A0A6J1DD69 protein ANTHESIS POMOTING FACTOR 12.8e-6496.75Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPN+SK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

A0A6J1F4S5 protein ANTHESIS POMOTING FACTOR 1 isoform X29.5e-6597.56Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

A0A6J1FAR4 protein ANTHESIS POMOTING FACTOR 1 isoform X19.5e-6597.56Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

A0A6J1IZF6 protein ANTHESIS POMOTING FACTOR 11.2e-6496.75Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV
        MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYV+SGSGDGTLHAWNINKRTE+ASWNSHIGVASCLKWAPRRV
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRV

Query:  MFVAASTVLTFWIPNTSKPTGDS
        MFVAASTVLTFWIPNTSK TG+S
Subjt:  MFVAASTVLTFWIPNTSKPTGDS

SwissProt top hitse value%identityAlignment
Q58E77 WD repeat-containing protein 82-B6.0e-1637.27Show/hide
Query:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGF-SLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA
        +KFSNDGK +LL+T    + ++DA+ G     F     S   T+EA+FTPD Q+++ GS DG +H WN     ++A  +  H G  +CL++ P+ + F +
Subjt:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGF-SLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA

Query:  ASTVLTFWIP
        A + + FW+P
Subjt:  ASTVLTFWIP

Q6GL39 WD repeat-containing protein 823.5e-1637.27Show/hide
Query:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGF-SLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA
        +KFSNDGK +L++T    + ++DA+ G     F     S   T+EATFTPD Q+++ GS DG +H WN     ++A  +  H G  +CL++ P+ + F +
Subjt:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGF-SLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA

Query:  ASTVLTFWIP
        A + + FW+P
Subjt:  ASTVLTFWIP

Q6NV31 WD repeat-containing protein 822.7e-1637.27Show/hide
Query:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGF-SLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA
        +KFSNDGK +L++T    + VLDA+ G     F     S    +EA+FTPD Q+++ GS DG +H WN     ++A  +  H G  +CL++ P+ + F +
Subjt:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGF-SLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA

Query:  ASTVLTFWIP
        A + + FW+P
Subjt:  ASTVLTFWIP

Q9LYK6 Protein ANTHESIS POMOTING FACTOR 18.9e-5283.33Show/hide
Query:  AEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRVM
        AEV DIKFSNDGKSMLLTTTNNNIYVLDAY GEK+CGFSLEPS  T IEATFTPDG+YV+SGSGDGTLHAWNI   +E+A W ++IGV SCLKWAPRR M
Subjt:  AEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRVM

Query:  FVAASTVLTFWIPN
        FVAASTVLTFWIPN
Subjt:  FVAASTVLTFWIPN

Q9VLN1 WD repeat-containing protein 826.0e-1635.09Show/hide
Query:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA
        +KFS DGK++L++T  + I ++DA+ G     F+  P +    IEA+F+PD Q++ SGS DG +H WN +   +++  N  H G   C+++ P+ +M  +
Subjt:  IKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWN-SHIGVASCLKWAPRRVMFVA

Query:  ASTVLTFWIPNTSK
        A T + FW+P + +
Subjt:  ASTVLTFWIPNTSK

Arabidopsis top hitse value%identityAlignment
AT3G27640.1 Transducin/WD40 repeat-like superfamily protein6.4e-0526.42Show/hide
Query:  IKFSNDGKSMLLTTT--NNNIYVLDAYGGEK--QCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINK-RTEIASWNSHIGVASCLKWAPRRVM
        +  S D     LT +  +N IY+ +    +K     FS     +  +    +PDG+YV+SGS DG  + W +NK + +      H    + + W+P  + 
Subjt:  IKFSNDGKSMLLTTT--NNNIYVLDAYGGEK--QCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINK-RTEIASWNSHIGVASCLKWAPRRVM

Query:  FVAAST
         VA ++
Subjt:  FVAAST

AT5G14530.1 Transducin/WD40 repeat-like superfamily protein6.3e-5383.33Show/hide
Query:  AEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRVM
        AEV DIKFSNDGKSMLLTTTNNNIYVLDAY GEK+CGFSLEPS  T IEATFTPDG+YV+SGSGDGTLHAWNI   +E+A W ++IGV SCLKWAPRR M
Subjt:  AEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRVM

Query:  FVAASTVLTFWIPN
        FVAASTVLTFWIPN
Subjt:  FVAASTVLTFWIPN

AT5G66240.1 Transducin/WD40 repeat-like superfamily protein4.0e-2342.86Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRR
        ++E   +KFSNDG+ MLLTT +  I+VLD++ G     FS++P +  +T++A F+P+G +VVSGSGDG+ HAW +    ++ SW         +KW P  
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRR

Query:  VMFVAASTVLTFWIPNTSK
         MFV  S+ L F IP+ SK
Subjt:  VMFVAASTVLTFWIPNTSK

AT5G66240.2 Transducin/WD40 repeat-like superfamily protein4.0e-2342.86Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRR
        ++E   +KFSNDG+ MLLTT +  I+VLD++ G     FS++P +  +T++A F+P+G +VVSGSGDG+ HAW +    ++ SW         +KW P  
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRR

Query:  VMFVAASTVLTFWIPNTSK
         MFV  S+ L F IP+ SK
Subjt:  VMFVAASTVLTFWIPNTSK

AT5G66240.3 Transducin/WD40 repeat-like superfamily protein1.9e-2041.18Show/hide
Query:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRR
        ++E   +KFSNDG+ MLLTT +  I+VLD++ G     FS++P +  +T++A F+P+G +VV  SGDG+ HAW +    ++ SW         +KW P  
Subjt:  MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEP-SPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRR

Query:  VMFVAASTVLTFWIPNTSK
         MFV  S+ L F IP+ SK
Subjt:  VMFVAASTVLTFWIPNTSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGTCTTTGATATCAAATTTAGCAACGATGGCAAATCTATGCTCTTGACAACTACAAATAACAATATCTATGTTCTTGATGCATACGGAGGAGAGAAG
CAATGTGGGTTCAGCTTGGAACCATCTCCCAACACAACCATAGAGGCTACCTTTACCCCAGATGGTCAATACGTCGTATCAGGCTCAGGAGATGGAACCTTGCAT
GCGTGGAACATTAACAAGCGAACTGAGATTGCAAGCTGGAACAGTCACATAGGCGTTGCCTCGTGCTTGAAATGGGCTCCTCGCAGGGTCATGTTCGTTGCCGCC
TCCACTGTTCTCACTTTTTGGATTCCCAACACTTCCAAGCCTACAGGCGATTCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGGTCTTTGATATCAAATTTAGCAACGATGGCAAATCTATGCTCTTGACAACTACAAATAACAATATCTATGTTCTTGATGCATACGGAGGAGAGAAG
CAATGTGGGTTCAGCTTGGAACCATCTCCCAACACAACCATAGAGGCTACCTTTACCCCAGATGGTCAATACGTCGTATCAGGCTCAGGAGATGGAACCTTGCAT
GCGTGGAACATTAACAAGCGAACTGAGATTGCAAGCTGGAACAGTCACATAGGCGTTGCCTCGTGCTTGAAATGGGCTCCTCGCAGGGTCATGTTCGTTGCCGCC
TCCACTGTTCTCACTTTTTGGATTCCCAACACTTCCAAGCCTACAGGCGATTCGGCTTAA
Protein sequenceShow/hide protein sequence
MAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSLEPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRTEIASWNSHIGVASCLKWAPRRVMFVAA
STVLTFWIPNTSKPTGDSA