; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy11g001040 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g001040
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr11:1018431..1023364
RNA-Seq ExpressionLcy11g001040
SyntenyLcy11g001040
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006471930.1 uncharacterized protein LOC102617744 [Citrus sinensis]3.0e-1536.99Show/hide
Query:  SHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINE
        S  RW+PPPTN  KLN DA+ + K Q+ G+G +LRDS+G  +  G ++ S +  + F E +AI  GL+   +         +  + VE+D  ++ +L+N 
Subjt:  SHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINE

Query:  EDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
             SEI ++  EI+  K  F  IHF F PR  NA A  LA+ A+
Subjt:  EDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI

XP_015382715.1 uncharacterized protein LOC107175626 [Citrus sinensis]1.0e-1536.05Show/hide
Query:  MSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLIN
        +S  RW+PPP N  KLN DA+ ++K Q+ G+G +LRDS+G  +  G +++S +  + + E +AI  GL+   +         +T + VE+D  ++ +L+N
Subjt:  MSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLIN

Query:  EEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
              SEI ++  EI+  K  F  IHF F PR  NA A  LA+ A+
Subjt:  EEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI

XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]1.0e-1539.16Show/hide
Query:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDE
        +W PP +N+WKLNT+A+W      GGIGWILRD  G  I    R I  + +I +LE+ AI EGL+ I Q +         PI +ESD+L  I L++ + +
Subjt:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDE

Query:  DISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
        D +EI +L EEI ++      +      R  N  A  LAR A+
Subjt:  DISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]8.3e-1836.24Show/hide
Query:  KTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIK
        KTL +  +W PPP + W LN DASWSD   RGGIGWI+R   G  +  G R +    ++K LE  AI+EGL+N+  +       +  P+ +E+D+  +  
Subjt:  KTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIK

Query:  LINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAA
        L+N + ED+++  ++ EEI  L++    + F    R  N  A  LA+ A
Subjt:  LINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAA

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.6e-1640.97Show/hide
Query:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQ-ISTPIFVESDALNIIKLINEED
        RW PP +N+WKLNTDA+W      GGIGWILRD  G  I    R I  + +I +LE+ AI EGL+ I Q +     Q    PI +ESD+L  I L++ + 
Subjt:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQ-ISTPIFVESDALNIIKLINEED

Query:  EDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
        +D +EI +L EEI ++      +      R  N  A  LAR A+
Subjt:  EDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134124.9e-1639.16Show/hide
Query:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDE
        +W PP +N+WKLNT+A+W      GGIGWILRD  G  I    R I  + +I +LE+ AI EGL+ I Q +         PI +ESD+L  I L++ + +
Subjt:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDE

Query:  DISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
        D +EI +L EEI ++      +      R  N  A  LAR A+
Subjt:  DISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI

A0A6J1CQG0 uncharacterized protein LOC1110132169.3e-1540.6Show/hide
Query:  TRESQEKDKEPSKEQQRGNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQV
        TR SQ+ D    + ++  N       M   RW+ PPTN WKLNTDASWS++++ GGIGWIL D  G  +  G  +I  K  I  LEL  I+ GL+ I   
Subjt:  TRESQEKDKEPSKEQQRGNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQV

Query:  YFGNGDQISTPIFVESDALNIIKLINEEDEDIS
              Q  +PI++ESD++ +I+L+ +ED D++
Subjt:  YFGNGDQISTPIFVESDALNIIKLINEEDEDIS

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X18.7e-1344.44Show/hide
Query:  SHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLIN
        +  RW PP +N+WKLNTDA+W       GIGWILRD  G  I  G R I  + +I +LE+ AI EGL+ I Q +         PI +ESD+L  I L++
Subjt:  SHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLIN

A0A6J1DNV9 uncharacterized protein LOC1110224034.0e-1836.24Show/hide
Query:  KTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIK
        KTL +  +W PPP + W LN DASWSD   RGGIGWI+R   G  +  G R +    ++K LE  AI+EGL+N+  +       +  P+ +E+D+  +  
Subjt:  KTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIK

Query:  LINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAA
        L+N + ED+++  ++ EEI  L++    + F    R  N  A  LA+ A
Subjt:  LINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAA

A0A6J1DSV1 uncharacterized protein LOC1110236087.6e-1740.97Show/hide
Query:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQ-ISTPIFVESDALNIIKLINEED
        RW PP +N+WKLNTDA+W      GGIGWILRD  G  I    R I  + +I +LE+ AI EGL+ I Q +     Q    PI +ESD+L  I L++ + 
Subjt:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQ-ISTPIFVESDALNIIKLINEED

Query:  EDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
        +D +EI +L EEI ++      +      R  N  A  LAR A+
Subjt:  EDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52990.1 thioredoxin family protein1.3e-0526.09Show/hide
Query:  PTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEI
        P+   K N DAS  +     G+GW++R+S G+ +  G  +   + + +  E  A++  ++      FG      T +  E D  N+ +LIN +  D   +
Subjt:  PTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEI

Query:  SFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
            + I+     F    F+F  R  N  AD L + AI
Subjt:  SFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.0e-1331.28Show/hide
Query:  DMTRESQEKDKEPSKEQQ---RGNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLK
        ++ R + E  +E S  ++   + + P+++  +S  +W  PP    K NTDA+W  +  R GIGWILR+ SG  + +G R + R  ++   EL+A+   + 
Subjt:  DMTRESQEKDKEPSKEQQ---RGNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLK

Query:  NIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAIS
         + +  +         I  ESDA  ++ L+N  D+    +    E+I++L + F E+ F F PR  N  ADR+AR +IS
Subjt:  NIPQVYFGNGDQISTPIFVESDALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAIS

AT3G23320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-0522.92Show/hide
Query:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDE
        +W  P     K N D S    +Q  G+ WI+R+S G+ ++ G  +   + +IK  E  A++  ++    + +         +  E D + + +LI  ++ 
Subjt:  RWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESDALNIIKLINEEDE

Query:  DISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAIS
        +   + +  E I++    F  + F F  R  N   D LA+ A++
Subjt:  DISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAIS

AT4G29090.1 Ribonuclease H-like superfamily protein2.2e-1632.48Show/hide
Query:  GNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESD
        G +P++    S GRW PPP    K NTDA+W+   +R GIGW+LR+  G    +G R + +  S+   EL+A+   + ++ +  +         +  ESD
Subjt:  GNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPIFVESD

Query:  ALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAIS
        +  +I+++N  DE    +    ++++RL + F E+ FVF PR  N  A+R+AR ++S
Subjt:  ALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAIS

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.4e-0928.99Show/hide
Query:  DKEPSKEQQRGNR---PKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGN
        D   + EQQ GNR   P   T     +W+PP  +  K N DAS  ++    G+GWILR+S G+ I  G  +   + + +  E   ++  +    Q  +G 
Subjt:  DKEPSKEQQRGNR---PKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGN

Query:  GDQISTPIFVESDALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI
        G +    +  E D   I ++IN +  +   +    + I+     F  I F F  R  N  AD LA+ AI
Subjt:  GDQISTPIFVESDALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCTTGTAAAGGACATTAGAGTGAGAAAATTTGAATTTTCTTATAACGCCCTACAAATATGGTTTATTATGGACTTCCACAGATACAACACAGATAAGAGAGA
GGACTGGAAGAAGGCCAAAGGAGATTCTTCTTGGTGGAGGAAAGTAGACCATCATCCCAGAAGCTTCCAACCAGTTTCCGATGAACGGCCGCCGGAGAGCTCGACAAGAG
ATGGTAGCTGGCCGAGGGGAAAAAGTGAACCCAATTCCCAAGACAGCCTAACGGCTAGTGAGATGGCAGAAGGAATGATGGAACTAGAAGAAAGAGAAGACATGACAAGA
GAAAGTCAAGAAAAGGACAAAGAACCTTCAAAGGAACAACAACGAGGCAATCGACCCAAATTAAAGACCCTCATGAGTCACGGAAGATGGACTCCGCCGCCGACTAATAC
GTGGAAATTAAATACGGATGCATCCTGGAGCGACAAGCAGCAGAGAGGTGGAATTGGATGGATACTTCGTGACTCTTCAGGGTCTTCTATAAATCTGGGATTTCGACGCA
TTAGCCGAAAATGGTCCATAAAATTTCTGGAATTGAAGGCGATTGTTGAAGGTCTGAAGAACATACCTCAAGTCTATTTCGGAAATGGCGATCAAATATCCACCCCCATC
TTTGTCGAATCAGACGCGCTAAACATCATCAAGCTTATAAACGAAGAAGATGAGGACATCTCGGAAATCTCCTTCCTCACCGAAGAGATTCGCCGATTGAAGAATCTGTT
TGTTGAGATTCATTTTGTTTTTTGCCCAAGAGCTCTAAACGCAGCTGCCGATCGTCTCGCACGAGCAGCAATTTCCCCCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGCTTGTAAAGGACATTAGAGTGAGAAAATTTGAATTTTCTTATAACGCCCTACAAATATGGTTTATTATGGACTTCCACAGATACAACACAGATAAGAGAGA
GGACTGGAAGAAGGCCAAAGGAGATTCTTCTTGGTGGAGGAAAGTAGACCATCATCCCAGAAGCTTCCAACCAGTTTCCGATGAACGGCCGCCGGAGAGCTCGACAAGAG
ATGGTAGCTGGCCGAGGGGAAAAAGTGAACCCAATTCCCAAGACAGCCTAACGGCTAGTGAGATGGCAGAAGGAATGATGGAACTAGAAGAAAGAGAAGACATGACAAGA
GAAAGTCAAGAAAAGGACAAAGAACCTTCAAAGGAACAACAACGAGGCAATCGACCCAAATTAAAGACCCTCATGAGTCACGGAAGATGGACTCCGCCGCCGACTAATAC
GTGGAAATTAAATACGGATGCATCCTGGAGCGACAAGCAGCAGAGAGGTGGAATTGGATGGATACTTCGTGACTCTTCAGGGTCTTCTATAAATCTGGGATTTCGACGCA
TTAGCCGAAAATGGTCCATAAAATTTCTGGAATTGAAGGCGATTGTTGAAGGTCTGAAGAACATACCTCAAGTCTATTTCGGAAATGGCGATCAAATATCCACCCCCATC
TTTGTCGAATCAGACGCGCTAAACATCATCAAGCTTATAAACGAAGAAGATGAGGACATCTCGGAAATCTCCTTCCTCACCGAAGAGATTCGCCGATTGAAGAATCTGTT
TGTTGAGATTCATTTTGTTTTTTGCCCAAGAGCTCTAAACGCAGCTGCCGATCGTCTCGCACGAGCAGCAATTTCCCCCCTCTGA
Protein sequenceShow/hide protein sequence
MGKLVKDIRVRKFEFSYNALQIWFIMDFHRYNTDKREDWKKAKGDSSWWRKVDHHPRSFQPVSDERPPESSTRDGSWPRGKSEPNSQDSLTASEMAEGMMELEEREDMTR
ESQEKDKEPSKEQQRGNRPKLKTLMSHGRWTPPPTNTWKLNTDASWSDKQQRGGIGWILRDSSGSSINLGFRRISRKWSIKFLELKAIVEGLKNIPQVYFGNGDQISTPI
FVESDALNIIKLINEEDEDISEISFLTEEIRRLKNLFVEIHFVFCPRALNAAADRLARAAISPL