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Lcy09g020000 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy09g020000
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr09:45131068..45131721
RNA-Seq ExpressionLcy09g020000
SyntenyLcy09g020000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4391414.1 hypothetical protein F8388_008025 [Cannabis sativa]2.4e-0832.09Show/hide
Query:  WSLWNARNGLKFQ-DLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFLQD-LGEN-----IDLAEAHVVIEGVCLS
        W +W  RN L FQ     +H    WA++ +  F      V  SR     +   +W PPP DY  +N DA  +QD +G       ++LAEA  +  GV L+
Subjt:  WSLWNARNGLKFQ-DLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFLQD-LGEN-----IDLAEAHVVIEGVCLS

Query:  HHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVL
        H +     ++ +D   V+N L   S   SD G+L
Subjt:  HHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVL

KJB20572.1 hypothetical protein B456_003G154500 [Gossypium raimondii]5.6e-1031.97Show/hide
Query:  VFVWSLWNARNGLKFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL---------------------QDLGE
        V +W++W +RN  KF     +  L E    +I +F +   S   S   P  RS V+W PPP  YFK+NVDAG                        +L  
Subjt:  VFVWSLWNARNGLKFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL---------------------QDLGE

Query:  NIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSD
        ++ +AEA  V++G+  +  MGF  +++ESDS+ V+N +   S+D S+
Subjt:  NIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSD

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]8.7e-1132.93Show/hide
Query:  VFVWSLWNARNGLKFQDLSP--LHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPV-RWQPPPGDYFKVNVDAGF------------LQDLGEN-----
        VF+W++WNARN   F +     L ++ +W   Y+  +Q A            R   V  W PP   +FKVNVDA F            ++D   N     
Subjt:  VFVWSLWNARNGLKFQDLSP--LHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPV-RWQPPPGDYFKVNVDAGF------------LQDLGEN-----

Query:  ---------IDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLISHFR
                 + LAE     EGVCL+   G  P  IE+DS  V NLL    +D S++GVL S  R
Subjt:  ---------IDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLISHFR

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]1.5e-1032.84Show/hide
Query:  LGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL-------------QDLG-------------ENIDLAEAHVVIEGVCLSH
        L EWANKY+  F+ A+ +    R      + V W PP    +K+N DA FL              D G             +++D+AEA V +EG+ L+ 
Subjt:  LGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL-------------QDLG-------------ENIDLAEAHVVIEGVCLSH

Query:  HMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLI
         +G  P+++E+DS  + NL S PS+DLS+ G ++
Subjt:  HMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLI

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]9.6e-1031.9Show/hide
Query:  VFVWSLWNARNGL--KFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVR---WQPPPGDYFKVNVDAGFLQD-------------------
        V +W++WNARN     F     L DL  W+  Y+  +Q A  S   S S  +   P R   W+PP     KVNVDA F ++                   
Subjt:  VFVWSLWNARNGL--KFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVR---WQPPPGDYFKVNVDAGFLQD-------------------

Query:  -------LGENIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLIS
                  ++D  E   V EG+ L+   GF    IE+DS  + NLL+    D S+VGVL S
Subjt:  -------LGENIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLIS

TrEMBL top hitse value%identityAlignment
A0A0D2MPE5 RNase H domain-containing protein2.7e-1031.97Show/hide
Query:  VFVWSLWNARNGLKFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL---------------------QDLGE
        V +W++W +RN  KF     +  L E    +I +F +   S   S   P  RS V+W PPP  YFK+NVDAG                        +L  
Subjt:  VFVWSLWNARNGLKFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL---------------------QDLGE

Query:  NIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSD
        ++ +AEA  V++G+  +  MGF  +++ESDS+ V+N +   S+D S+
Subjt:  NIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSD

A0A6J1C467 uncharacterized protein LOC1110077754.2e-1132.93Show/hide
Query:  VFVWSLWNARNGLKFQDLSP--LHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPV-RWQPPPGDYFKVNVDAGF------------LQDLGEN-----
        VF+W++WNARN   F +     L ++ +W   Y+  +Q A            R   V  W PP   +FKVNVDA F            ++D   N     
Subjt:  VFVWSLWNARNGLKFQDLSP--LHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPV-RWQPPPGDYFKVNVDAGF------------LQDLGEN-----

Query:  ---------IDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLISHFR
                 + LAE     EGVCL+   G  P  IE+DS  V NLL    +D S++GVL S  R
Subjt:  ---------IDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLISHFR

A0A6J1CIF1 uncharacterized protein LOC1110112377.2e-1132.84Show/hide
Query:  LGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL-------------QDLG-------------ENIDLAEAHVVIEGVCLSH
        L EWANKY+  F+ A+ +    R      + V W PP    +K+N DA FL              D G             +++D+AEA V +EG+ L+ 
Subjt:  LGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFL-------------QDLG-------------ENIDLAEAHVVIEGVCLSH

Query:  HMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLI
         +G  P+++E+DS  + NL S PS+DLS+ G ++
Subjt:  HMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLI

A0A6J1DBJ7 uncharacterized protein LOC1110189734.6e-1031.9Show/hide
Query:  VFVWSLWNARNGL--KFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVR---WQPPPGDYFKVNVDAGFLQD-------------------
        V +W++WNARN     F     L DL  W+  Y+  +Q A  S   S S  +   P R   W+PP     KVNVDA F ++                   
Subjt:  VFVWSLWNARNGL--KFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVR---WQPPPGDYFKVNVDAGFLQD-------------------

Query:  -------LGENIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLIS
                  ++D  E   V EG+ L+   GF    IE+DS  + NLL+    D S+VGVL S
Subjt:  -------LGENIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLIS

A0A7J6H836 RNase H domain-containing protein1.1e-0832.09Show/hide
Query:  WSLWNARNGLKFQ-DLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFLQD-LGEN-----IDLAEAHVVIEGVCLS
        W +W  RN L FQ     +H    WA++ +  F      V  SR     +   +W PPP DY  +N DA  +QD +G       ++LAEA  +  GV L+
Subjt:  WSLWNARNGLKFQ-DLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFLQD-LGEN-----IDLAEAHVVIEGVCLS

Query:  HHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVL
        H +     ++ +D   V+N L   S   SD G+L
Subjt:  HHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein7.3e-0827.38Show/hide
Query:  VWSLWNARNGLKFQD--LSP-------LHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFLQD-----LGENIDLAEAHV
        +W LW +RN   FQ    SP       + D  EW N    T +  ++ V  +     RR   +W PPP  + K N D+G+ Q       G  I     H+
Subjt:  VWSLWNARNGLKFQD--LSP-------LHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRWQPPPGDYFKVNVDAGFLQD-----LGENIDLAEAHV

Query:  VIEG-------VCLSH--------------HMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLISHFR
        V+ G        C  H                G R +  ESDS+ ++ L+++  +D S +G LI   R
Subjt:  VIEG-------VCLSH--------------HMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLISHFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTCATATTTTCTGGTTTTGCAAGATTGCTCGCTCCCAGTGGAAAAGCTCTCAATTCTGGCACATTTGGTCACCCAGACCTGCTGCTAATTTTTCTCTACTTCTC
ATGGACTGTCAAGAGCCTTTGTGTGGTCGGATTTCGCTGTTCTTGTCGCGTTTTTGTATGGTCTCTATGGAATGCTCGAAATGGTTTGAAATTTCAAGATCTCTCTCCGT
TGCATGATCTTGGTGAGTGGGCGAATAAGTACATTCATACCTTTCAGGTTGCTGACTTGTCTGTCTGTTTCAGTCGGTCCCCACCGCTCAGGCGTTCTCCGGTTCGCTGG
CAGCCCCCTCCAGGCGATTATTTCAAGGTCAATGTAGATGCTGGTTTCCTCCAGGATCTTGGTGAGAATATTGATTTGGCTGAGGCTCATGTCGTTATAGAAGGTGTTTG
TCTATCTCATCATATGGGTTTTCGACCAATTATGATCGAATCAGACTCCCAACATGTGATTAATCTTCTCTCCGATCCGTCGGATGACTTGTCTGACGTTGGCGTTCTTA
TCTCTCACTTTCGACGGAGTCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTCATATTTTCTGGTTTTGCAAGATTGCTCGCTCCCAGTGGAAAAGCTCTCAATTCTGGCACATTTGGTCACCCAGACCTGCTGCTAATTTTTCTCTACTTCTC
ATGGACTGTCAAGAGCCTTTGTGTGGTCGGATTTCGCTGTTCTTGTCGCGTTTTTGTATGGTCTCTATGGAATGCTCGAAATGGTTTGAAATTTCAAGATCTCTCTCCGT
TGCATGATCTTGGTGAGTGGGCGAATAAGTACATTCATACCTTTCAGGTTGCTGACTTGTCTGTCTGTTTCAGTCGGTCCCCACCGCTCAGGCGTTCTCCGGTTCGCTGG
CAGCCCCCTCCAGGCGATTATTTCAAGGTCAATGTAGATGCTGGTTTCCTCCAGGATCTTGGTGAGAATATTGATTTGGCTGAGGCTCATGTCGTTATAGAAGGTGTTTG
TCTATCTCATCATATGGGTTTTCGACCAATTATGATCGAATCAGACTCCCAACATGTGATTAATCTTCTCTCCGATCCGTCGGATGACTTGTCTGACGTTGGCGTTCTTA
TCTCTCACTTTCGACGGAGTCTGTAA
Protein sequenceShow/hide protein sequence
MFFIFSGFARLLAPSGKALNSGTFGHPDLLLIFLYFSWTVKSLCVVGFRCSCRVFVWSLWNARNGLKFQDLSPLHDLGEWANKYIHTFQVADLSVCFSRSPPLRRSPVRW
QPPPGDYFKVNVDAGFLQDLGENIDLAEAHVVIEGVCLSHHMGFRPIMIESDSQHVINLLSDPSDDLSDVGVLISHFRRSL