; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy10g014190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy10g014190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description50S ribosomal protein L28
Genome locationChr10:42331043..42332488
RNA-Seq ExpressionLcy10g014190
SyntenyLcy10g014190
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001383 - Ribosomal protein L28
IPR026569 - Ribosomal protein L28/L24
IPR034704 - L28p-like
IPR037147 - Ribosomal protein L28/L24 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018806.1 50S ribosomal protein L28, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-6490.54Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV +SGVMAASS+KLHFR+K N ELGFL+SQLSGIKISSNHSLIS SPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_022145908.1 50S ribosomal protein L28, chloroplastic [Momordica charantia]8.1e-6591.89Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MAASV+LG+SP NTSGVMAASST+LHFRTK NSELGFLTSQL GIKISSN+S I  +PISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_022979375.1 50S ribosomal protein L28, chloroplastic [Cucurbita maxima]5.1e-6792.57Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV++SGVMAASS+KLHFRTKPN ELGFL+SQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_023526300.1 50S ribosomal protein L28, chloroplastic [Cucurbita pepo subsp. pepo]2.8e-6591.22Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV +SGVMAASS+KLHFRTKPN ELGFL+SQLSGIKISSNHSLIS SPISAPLRPALQPVARRVCPFTGKKAN+KNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

XP_038885053.1 50S ribosomal protein L28, chloroplastic [Benincasa hispida]3.3e-6692.57Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MAA V+LG +P  +SGVMAASSTKL F TKPNSELGFLTSQL+GIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

TrEMBL top hitse value%identityAlignment
A0A1S3AWK5 50S ribosomal protein L28, chloroplastic3.3e-6490Show/hide
Query:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPIS-APLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL
        MAASV+ G +P  TS GVMA SSTKLHFRTKPNS+LGFL SQLSGIKISSNHSLISPSPIS APLRP+LQP+ARR+CPFTGKKANKKNLVSFSNHKTKKL
Subjt:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPIS-APLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL

Query:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        QFVNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A5A7U1W6 50S ribosomal protein L283.3e-6490Show/hide
Query:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPIS-APLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL
        MAASV+ G +P  TS GVMA SSTKLHFRTKPNS+LGFL SQLSGIKISSNHSLISPSPIS APLRP+LQP+ARR+CPFTGKKANKKNLVSFSNHKTKKL
Subjt:  MAASVMLGMSPVNTS-GVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPIS-APLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKL

Query:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        QFVNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  QFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A6J1CX73 50S ribosomal protein L28, chloroplastic3.9e-6591.89Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MAASV+LG+SP NTSGVMAASST+LHFRTK NSELGFLTSQL GIKISSN+S I  +PISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A6J1E916 50S ribosomal protein L28, chloroplastic1.5e-6490.54Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV +SGVMAASS+KLHFR+K N ELGFL+SQLSGIKISSNHSLIS SPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

A0A6J1IT28 50S ribosomal protein L28, chloroplastic2.4e-6792.57Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
        MA S +LG +PV++SGVMAASS+KLHFRTKPN ELGFL+SQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQF

Query:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        VNLQYKKVWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  VNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

SwissProt top hitse value%identityAlignment
B8HUV7 50S ribosomal protein L284.8e-2064Show/hide
Query:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK
        RVC  TGK+AN    VS S+ +TKKLQ VNLQ+K++WW  GKR+V+LRLSTKALKT+E  GLD+ A++AGIDL K
Subjt:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK

O22795 50S ribosomal protein L28, chloroplastic2.6e-4268.06Show/hide
Query:  MSPVNTSGV---MAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ
        M+ + T G    M +S+  +   T  + ELGFLTSQLSG++IS   S +  + IS P  P +QP VARR+CPFTGKKAN+ N VSFSNHKTKKLQFVNLQ
Subjt:  MSPVNTSGV---MAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ

Query:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        YK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Subjt:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

P30956 50S ribosomal protein L28, chloroplastic6.0e-4776.03Show/hide
Query:  RTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALK
        ++K +SEL F+TSQLSG+KISS H + S +P+S P +P+LQPVARR+CPFTGKK+N+ N VS SNHKTKKLQFVNLQYK++WWEAGKRYVKLRLSTKA+K
Subjt:  RTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALK

Query:  TIEKNGLDAVAKKAGIDLRKE
        TIEKNGLDAVAKKAGIDL K+
Subjt:  TIEKNGLDAVAKKAGIDLRKE

P82245 50S ribosomal protein L28, chloroplastic6.7e-4671.71Show/hide
Query:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPN---SELGFLTSQLSGIKISSNHSL-ISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTK
        MAAS ML  +P N        S  L    KP    SELGFLTSQLSGI+IS +    I   PISAPL+P+LQPVARR+CPFTGKK+NK N VS SNHKTK
Subjt:  MAASVMLGMSPVNTSGVMAASSTKLHFRTKPN---SELGFLTSQLSGIKISSNHSL-ISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTK

Query:  KLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        +LQFVNLQYK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
Subjt:  KLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE

Q8DG62 50S ribosomal protein L282.8e-2064Show/hide
Query:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK
        RVC  TGKKAN    +S S+ +TKKLQ VNLQ+K+VWW  GKR+V+LRLSTKA+KT+E+ GL A AK+AG+DL K
Subjt:  RVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK

Arabidopsis top hitse value%identityAlignment
AT2G33450.1 Ribosomal L28 family1.9e-4368.06Show/hide
Query:  MSPVNTSGV---MAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ
        M+ + T G    M +S+  +   T  + ELGFLTSQLSG++IS   S +  + IS P  P +QP VARR+CPFTGKKAN+ N VSFSNHKTKKLQFVNLQ
Subjt:  MSPVNTSGV---MAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQP-VARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQ

Query:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE
        YK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+
Subjt:  YKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTCCGTAATGTTAGGAATGTCGCCGGTGAATACTTCCGGCGTCATGGCAGCATCATCAACCAAACTTCACTTCAGAACTAAACCCAATTCCGAGCTAGGGTT
TCTCACTTCTCAATTGAGTGGCATCAAAATCTCCTCCAACCACTCGCTCATCTCGCCCTCGCCCATTTCTGCTCCTCTCAGACCTGCGCTTCAACCCGTTGCTCGTAGAG
TTTGTCCCTTTACTGGAAAGAAAGCAAACAAGAAGAACTTGGTTTCTTTCTCCAACCACAAGACCAAGAAGTTGCAGTTTGTAAATCTTCAGTACAAGAAGGTTTGGTGG
GAAGCTGGGAAGCGTTATGTCAAACTACGCTTGTCAACAAAGGCATTGAAGACCATTGAGAAAAATGGACTTGATGCTGTGGCTAAGAAGGCAGGAATTGATCTTCGTAA
GGAATGA
mRNA sequenceShow/hide mRNA sequence
GACAAGATAACGATCACTGAGAACTCTGCTCAGAAACAATGGCAGCTTCCGTAATGTTAGGAATGTCGCCGGTGAATACTTCCGGCGTCATGGCAGCATCATCAACCAAA
CTTCACTTCAGAACTAAACCCAATTCCGAGCTAGGGTTTCTCACTTCTCAATTGAGTGGCATCAAAATCTCCTCCAACCACTCGCTCATCTCGCCCTCGCCCATTTCTGC
TCCTCTCAGACCTGCGCTTCAACCCGTTGCTCGTAGAGTTTGTCCCTTTACTGGAAAGAAAGCAAACAAGAAGAACTTGGTTTCTTTCTCCAACCACAAGACCAAGAAGT
TGCAGTTTGTAAATCTTCAGTACAAGAAGGTTTGGTGGGAAGCTGGGAAGCGTTATGTCAAACTACGCTTGTCAACAAAGGCATTGAAGACCATTGAGAAAAATGGACTT
GATGCTGTGGCTAAGAAGGCAGGAATTGATCTTCGTAAGGAATGATTTGGTAATTCATGACTTCAATTTTACACTTTAAAGTTTGATGAAGATTTGTCTAATTACAAAAT
CATGTTGTATCCTGCTGTTTTTGCCTATCCTTGCTCTTAGTTTTCTGTTTATTTTTAAAGATCACAATATTCTTGTATCTTTGCTTCCCCCATTTGGCAATGAAGCTGGA
ATCCATCCCTTTTCCTTTCTGGGTTTCATGAATGATGCAATTTTTTGAACATGGCTTAAAGATAGAGACAGTAGTGCTTGTTGATATATAATGTGGAGAGCACATAAACT
CTGGTGCAAAACCTGGCTCTGAGAACAGGCTTGACCAGAGAAGGTATCACTTTTAGGCAACTTTAAAGCCTAGATTTTGATGCTTTAGTCAGATTGTTGAAAGCATTTGG
CCTTCCAAATGGTTAATTTGCCCTTGAGAAGAATCCCTCAACCCAGAAGGGGCTGCAGTGTGCTTTAGCAGACGAAGCAATGAAGAAGATAACCCAAATCCTTTGGAAGC
CAGTGGGTTAGCTTCATTTGATGTCACAAGCGAAGGATCCTTCTCGAATGATATGCTAAAACAGCCTGCAAAATTAAGCCCATATATGAATAAGAAGATAGGAAAAAGTT
TGTTGGCTATTA
Protein sequenceShow/hide protein sequence
MAASVMLGMSPVNTSGVMAASSTKLHFRTKPNSELGFLTSQLSGIKISSNHSLISPSPISAPLRPALQPVARRVCPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWW
EAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE