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Lcy11g004990 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g004990
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description40S ribosomal protein S16
Genome locationChr11:4795210..4796588
RNA-Seq ExpressionLcy11g004990
SyntenyLcy11g004990
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0009809 - lignin biosynthetic process (biological process)
GO:0032259 - methylation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0042409 - caffeoyl-CoA O-methyltransferase activity (molecular function)
InterPro domainsIPR000754 - Ribosomal protein S9
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR020574 - Ribosomal protein S9, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645860.1 hypothetical protein Csa_017052 [Cucumis sativus]2.9e-5599.12Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

XP_004136973.1 40S ribosomal protein S16 [Cucumis sativus]2.9e-5599.12Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

XP_022149351.1 40S ribosomal protein S16-like [Momordica charantia]3.8e-5598.23Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEL+EPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

XP_022989000.1 40S ribosomal protein S16-like [Cucurbita maxima]6.5e-5598.23Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MA+PIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

XP_040987369.1 40S ribosomal protein S16 [Juglans microcarpa x Juglans regia]8.5e-5597.35Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAP+ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

TrEMBL top hitse value%identityAlignment
A0A0A0L6F6 Uncharacterized protein1.4e-5599.12Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

A0A1S3C210 40S ribosomal protein S161.4e-5599.12Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

A0A6J1D637 40S ribosomal protein S161.4e-5599.12Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

A0A6J1FW85 40S ribosomal protein S16-like1.4e-5599.12Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

A0A6J1J781 40S ribosomal protein S16-like1.4e-5599.12Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGR+RFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVRY
        QSKKEIKDILVRY
Subjt:  QSKKEIKDILVRY

SwissProt top hitse value%identityAlignment
O22647 40S ribosomal protein S162.5e-4985.09Show/hide
Query:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVD
        MA P  ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGR+RF GVDMRIRV+GGG TSQIYAIRQSIAKALVA+YQKYVD
Subjt:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVD

Query:  EQSKKEIKDILVRY
        EQ+KKE+KDIL+RY
Subjt:  EQSKKEIKDILVRY

P46293 40S ribosomal protein S164.8e-5395.41Show/hide
Query:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK
        IESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK
Subjt:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK

Query:  EIKDILVRY
        EIKDILV Y
Subjt:  EIKDILVRY

Q42340 40S ribosomal protein S16-31.9e-4986.11Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG++RF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRY
        IKDILVRY
Subjt:  IKDILVRY

Q9SK22 40S ribosomal protein S16-11.5e-4987.04Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG++RF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRY
        IKDILVRY
Subjt:  IKDILVRY

Q9XEK7 40S ribosomal protein S161.8e-4782.88Show/hide
Query:  APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQS
        A +ESVQCFGRKKTAVAVTYC+RGRGLI++   PIELVEPEILR+KA+EP+LLLGR++F+GVDMRIRVKGGG+TSQIYAIRQSIAKALVA++QKYVDEQS
Subjt:  APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQS

Query:  KKEIKDILVRY
        KKEIKD+L+RY
Subjt:  KKEIKDILVRY

Arabidopsis top hitse value%identityAlignment
AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein1.0e-5087.04Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG++RF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRY
        IKDILVRY
Subjt:  IKDILVRY

AT3G04230.1 Ribosomal protein S5 domain 2-like superfamily protein1.1e-4781.48Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG++RF+GVDMRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRY
        IKDIL+RY
Subjt:  IKDILVRY

AT5G18380.1 Ribosomal protein S5 domain 2-like superfamily protein1.4e-5086.11Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG++RF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRY
        IKDILVRY
Subjt:  IKDILVRY

AT5G18380.2 Ribosomal protein S5 domain 2-like superfamily protein1.4e-5086.11Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG++RF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRY
        IKDILVRY
Subjt:  IKDILVRY

AT5G18380.3 Ribosomal protein S5 domain 2-like superfamily protein3.9e-5085.19Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG++RF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRY
        IKDILVR+
Subjt:  IKDILVRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCGATCGAATCGGTGCAATGTTTCGGACGCAAGAAGACGGCGGTGGCTGTCACCTACTGCAAGCGCGGCAGGGGTTTGATTAAGATCAATGGCTGTCCAAT
CGAGCTTGTTGAGCCAGAGATCTTGCGCTTCAAGGCGTACGAGCCCATACTCCTCCTTGGCCGCAACCGTTTCTCTGGTGTCGATATGCGCATCAGAGTGAAAGGCGGAG
GTCACACCTCGCAGATCTACGCCATCCGCCAGAGTATAGCCAAGGCTCTTGTTGCATTCTACCAGAAGTACGTCGATGAGCAGAGCAAGAAGGAGATTAAAGACATTCTG
GTCAGATATTCGAATGATGATTTCAAATGCCTGATTGATGATTACATCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCGATCGAATCGGTGCAATGTTTCGGACGCAAGAAGACGGCGGTGGCTGTCACCTACTGCAAGCGCGGCAGGGGTTTGATTAAGATCAATGGCTGTCCAAT
CGAGCTTGTTGAGCCAGAGATCTTGCGCTTCAAGGCGTACGAGCCCATACTCCTCCTTGGCCGCAACCGTTTCTCTGGTGTCGATATGCGCATCAGAGTGAAAGGCGGAG
GTCACACCTCGCAGATCTACGCCATCCGCCAGAGTATAGCCAAGGCTCTTGTTGCATTCTACCAGAAGTACGTCGATGAGCAGAGCAAGAAGGAGATTAAAGACATTCTG
GTCAGATATTCGAATGATGATTTCAAATGCCTGATTGATGATTACATCAGCTAG
Protein sequenceShow/hide protein sequence
MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRNRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDIL
VRYSNDDFKCLIDDYIS