; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy10g005100 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy10g005100
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationChr10:13961174..13961788
RNA-Seq ExpressionLcy10g005100
SyntenyLcy10g005100
Gene Ontology termsGO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049700.1 T4.5 [Cucumis melo var. makuwa]4.0e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

KAG6588985.1 Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4456.93Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I+KK +ESI+ Y+KRIKE+KDKLANVS ++++ED+LIYALN LP+ +NTFRTSMRTRS  VTF+ELH+LLKAEE+A+ KQ+K+DD   QP+A+  
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHG-RGFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S  +   S  S  + NF RGR  GRGR  GHG   F+  GRG      G  S   Q        SCQIC R GH A+D FNRMNY+F GRHPP  LA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHG-RGFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

XP_008448007.1 PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]4.0e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

XP_008448008.1 PREDICTED: uncharacterized protein LOC103490319 isoform X3 [Cucumis melo]4.0e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

XP_016900446.1 PREDICTED: uncharacterized protein LOC103490319 isoform X1 [Cucumis melo]4.0e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

TrEMBL top hitse value%identityAlignment
A0A1S3BI58 uncharacterized protein LOC103490319 isoform X21.9e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

A0A1S3BIR3 uncharacterized protein LOC103490319 isoform X31.9e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

A0A1S4DWT9 uncharacterized protein LOC103490319 isoform X11.9e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

A0A5D3CLI6 T4.51.9e-4657.43Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQ+I KKP+ESI+ Y+KRIKE+KDKLANVS  ++EED+LIYALN LP+ +NTFRTSMRTRSQ VTF+ELH+LL+AEE+A+ KQ+K DD+  QP+ + +
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S +    S       NF RG  +G G++ GHGR  F+        Q RG  SSP Q S      +CQIC R GH+A+D FNRMNY+FQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGR-GFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  AS
        AS
Subjt:  AS

A0A6J1D9L6 uncharacterized protein LOC1110188921.4e-4153.23Show/hide
Query:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV
        S LQSI KK  ESI+ YVKRIKE+KDK ANVS+ +++E +LIYALN L + +NT  TSMRTR+QSV+F+ELH+ +K+EE+AIEKQ K++D +TQP+A+F 
Subjt:  SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFV

Query:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGRGFNPSGRGNFNQGRGIFSSPAQSS-DGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV
        S       Q  N +  F   +S  RGR + +GRG         NQGRG  S    +S     R  CQIC + GH+A+D +NRMN+HFQGRHPP QLA MV
Subjt:  SQTTPNPSQRSNSSGNFSRGRSSGRGRNQGHGRGFNPSGRGNFNQGRGIFSSPAQSS-DGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMV

Query:  A
        A
Subjt:  A

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCACATCTTCAATCAATAACCAAGAAGCCGAACGAGTCAATCAATGATTATGTTAAACGAATCAAAGAACTCAAGGATAAATTAGCTAATGTTTCTGTTATTATGGATGA
AGAGGATATTCTTATTTATGCCCTAAATGTCTTACCTTCTGTTTTTAACACTTTTCGCACATCTATGAGAACTCGGTCACAGTCGGTTACATTCGATGAGCTACACCTCC
TCTTGAAAGCAGAGGAGGCTGCTATTGAGAAACAAGCGAAGCAAGATGATGCCCTAACTCAGCCTTCTGCCATGTTTGTGTCTCAAACAACACCCAATCCCTCTCAACGT
TCCAACTCCTCTGGAAATTTTAGTCGAGGAAGATCATCTGGTCGTGGACGTAATCAAGGTCATGGTCGTGGATTCAATCCTTCTGGCCGTGGAAATTTTAATCAAGGTAG
AGGCATATTTTCTTCTCCAGCACAGTCTTCTGACGGACAAGGTCGGGTTTCATGTCAAATTTGTCAACGCCCCGGACACAGTGCAATTGATTATTTCAACAGAATGAACT
ATCATTTCCAAGGGCGTCATCCACCTACGCAACTAGCAACCATGGTGGCCTCTCATACAATATAA
mRNA sequenceShow/hide mRNA sequence
TCACATCTTCAATCAATAACCAAGAAGCCGAACGAGTCAATCAATGATTATGTTAAACGAATCAAAGAACTCAAGGATAAATTAGCTAATGTTTCTGTTATTATGGATGA
AGAGGATATTCTTATTTATGCCCTAAATGTCTTACCTTCTGTTTTTAACACTTTTCGCACATCTATGAGAACTCGGTCACAGTCGGTTACATTCGATGAGCTACACCTCC
TCTTGAAAGCAGAGGAGGCTGCTATTGAGAAACAAGCGAAGCAAGATGATGCCCTAACTCAGCCTTCTGCCATGTTTGTGTCTCAAACAACACCCAATCCCTCTCAACGT
TCCAACTCCTCTGGAAATTTTAGTCGAGGAAGATCATCTGGTCGTGGACGTAATCAAGGTCATGGTCGTGGATTCAATCCTTCTGGCCGTGGAAATTTTAATCAAGGTAG
AGGCATATTTTCTTCTCCAGCACAGTCTTCTGACGGACAAGGTCGGGTTTCATGTCAAATTTGTCAACGCCCCGGACACAGTGCAATTGATTATTTCAACAGAATGAACT
ATCATTTCCAAGGGCGTCATCCACCTACGCAACTAGCAACCATGGTGGCCTCTCATACAATATAA
Protein sequenceShow/hide protein sequence
SHLQSITKKPNESINDYVKRIKELKDKLANVSVIMDEEDILIYALNVLPSVFNTFRTSMRTRSQSVTFDELHLLLKAEEAAIEKQAKQDDALTQPSAMFVSQTTPNPSQR
SNSSGNFSRGRSSGRGRNQGHGRGFNPSGRGNFNQGRGIFSSPAQSSDGQGRVSCQICQRPGHSAIDYFNRMNYHFQGRHPPTQLATMVASHTI