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Lcy11g002020 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g002020
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionLysM domain-containing protein
Genome locationChr11:1897844..1898422
RNA-Seq ExpressionLcy11g002020
SyntenyLcy11g002020
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR018392 - LysM domain
IPR036779 - LysM domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576752.1 hypothetical protein SDJN03_24326, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4582.5Show/hide
Query:  SRTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRE-SSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL
        SRT PPSSR LIDVVSWY A+ LL LILIGSIRE SSSSA+ DDGG MLR NLLT R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGL
Subjt:  SRTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRE-SSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGL

Query:  VIKIISSYKPTKFKLGSETG
        VIKIISS+ P   KLG +TG
Subjt:  VIKIISSYKPTKFKLGSETG

KGN57357.2 hypothetical protein Csa_009741 [Cucumis sativus]1.3e-3980.18Show/hide
Query:  VSISRTRPP--SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDV
        VS+ R+R P  SSRPLIDVVSWY AVGLL LILIGSIRE+SSS      G +LR NL+T RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDV
Subjt:  VSISRTRPP--SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDV

Query:  FPGLVIKIISS
        FPGLVIKII+S
Subjt:  FPGLVIKIISS

XP_008439155.1 PREDICTED: uncharacterized protein LOC103484036 [Cucumis melo]1.5e-4081.42Show/hide
Query:  VSISRTRPP----SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD
        VSI R+R P    SSRPLIDVVSWY AVGLL LILIGSIRE+SSS+ D   G  LR NL+T RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD
Subjt:  VSISRTRPP----SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD

Query:  DVFPGLVIKIISS
        DVFPGLVIKII+S
Subjt:  DVFPGLVIKIISS

XP_022157015.1 uncharacterized protein LOC111023841 [Momordica charantia]3.4e-4077.98Show/hide
Query:  RTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI
        R+  PSSRP  DVVSWY AVG+L LILIGSIRES+ SA   D G + R NL+  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI
Subjt:  RTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI

Query:  KIISSYKPT
        KIISS  P+
Subjt:  KIISSYKPT

XP_022985106.1 uncharacterized protein LOC111483184 [Cucurbita maxima]7.0e-4681.51Show/hide
Query:  SRTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV
        SRT PPSSR LIDVVSWY AV +L LILIGSIRE+SSSA+ DDG  MLR NLLT R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLV
Subjt:  SRTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV

Query:  IKIISSYKPTKFKLGSETG
        IKIISS+ P   KLG +TG
Subjt:  IKIISSYKPTKFKLGSETG

TrEMBL top hitse value%identityAlignment
A0A0A0L5R9 LysM domain-containing protein6.2e-4080.18Show/hide
Query:  VSISRTRPP--SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDV
        VS+ R+R P  SSRPLIDVVSWY AVGLL LILIGSIRE+SSS      G +LR NL+T RPCDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDV
Subjt:  VSISRTRPP--SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDV

Query:  FPGLVIKIISS
        FPGLVIKII+S
Subjt:  FPGLVIKIISS

A0A1S3AXP2 uncharacterized protein LOC1034840367.3e-4181.42Show/hide
Query:  VSISRTRPP----SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD
        VSI R+R P    SSRPLIDVVSWY AVGLL LILIGSIRE+SSS+ D   G  LR NL+T RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD
Subjt:  VSISRTRPP----SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD

Query:  DVFPGLVIKIISS
        DVFPGLVIKII+S
Subjt:  DVFPGLVIKIISS

A0A5A7VAP9 Peptidoglycan-binding LysM domain-containing protein7.3e-4181.42Show/hide
Query:  VSISRTRPP----SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD
        VSI R+R P    SSRPLIDVVSWY AVGLL LILIGSIRE+SSS+ D   G  LR NL+T RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD
Subjt:  VSISRTRPP----SSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPD

Query:  DVFPGLVIKIISS
        DVFPGLVIKII+S
Subjt:  DVFPGLVIKIISS

A0A6J1DRZ3 uncharacterized protein LOC1110238411.6e-4077.98Show/hide
Query:  RTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI
        R+  PSSRP  DVVSWY AVG+L LILIGSIRES+ SA   D G + R NL+  RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI
Subjt:  RTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVI

Query:  KIISSYKPT
        KIISS  P+
Subjt:  KIISSYKPT

A0A6J1J769 uncharacterized protein LOC1114831843.4e-4681.51Show/hide
Query:  SRTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV
        SRT PPSSR LIDVVSWY AV +L LILIGSIRE+SSSA+ DDG  MLR NLLT R CDEIYVVGEGETLHTISDKCGDP+IVERNPHIHDPDDVFPGLV
Subjt:  SRTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV

Query:  IKIISSYKPTKFKLGSETG
        IKIISS+ P   KLG +TG
Subjt:  IKIISSYKPTKFKLGSETG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52790.1 peptidoglycan-binding LysM domain-containing protein4.9e-2149.04Show/hide
Query:  SSRPLIDVVSWYSAVGLLCLILIGSI---RESSSSAADDDGGLMLRANLLTERP-CDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIK
        SS  + + +SWY AV    ++L+ S    +E S+   +     M+       RP CDEIY V EGETL TIS+KCGDP+IVE NPHIHD DD+FPGL+I+
Subjt:  SSRPLIDVVSWYSAVGLLCLILIGSI---RESSSSAADDDGGLMLRANLLTERP-CDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIK

Query:  IISS
        I  S
Subjt:  IISS

AT4G25433.1 peptidoglycan-binding LysM domain-containing protein1.9e-2555.79Show/hide
Query:  DVVSWYSAVGLLCLILIGSIRESSSSAADD----DGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI
        + V+ Y  V LL L L GS++ S+   + +        + R   + ERPC+E+YVVGEG+TLH+IS+KCGDPFIVERNPHIHDPDDVFPGL+IK+
Subjt:  DVVSWYSAVGLLCLILIGSIRESSSSAADD----DGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKI

AT5G62150.1 peptidoglycan-binding LysM domain-containing protein3.7e-2962.11Show/hide
Query:  DVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSY
        D+ +W SAV LL LIL+ S+RE+++S +       +R +  + +PC+EIY+VGEGETLHTI DKCGDPFIVERNPHIHDPDDVFPGLV+KI   Y
Subjt:  DVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTCTCTATTTCCAGAACTAGGCCACCGTCTTCCCGACCCCTAATCGACGTCGTTTCCTGGTACTCCGCCGTGGGTCTCCTGTGCCTGATTCTGATCGGC
TCCATCCGAGAAAGCTCCTCCTCCGCCGCTGACGACGACGGCGGCCTGATGCTCAGAGCGAACTTGCTGACGGAGCGTCCGTGCGATGAGATTTATGTGGTCGGA
GAAGGAGAAACGCTTCACACGATTAGCGACAAGTGCGGTGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGACGTCTTCCCGGGTTTGGTC
ATCAAAATTATCTCCTCTTACAAGCCTACGAAATTCAAATTGGGATCGGAAACTGGTTGA
mRNA sequenceShow/hide mRNA sequence
TAAACTCCAAAAAGAAGAAAAAACCCTCGAAAATTCCCCTCCTCCATGGCCGTCTCTATTTCCAGAACTAGGCCACCGTCTTCCCGACCCCTAATCGACGTCGTT
TCCTGGTACTCCGCCGTGGGTCTCCTGTGCCTGATTCTGATCGGCTCCATCCGAGAAAGCTCCTCCTCCGCCGCTGACGACGACGGCGGCCTGATGCTCAGAGCG
AACTTGCTGACGGAGCGTCCGTGCGATGAGATTTATGTGGTCGGAGAAGGAGAAACGCTTCACACGATTAGCGACAAGTGCGGTGACCCGTTTATCGTGGAGCGG
AACCCGCATATCCATGACCCGGATGACGTCTTCCCGGGTTTGGTCATCAAAATTATCTCCTCTTACAAGCCTACGAAATTCAAATTGGGATCGGAAACTGGTTGA
TTTTTTTTTTCTTTCTTTTCTTTTGAATAAAATAAATCCTGACAAATAATATATATACCCTTCGGAGTTTCAGGCCATTTTATACCCAAAATAATAATAATAATA
ATAAAGTTTAGATTTTTATTTATAATTTCCATGACAGACATAGTTATATCTCGA
Protein sequenceShow/hide protein sequence
MAVSISRTRPPSSRPLIDVVSWYSAVGLLCLILIGSIRESSSSAADDDGGLMLRANLLTERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLV
IKIISSYKPTKFKLGSETG