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Lcy11g009680 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy11g009680
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein, putative, unclassified
Genome locationChr11:10714541..10715650
RNA-Seq ExpressionLcy11g009680
SyntenyLcy11g009680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM01179.2 Putative retroelement [Oryza sativa Japonica Group]2.7e-0942.86Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D SG W  D I + FLP++AE ILNI RL++R  ++ I W PD    FSV+S+Y++AV +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]2.7e-0942.86Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D SG W  D I + FLP++AE ILNI RL++R  ++ I W PD    FSV+S+Y++AV +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

CAH66131.1 OSIGBa0135L04.5 [Oryza sativa]1.7e-0838.54Show/hide
Query:  QDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        +D W+  N S+  I V+ N R K + DL+   G W E ++K  F P++AE IL I RL+ R   + + W PD   +FSV+S+Y +A+++ A   GS
Subjt:  QDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

EEC72938.1 hypothetical protein OsI_06800 [Oryza sativa Indica Group]2.9e-0840.82Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D S  W  D I + FLP++AE ILNI RL++R  ++ I W PD    FSV+S+Y++A+ +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

EEE69144.1 hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]1.7e-0839.18Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVIWDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D SG W  D I   FLP++AE ILNI   +    + + W PD    FSV+S+Y++AV +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVIWDPDPKIIFSVKSSYNVAVKINAARRGS

TrEMBL top hitse value%identityAlignment
B8AFP4 Reverse transcriptase domain-containing protein1.4e-0840.82Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D S  W  D I + FLP++AE ILNI RL++R  ++ I W PD    FSV+S+Y++A+ +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

B9FYJ3 Uncharacterized protein8.4e-0939.18Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVIWDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D SG W  D I   FLP++AE ILNI   +    + + W PD    FSV+S+Y++AV +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVIWDPDPKIIFSVKSSYNVAVKINAARRGS

Q01M84 OSIGBa0135L04.5 protein8.4e-0938.54Show/hide
Query:  QDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        +D W+  N S+  I V+ N R K + DL+   G W E ++K  F P++AE IL I RL+ R   + + W PD   +FSV+S+Y +A+++ A   GS
Subjt:  QDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

Q33AJ4 Retrotransposon protein, putative, unclassified1.3e-0942.86Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D SG W  D I + FLP++AE ILNI RL++R  ++ I W PD    FSV+S+Y++AV +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

Q8S5K1 Putative retroelement1.3e-0942.86Show/hide
Query:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS
        L +D WI  + S+  I  K N R + + DL+D SG W  D I + FLP++AE ILNI RL++R  ++ I W PD    FSV+S+Y++AV +     GS
Subjt:  LEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVI-WDPDPKIIFSVKSSYNVAVKINAARRGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTGCATTGGATGAGTTGGAGCAAGATCATTGGATTAGTGATAATGGTAGCAAAATTTCAATATGGGTCAAGGAAAACTTTAGAGGTAAAACGATTTTG
GATCTGTTGGATGATTCAGGGATGTGGAAAGAAGATCTTATAAAAGAGACTTTTCTTCCCATTGAAGCTGAGACAATTCTAAACATCCCAAGACTCAACACCAGA
ACAGCGAATGAAGTTATATGGGATCCGGACCCGAAAATCATTTTTTCTGTTAAAAGCTCTTACAACGTGGCAGTGAAGATCAATGCTGCTAGGAGAGGAAGCATC
CGGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTGCATTGGATGAGTTGGAGCAAGATCATTGGATTAGTGATAATGGTAGCAAAATTTCAATATGGGTCAAGGAAAACTTTAGAGGTAAAACGATTTTG
GATCTGTTGGATGATTCAGGGATGTGGAAAGAAGATCTTATAAAAGAGACTTTTCTTCCCATTGAAGCTGAGACAATTCTAAACATCCCAAGACTCAACACCAGA
ACAGCGAATGAAGTTATATGGGATCCGGACCCGAAAATCATTTTTTCTGTTAAAAGCTCTTACAACGTGGCAGTGAAGATCAATGCTGCTAGGAGAGGAAGCATC
CGGTTCTAA
Protein sequenceShow/hide protein sequence
MESALDELEQDHWISDNGSKISIWVKENFRGKTILDLLDDSGMWKEDLIKETFLPIEAETILNIPRLNTRTANEVIWDPDPKIIFSVKSSYNVAVKINAARRGSI
RF